Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 AC022790.1-201ENST00000522872 204 ntBASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 PHBP17-201ENST00000528576 541 ntBASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 AC107918.3-201ENST00000533272 382 ntBASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 RN7SL652P-201ENST00000577769 300 ntBASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 AC245389.1-201ENST00000605141 529 ntBASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 ACTR3BP1-201ENST00000605584 1247 ntBASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 AL445567.2-201ENST00000618935 498 ntBASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 AC005858.4-201ENST00000623191 700 ntBASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 ASNSP1-201ENST00000518311 1939 ntBASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 AC025031.4-201ENST00000621248 3271 ntBASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
PDLIM7Q9NR12 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.23□□□□□ -1.57
PDLIM7Q9NR12 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PDLIM7Q9NR12 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PDLIM7Q9NR12 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PDLIM7Q9NR12 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
PDLIM7Q9NR12 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PDLIM7Q9NR12 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PDLIM7Q9NR12 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PDLIM7Q9NR12 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PDLIM7Q9NR12 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PDLIM7Q9NR12 AC010266.2-201ENST00000564741 3255 ntBASIC5.23□□□□□ -1.57
PDLIM7Q9NR12 Y_RNA.157-201ENST00000363638 102 ntBASIC5.23□□□□□ -1.57
PDLIM7Q9NR12 RNU6-730P-201ENST00000383954 104 ntBASIC5.23□□□□□ -1.57
PDLIM7Q9NR12 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC5.23□□□□□ -1.57
PDLIM7Q9NR12 E2F6P2-201ENST00000420708 748 ntBASIC5.23□□□□□ -1.57
PDLIM7Q9NR12 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.23□□□□□ -1.57
PDLIM7Q9NR12 CKS1BP6-201ENST00000424932 240 ntBASIC5.23□□□□□ -1.57
PDLIM7Q9NR12 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC5.23□□□□□ -1.57
PDLIM7Q9NR12 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC5.23□□□□□ -1.57
PDLIM7Q9NR12 NUTF2P3-201ENST00000448540 384 ntBASIC5.23□□□□□ -1.57
PDLIM7Q9NR12 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC5.23□□□□□ -1.57
PDLIM7Q9NR12 MTCO3P2-201ENST00000457365 171 ntBASIC5.23□□□□□ -1.57
PDLIM7Q9NR12 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC5.23□□□□□ -1.57
PDLIM7Q9NR12 AC093278.1-201ENST00000494700 600 ntBASIC5.23□□□□□ -1.57
PDLIM7Q9NR12 FTH1P24-201ENST00000503502 462 ntBASIC5.23□□□□□ -1.57
PDLIM7Q9NR12 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC5.23□□□□□ -1.57
PDLIM7Q9NR12 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.23□□□□□ -1.57
PDLIM7Q9NR12 MRPL49P2-201ENST00000521066 465 ntBASIC5.23□□□□□ -1.57
PDLIM7Q9NR12 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.23□□□□□ -1.57
PDLIM7Q9NR12 AC123904.2-201ENST00000548059 300 ntBASIC5.23□□□□□ -1.57
PDLIM7Q9NR12 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC5.23□□□□□ -1.57
PDLIM7Q9NR12 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC5.23□□□□□ -1.57
PDLIM7Q9NR12 AC055876.1-202ENST00000567053 138 ntBASIC5.23□□□□□ -1.57
PDLIM7Q9NR12 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC5.23□□□□□ -1.57
PDLIM7Q9NR12 AL162730.1-201ENST00000605734 292 ntBASIC5.23□□□□□ -1.57
PDLIM7Q9NR12 HSPE1P14-201ENST00000605812 302 ntBASIC5.23□□□□□ -1.57
PDLIM7Q9NR12 AC008966.2-201ENST00000606157 453 ntBASIC5.23□□□□□ -1.57
PDLIM7Q9NR12 OR10AB1P-201ENST00000609613 938 ntBASIC5.23□□□□□ -1.57
PDLIM7Q9NR12 AC138649.5-201ENST00000637456 137 ntBASIC5.23□□□□□ -1.57
PDLIM7Q9NR12 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PDLIM7Q9NR12 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.23□□□□□ -1.57
PDLIM7Q9NR12 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.23□□□□□ -1.57
PDLIM7Q9NR12 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.22□□□□□ -1.57
PDLIM7Q9NR12 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PDLIM7Q9NR12 AP005435.3-201ENST00000531260 3198 ntBASIC5.22□□□□□ -1.57
PDLIM7Q9NR12 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PDLIM7Q9NR12 Y_RNA.166-201ENST00000363730 102 ntBASIC5.22□□□□□ -1.57
PDLIM7Q9NR12 RNU6-744P-201ENST00000365557 107 ntBASIC5.22□□□□□ -1.57
PDLIM7Q9NR12 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PDLIM7Q9NR12 SNORA69-201ENST00000383895 132 ntBASIC5.22□□□□□ -1.57
PDLIM7Q9NR12 RNU6-1316P-201ENST00000384242 108 ntBASIC5.22□□□□□ -1.57
PDLIM7Q9NR12 RNU6-921P-201ENST00000384361 107 ntBASIC5.22□□□□□ -1.57
PDLIM7Q9NR12 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PDLIM7Q9NR12 RN7SKP267-201ENST00000410381 285 ntBASIC5.22□□□□□ -1.57
PDLIM7Q9NR12 RNU6-1068P-201ENST00000410958 103 ntBASIC5.22□□□□□ -1.57
PDLIM7Q9NR12 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC5.22□□□□□ -1.57
PDLIM7Q9NR12 GNG5P5-201ENST00000420444 220 ntBASIC5.22□□□□□ -1.57
PDLIM7Q9NR12 AL356387.2-201ENST00000422272 243 ntBASIC5.22□□□□□ -1.57
PDLIM7Q9NR12 MTCO2P5-201ENST00000422621 426 ntBASIC5.22□□□□□ -1.57
PDLIM7Q9NR12 AC019097.1-201ENST00000424783 735 ntBASIC5.22□□□□□ -1.57
PDLIM7Q9NR12 AL451062.2-201ENST00000427515 271 ntBASIC5.22□□□□□ -1.57
PDLIM7Q9NR12 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC5.22□□□□□ -1.57
PDLIM7Q9NR12 USP9YP15-201ENST00000442391 422 ntBASIC5.22□□□□□ -1.57
PDLIM7Q9NR12 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.22□□□□□ -1.57
PDLIM7Q9NR12 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.22□□□□□ -1.57
PDLIM7Q9NR12 NIPA2P2-201ENST00000496376 1083 ntBASIC5.22□□□□□ -1.57
PDLIM7Q9NR12 RNA5SP249-201ENST00000516127 99 ntBASIC5.22□□□□□ -1.57
PDLIM7Q9NR12 IGLVIV-65-201ENST00000517313 360 ntBASIC5.22□□□□□ -1.57
PDLIM7Q9NR12 SOD1P3-201ENST00000518682 454 ntBASIC5.22□□□□□ -1.57
PDLIM7Q9NR12 AC105029.1-201ENST00000520250 669 ntBASIC5.22□□□□□ -1.57
PDLIM7Q9NR12 AC022690.1-201ENST00000526681 550 ntBASIC5.22□□□□□ -1.57
PDLIM7Q9NR12 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.22□□□□□ -1.57
PDLIM7Q9NR12 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PDLIM7Q9NR12 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC5.22□□□□□ -1.57
PDLIM7Q9NR12 NACA-211ENST00000548563 827 ntTSL 5 BASIC5.22□□□□□ -1.57
PDLIM7Q9NR12 AC008127.2-201ENST00000549925 1075 ntBASIC5.22□□□□□ -1.57
PDLIM7Q9NR12 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.22□□□□□ -1.57
PDLIM7Q9NR12 AC090515.3-201ENST00000560431 315 ntBASIC5.22□□□□□ -1.57
PDLIM7Q9NR12 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC5.22□□□□□ -1.57
PDLIM7Q9NR12 MIR3167-201ENST00000579623 85 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms