Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VTA1Q9NP79 AC005832.2-201ENST00000538921 1430 ntBASIC4.91□□□□□ -1.62
VTA1Q9NP79 Y_RNA.46-201ENST00000362695 102 ntBASIC4.91□□□□□ -1.62
VTA1Q9NP79 Y_RNA.234-201ENST00000364409 97 ntBASIC4.91□□□□□ -1.62
VTA1Q9NP79 SNORD51-201ENST00000384320 80 ntBASIC4.91□□□□□ -1.62
VTA1Q9NP79 MRPL42P2-201ENST00000403169 426 ntBASIC4.91□□□□□ -1.62
VTA1Q9NP79 AL445189.1-201ENST00000405722 338 ntBASIC4.91□□□□□ -1.62
VTA1Q9NP79 RPS20P14-201ENST00000412545 360 ntBASIC4.91□□□□□ -1.62
VTA1Q9NP79 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.91□□□□□ -1.62
VTA1Q9NP79 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.91□□□□□ -1.62
VTA1Q9NP79 AC104651.1-201ENST00000427559 735 ntBASIC4.91□□□□□ -1.62
VTA1Q9NP79 TIMM9P3-201ENST00000428659 274 ntBASIC4.91□□□□□ -1.62
VTA1Q9NP79 AC009961.2-201ENST00000435771 251 ntBASIC4.91□□□□□ -1.62
VTA1Q9NP79 RPL17P49-201ENST00000443728 411 ntBASIC4.91□□□□□ -1.62
VTA1Q9NP79 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.91□□□□□ -1.62
VTA1Q9NP79 Z95327.1-201ENST00000446082 482 ntBASIC4.91□□□□□ -1.62
VTA1Q9NP79 AC073587.1-201ENST00000447093 876 ntBASIC4.91□□□□□ -1.62
VTA1Q9NP79 GAPDHP17-201ENST00000449858 1001 ntBASIC4.91□□□□□ -1.62
VTA1Q9NP79 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.91□□□□□ -1.62
VTA1Q9NP79 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.91□□□□□ -1.62
VTA1Q9NP79 AC005798.1-201ENST00000513715 387 ntBASIC4.91□□□□□ -1.62
VTA1Q9NP79 AC022483.1-201ENST00000514020 567 ntBASIC4.91□□□□□ -1.62
VTA1Q9NP79 RN7SKP244-201ENST00000516513 307 ntBASIC4.91□□□□□ -1.62
VTA1Q9NP79 RNU6-506P-201ENST00000516553 94 ntBASIC4.91□□□□□ -1.62
VTA1Q9NP79 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
VTA1Q9NP79 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.91□□□□□ -1.62
VTA1Q9NP79 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.91□□□□□ -1.62
VTA1Q9NP79 AP003385.6-201ENST00000531603 374 ntBASIC4.91□□□□□ -1.62
VTA1Q9NP79 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.91□□□□□ -1.62
VTA1Q9NP79 AL157394.1-201ENST00000562983 1224 ntBASIC4.91□□□□□ -1.62
VTA1Q9NP79 MIR3913-1-201ENST00000577744 102 ntBASIC4.91□□□□□ -1.62
VTA1Q9NP79 AL161729.3-201ENST00000603533 673 ntBASIC4.91□□□□□ -1.62
VTA1Q9NP79 AP003117.2-201ENST00000606010 545 ntBASIC4.91□□□□□ -1.62
VTA1Q9NP79 AL021997.2-201ENST00000615674 271 ntBASIC4.91□□□□□ -1.62
VTA1Q9NP79 SNX18P1Y-201ENST00000616231 511 ntBASIC4.91□□□□□ -1.62
VTA1Q9NP79 AL161637.1-201ENST00000622380 412 ntBASIC4.91□□□□□ -1.62
VTA1Q9NP79 AC091905.2-201ENST00000623143 306 ntBASIC4.91□□□□□ -1.62
VTA1Q9NP79 AL160394.1-201ENST00000624765 724 ntBASIC4.91□□□□□ -1.62
VTA1Q9NP79 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.91□□□□□ -1.62
VTA1Q9NP79 OR5AK4P-201ENST00000635912 903 ntBASIC4.91□□□□□ -1.62
VTA1Q9NP79 AC010149.2-201ENST00000637608 315 ntBASIC4.91□□□□□ -1.62
VTA1Q9NP79 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
VTA1Q9NP79 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.91□□□□□ -1.62
VTA1Q9NP79 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.91□□□□□ -1.62
VTA1Q9NP79 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
VTA1Q9NP79 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
VTA1Q9NP79 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
VTA1Q9NP79 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
VTA1Q9NP79 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.9□□□□□ -1.62
VTA1Q9NP79 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
VTA1Q9NP79 RNU1-14P-201ENST00000362759 152 ntBASIC4.9□□□□□ -1.63
VTA1Q9NP79 RN7SKP280-201ENST00000364196 304 ntBASIC4.9□□□□□ -1.63
VTA1Q9NP79 RNA5SP175-201ENST00000364275 119 ntBASIC4.9□□□□□ -1.63
VTA1Q9NP79 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
VTA1Q9NP79 U3.29-201ENST00000391296 212 ntBASIC4.9□□□□□ -1.63
VTA1Q9NP79 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
VTA1Q9NP79 AL583835.1-201ENST00000399570 407 ntBASIC4.9□□□□□ -1.63
VTA1Q9NP79 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.9□□□□□ -1.63
VTA1Q9NP79 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.9□□□□□ -1.63
VTA1Q9NP79 PIGFP2-201ENST00000421400 651 ntBASIC4.9□□□□□ -1.63
VTA1Q9NP79 RPS12P5-201ENST00000423449 371 ntBASIC4.9□□□□□ -1.63
VTA1Q9NP79 AL157831.1-201ENST00000426134 473 ntBASIC4.9□□□□□ -1.63
VTA1Q9NP79 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.9□□□□□ -1.63
VTA1Q9NP79 RPL23AP25-201ENST00000430973 463 ntBASIC4.9□□□□□ -1.63
VTA1Q9NP79 AL359073.1-201ENST00000448036 403 ntBASIC4.9□□□□□ -1.63
VTA1Q9NP79 AC093392.2-201ENST00000450682 337 ntBASIC4.9□□□□□ -1.63
VTA1Q9NP79 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.9□□□□□ -1.63
VTA1Q9NP79 RPS3AP17-201ENST00000472594 777 ntBASIC4.9□□□□□ -1.63
VTA1Q9NP79 AC021382.1-201ENST00000483523 359 ntBASIC4.9□□□□□ -1.63
VTA1Q9NP79 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.9□□□□□ -1.63
VTA1Q9NP79 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.9□□□□□ -1.63
VTA1Q9NP79 AC006390.1-201ENST00000508068 283 ntBASIC4.9□□□□□ -1.63
VTA1Q9NP79 MTCO3P44-201ENST00000510977 541 ntBASIC4.9□□□□□ -1.63
VTA1Q9NP79 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.9□□□□□ -1.63
VTA1Q9NP79 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.9□□□□□ -1.63
VTA1Q9NP79 Y_RNA.672-201ENST00000516289 104 ntBASIC4.9□□□□□ -1.63
VTA1Q9NP79 RN7SKP116-201ENST00000516902 319 ntBASIC4.9□□□□□ -1.63
VTA1Q9NP79 RNU6-430P-201ENST00000517078 107 ntBASIC4.9□□□□□ -1.63
VTA1Q9NP79 MTND4LP26-201ENST00000518144 282 ntBASIC4.9□□□□□ -1.63
VTA1Q9NP79 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.9□□□□□ -1.63
VTA1Q9NP79 AC024224.1-201ENST00000538284 609 ntBASIC4.9□□□□□ -1.63
VTA1Q9NP79 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.9□□□□□ -1.63
VTA1Q9NP79 AL161729.4-201ENST00000604650 476 ntBASIC4.9□□□□□ -1.63
VTA1Q9NP79 AL592295.2-201ENST00000612578 206 ntBASIC4.9□□□□□ -1.63
VTA1Q9NP79 AC009159.1-201ENST00000618386 642 ntBASIC4.9□□□□□ -1.63
VTA1Q9NP79 AC136475.10-201ENST00000620253 385 ntBASIC4.9□□□□□ -1.63
VTA1Q9NP79 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.9□□□□□ -1.63
VTA1Q9NP79 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
VTA1Q9NP79 AL592182.3-201ENST00000642132 3304 ntBASIC4.9□□□□□ -1.63
VTA1Q9NP79 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
VTA1Q9NP79 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.89□□□□□ -1.63
VTA1Q9NP79 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.89□□□□□ -1.63
VTA1Q9NP79 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
VTA1Q9NP79 AL133243.3-201ENST00000617415 3004 ntBASIC4.89□□□□□ -1.63
VTA1Q9NP79 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
VTA1Q9NP79 AC095050.2-201ENST00000510748 1458 ntBASIC4.89□□□□□ -1.63
VTA1Q9NP79 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.89□□□□□ -1.63
VTA1Q9NP79 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.89□□□□□ -1.63
VTA1Q9NP79 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
VTA1Q9NP79 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 160.1 ms