Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDH11XQ9BZA7 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PCDH11XQ9BZA7 RN7SL283P-201ENST00000489055 303 ntBASIC3.35□□□□□ -1.87
PCDH11XQ9BZA7 OR9N1P-202ENST00000494289 481 ntBASIC3.35□□□□□ -1.87
PCDH11XQ9BZA7 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.35□□□□□ -1.87
PCDH11XQ9BZA7 AC111193.1-201ENST00000504097 155 ntBASIC3.35□□□□□ -1.87
PCDH11XQ9BZA7 MTCO1P31-201ENST00000506355 492 ntBASIC3.35□□□□□ -1.87
PCDH11XQ9BZA7 AC118282.1-201ENST00000506408 765 ntBASIC3.35□□□□□ -1.87
PCDH11XQ9BZA7 AC119751.1-201ENST00000513357 765 ntBASIC3.35□□□□□ -1.87
PCDH11XQ9BZA7 SNORA48.9-201ENST00000516419 162 ntBASIC3.35□□□□□ -1.87
PCDH11XQ9BZA7 AC100870.1-201ENST00000522035 505 ntBASIC3.35□□□□□ -1.87
PCDH11XQ9BZA7 OR8L1P-201ENST00000534005 955 ntBASIC3.35□□□□□ -1.87
PCDH11XQ9BZA7 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDH11XQ9BZA7 CBX3P2-202ENST00000583365 535 ntBASIC3.35□□□□□ -1.87
PCDH11XQ9BZA7 AC010928.3-201ENST00000587712 541 ntBASIC3.35□□□□□ -1.87
PCDH11XQ9BZA7 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDH11XQ9BZA7 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PCDH11XQ9BZA7 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.34□□□□□ -1.87
PCDH11XQ9BZA7 AC022031.1-201ENST00000585985 2593 ntBASIC3.34□□□□□ -1.87
PCDH11XQ9BZA7 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
PCDH11XQ9BZA7 HSPE1P26-201ENST00000405341 275 ntBASIC3.34□□□□□ -1.87
PCDH11XQ9BZA7 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.34□□□□□ -1.87
PCDH11XQ9BZA7 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.34□□□□□ -1.87
PCDH11XQ9BZA7 AL031736.2-201ENST00000426573 787 ntBASIC3.34□□□□□ -1.87
PCDH11XQ9BZA7 AC011816.1-201ENST00000441346 546 ntBASIC3.34□□□□□ -1.87
PCDH11XQ9BZA7 RPS29P21-201ENST00000496272 170 ntBASIC3.34□□□□□ -1.87
PCDH11XQ9BZA7 RN7SKP82-201ENST00000516786 223 ntBASIC3.34□□□□□ -1.87
PCDH11XQ9BZA7 IGKV2-36-201ENST00000519999 223 ntBASIC3.34□□□□□ -1.87
PCDH11XQ9BZA7 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.34□□□□□ -1.87
PCDH11XQ9BZA7 AP004242.1-201ENST00000533701 349 ntBASIC3.34□□□□□ -1.87
PCDH11XQ9BZA7 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.34□□□□□ -1.87
PCDH11XQ9BZA7 POLR2KP1-201ENST00000553226 168 ntBASIC3.34□□□□□ -1.87
PCDH11XQ9BZA7 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
PCDH11XQ9BZA7 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.34□□□□□ -1.87
PCDH11XQ9BZA7 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.34□□□□□ -1.87
PCDH11XQ9BZA7 BX322635.1-201ENST00000605804 496 ntBASIC3.34□□□□□ -1.87
PCDH11XQ9BZA7 MIR7843-201ENST00000622274 79 ntBASIC3.34□□□□□ -1.87
PCDH11XQ9BZA7 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.34□□□□□ -1.88
PCDH11XQ9BZA7 AC008264.2-201ENST00000610193 3731 ntBASIC3.34□□□□□ -1.88
PCDH11XQ9BZA7 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.34□□□□□ -1.88
PCDH11XQ9BZA7 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
PCDH11XQ9BZA7 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.33□□□□□ -1.88
PCDH11XQ9BZA7 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.33□□□□□ -1.88
PCDH11XQ9BZA7 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.33□□□□□ -1.88
PCDH11XQ9BZA7 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PCDH11XQ9BZA7 RNU6-40P-201ENST00000384254 107 ntBASIC3.33□□□□□ -1.88
PCDH11XQ9BZA7 CCNB2P1-201ENST00000399411 1150 ntBASIC3.33□□□□□ -1.88
PCDH11XQ9BZA7 Z98742.3-201ENST00000418637 326 ntBASIC3.33□□□□□ -1.88
PCDH11XQ9BZA7 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.33□□□□□ -1.88
PCDH11XQ9BZA7 MTND4LP14-201ENST00000429447 288 ntBASIC3.33□□□□□ -1.88
PCDH11XQ9BZA7 TRIM60P13-201ENST00000432350 1283 ntBASIC3.33□□□□□ -1.88
PCDH11XQ9BZA7 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PCDH11XQ9BZA7 RPL30P11-201ENST00000495304 339 ntBASIC3.33□□□□□ -1.88
PCDH11XQ9BZA7 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.33□□□□□ -1.88
PCDH11XQ9BZA7 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.33□□□□□ -1.88
PCDH11XQ9BZA7 RNU6-237P-201ENST00000515985 71 ntBASIC3.33□□□□□ -1.88
PCDH11XQ9BZA7 NOP56P3-201ENST00000549457 385 ntBASIC3.33□□□□□ -1.88
PCDH11XQ9BZA7 OR4T1P-201ENST00000554933 911 ntBASIC3.33□□□□□ -1.88
PCDH11XQ9BZA7 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.33□□□□□ -1.88
PCDH11XQ9BZA7 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.33□□□□□ -1.88
PCDH11XQ9BZA7 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC3.33□□□□□ -1.88
PCDH11XQ9BZA7 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.33□□□□□ -1.88
PCDH11XQ9BZA7 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.33□□□□□ -1.88
PCDH11XQ9BZA7 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.33□□□□□ -1.88
PCDH11XQ9BZA7 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.33□□□□□ -1.88
PCDH11XQ9BZA7 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.33□□□□□ -1.88
PCDH11XQ9BZA7 CR381653.2-201ENST00000624041 768 ntBASIC3.33□□□□□ -1.88
PCDH11XQ9BZA7 AC048347.1-201ENST00000624621 427 ntBASIC3.33□□□□□ -1.88
PCDH11XQ9BZA7 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.32□□□□□ -1.88
PCDH11XQ9BZA7 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PCDH11XQ9BZA7 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PCDH11XQ9BZA7 METTL21EP-201ENST00000298105 713 ntBASIC3.32□□□□□ -1.88
PCDH11XQ9BZA7 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PCDH11XQ9BZA7 MIR504-201ENST00000385065 83 ntBASIC3.32□□□□□ -1.88
PCDH11XQ9BZA7 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.32□□□□□ -1.88
PCDH11XQ9BZA7 AC010385.1-201ENST00000412374 256 ntBASIC3.32□□□□□ -1.88
PCDH11XQ9BZA7 AL135786.1-201ENST00000415892 214 ntBASIC3.32□□□□□ -1.88
PCDH11XQ9BZA7 TRIAP1P1-201ENST00000427062 225 ntBASIC3.32□□□□□ -1.88
PCDH11XQ9BZA7 ZNF965P-201ENST00000432501 817 ntBASIC3.32□□□□□ -1.88
PCDH11XQ9BZA7 XKRY2-201ENST00000442362 1093 ntBASIC3.32□□□□□ -1.88
PCDH11XQ9BZA7 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.32□□□□□ -1.88
PCDH11XQ9BZA7 AL590399.6-201ENST00000446396 307 ntBASIC3.32□□□□□ -1.88
PCDH11XQ9BZA7 snoU13.15-201ENST00000459407 104 ntBASIC3.32□□□□□ -1.88
PCDH11XQ9BZA7 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.32□□□□□ -1.88
PCDH11XQ9BZA7 IGKV3-31-201ENST00000523109 329 ntBASIC3.32□□□□□ -1.88
PCDH11XQ9BZA7 AL133271.1-201ENST00000538229 291 ntBASIC3.32□□□□□ -1.88
PCDH11XQ9BZA7 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.32□□□□□ -1.88
PCDH11XQ9BZA7 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.32□□□□□ -1.88
PCDH11XQ9BZA7 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.32□□□□□ -1.88
PCDH11XQ9BZA7 AP003117.1-201ENST00000602771 554 ntBASIC3.32□□□□□ -1.88
PCDH11XQ9BZA7 AC007938.3-201ENST00000604965 623 ntBASIC3.32□□□□□ -1.88
PCDH11XQ9BZA7 U6.48-201ENST00000618523 106 ntBASIC3.32□□□□□ -1.88
PCDH11XQ9BZA7 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PCDH11XQ9BZA7 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
PCDH11XQ9BZA7 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PCDH11XQ9BZA7 DCAF13P3-201ENST00000561147 1334 ntBASIC3.31□□□□□ -1.88
PCDH11XQ9BZA7 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PCDH11XQ9BZA7 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PCDH11XQ9BZA7 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
PCDH11XQ9BZA7 MTND5P19-201ENST00000424872 1794 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms