Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.19□□□□□ -1.9
CHRNA9Q9UGM1 AP001804.3-201ENST00000525146 880 ntBASIC3.19□□□□□ -1.9
CHRNA9Q9UGM1 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.19□□□□□ -1.9
CHRNA9Q9UGM1 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.19□□□□□ -1.9
CHRNA9Q9UGM1 AC245036.5-201ENST00000596330 847 ntBASIC3.19□□□□□ -1.9
CHRNA9Q9UGM1 AL138880.2-201ENST00000616214 239 ntBASIC3.19□□□□□ -1.9
CHRNA9Q9UGM1 AC006111.3-201ENST00000622137 383 ntBASIC3.19□□□□□ -1.9
CHRNA9Q9UGM1 AL138955.1-201ENST00000622881 1040 ntBASIC3.19□□□□□ -1.9
CHRNA9Q9UGM1 AC034229.5-201ENST00000624258 185 ntBASIC3.19□□□□□ -1.9
CHRNA9Q9UGM1 AC126544.2-201ENST00000625174 749 ntBASIC3.19□□□□□ -1.9
CHRNA9Q9UGM1 AL034408.1-202ENST00000636088 415 ntBASIC3.19□□□□□ -1.9
CHRNA9Q9UGM1 MIR7153-201ENST00000637758 57 ntBASIC3.19□□□□□ -1.9
CHRNA9Q9UGM1 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CHRNA9Q9UGM1 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.19□□□□□ -1.9
CHRNA9Q9UGM1 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.19□□□□□ -1.9
CHRNA9Q9UGM1 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.19□□□□□ -1.9
CHRNA9Q9UGM1 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CHRNA9Q9UGM1 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.19□□□□□ -1.9
CHRNA9Q9UGM1 AC097714.1-201ENST00000511272 1647 ntBASIC3.19□□□□□ -1.9
CHRNA9Q9UGM1 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 MFSD8-233ENST00000641482 4860 ntBASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 FRG1CP-201ENST00000358464 769 ntBASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 MIR30E-201ENST00000362104 92 ntBASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 SNORA1.3-201ENST00000384676 136 ntBASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 MIR134-201ENST00000385258 73 ntBASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 SNORD65.1-201ENST00000390889 71 ntBASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 RNU6-55P-201ENST00000411092 107 ntBASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 RNU6-954P-201ENST00000411355 107 ntBASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 AC092447.6-201ENST00000414578 210 ntBASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 SYF2P2-201ENST00000417620 583 ntBASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 AC122718.1-201ENST00000439448 744 ntBASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 AL357552.1-201ENST00000445254 415 ntBASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 CDC27P1-201ENST00000445384 715 ntBASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 RPL12P26-201ENST00000452430 487 ntBASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 Z82190.1-201ENST00000454534 490 ntBASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 FAM133DP-201ENST00000464802 691 ntBASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 AC092757.1-201ENST00000467293 467 ntBASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 AC015908.1-201ENST00000478739 476 ntBASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 AP000563.1-201ENST00000490865 758 ntBASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 AC010265.1-201ENST00000513509 211 ntBASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 NDUFB9P3-201ENST00000521269 501 ntBASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 AC093331.1-201ENST00000521474 169 ntBASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 MIR3912-201ENST00000577566 105 ntBASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 AP001330.4-201ENST00000604350 154 ntBASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 CYCSP41-201ENST00000616920 296 ntBASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 MIR6076-201ENST00000617521 113 ntBASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 AL512427.1-201ENST00000618593 349 ntBASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 U4.6-201ENST00000621618 127 ntBASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 AL161637.1-201ENST00000622380 412 ntBASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.18□□□□□ -1.9
CHRNA9Q9UGM1 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.17□□□□□ -1.9
CHRNA9Q9UGM1 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CHRNA9Q9UGM1 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CHRNA9Q9UGM1 AP002088.1-201ENST00000382740 395 ntBASIC3.17□□□□□ -1.9
CHRNA9Q9UGM1 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CHRNA9Q9UGM1 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.17□□□□□ -1.9
CHRNA9Q9UGM1 AC109780.2-201ENST00000413467 845 ntBASIC3.17□□□□□ -1.9
CHRNA9Q9UGM1 DBIP2-201ENST00000419076 262 ntBASIC3.17□□□□□ -1.9
CHRNA9Q9UGM1 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.17□□□□□ -1.9
CHRNA9Q9UGM1 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.17□□□□□ -1.9
CHRNA9Q9UGM1 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3.17□□□□□ -1.9
CHRNA9Q9UGM1 MUPP-201ENST00000438111 566 ntBASIC3.17□□□□□ -1.9
CHRNA9Q9UGM1 AP000949.1-201ENST00000438328 629 ntBASIC3.17□□□□□ -1.9
CHRNA9Q9UGM1 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.17□□□□□ -1.9
CHRNA9Q9UGM1 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.17□□□□□ -1.9
CHRNA9Q9UGM1 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CHRNA9Q9UGM1 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.17□□□□□ -1.9
CHRNA9Q9UGM1 RPL21P8-201ENST00000465083 535 ntBASIC3.17□□□□□ -1.9
CHRNA9Q9UGM1 AL672167.3-201ENST00000465951 960 ntBASIC3.17□□□□□ -1.9
CHRNA9Q9UGM1 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.17□□□□□ -1.9
CHRNA9Q9UGM1 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.17□□□□□ -1.9
CHRNA9Q9UGM1 AC069528.1-202ENST00000482888 637 ntBASIC3.17□□□□□ -1.9
CHRNA9Q9UGM1 AC106707.2-201ENST00000484182 374 ntBASIC3.17□□□□□ -1.9
CHRNA9Q9UGM1 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.17□□□□□ -1.9
CHRNA9Q9UGM1 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.17□□□□□ -1.9
CHRNA9Q9UGM1 COX7A2P2-201ENST00000505291 250 ntBASIC3.17□□□□□ -1.9
CHRNA9Q9UGM1 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.17□□□□□ -1.9
CHRNA9Q9UGM1 MTCYBP16-201ENST00000509187 1129 ntBASIC3.17□□□□□ -1.9
CHRNA9Q9UGM1 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CHRNA9Q9UGM1 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms