Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 OR7K1P-201ENST00000546439 926 ntBASIC3.51□□□□□ -1.85
SCAPERQ9BY12 OR11H5P-201ENST00000554039 926 ntBASIC3.51□□□□□ -1.85
SCAPERQ9BY12 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.51□□□□□ -1.85
SCAPERQ9BY12 AC067747.1-201ENST00000608026 250 ntBASIC3.51□□□□□ -1.85
SCAPERQ9BY12 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.51□□□□□ -1.85
SCAPERQ9BY12 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
SCAPERQ9BY12 AL162578.1-201ENST00000406202 378 ntBASIC3.5□□□□□ -1.85
SCAPERQ9BY12 MORF4L1P6-201ENST00000418771 268 ntBASIC3.5□□□□□ -1.85
SCAPERQ9BY12 SEC63P1-201ENST00000425785 1258 ntBASIC3.5□□□□□ -1.85
SCAPERQ9BY12 RPL36AP6-201ENST00000435770 321 ntBASIC3.5□□□□□ -1.85
SCAPERQ9BY12 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.5□□□□□ -1.85
SCAPERQ9BY12 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.5□□□□□ -1.85
SCAPERQ9BY12 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.5□□□□□ -1.85
SCAPERQ9BY12 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.5□□□□□ -1.85
SCAPERQ9BY12 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.5□□□□□ -1.85
SCAPERQ9BY12 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.5□□□□□ -1.85
SCAPERQ9BY12 AC009501.3-201ENST00000605001 1352 ntBASIC3.49□□□□□ -1.85
SCAPERQ9BY12 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.49□□□□□ -1.85
SCAPERQ9BY12 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.49□□□□□ -1.85
SCAPERQ9BY12 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SCAPERQ9BY12 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
SCAPERQ9BY12 U8.13-201ENST00000390842 128 ntBASIC3.49□□□□□ -1.85
SCAPERQ9BY12 AL023284.1-201ENST00000403956 276 ntBASIC3.49□□□□□ -1.85
SCAPERQ9BY12 RPL23AP42-201ENST00000471152 471 ntBASIC3.49□□□□□ -1.85
SCAPERQ9BY12 LINC00888-204ENST00000487386 421 ntBASIC3.49□□□□□ -1.85
SCAPERQ9BY12 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.49□□□□□ -1.85
SCAPERQ9BY12 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.49□□□□□ -1.85
SCAPERQ9BY12 AC044913.1-201ENST00000557200 430 ntBASIC3.49□□□□□ -1.85
SCAPERQ9BY12 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.49□□□□□ -1.85
SCAPERQ9BY12 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.49□□□□□ -1.85
SCAPERQ9BY12 BX664608.1-201ENST00000610519 487 ntBASIC3.49□□□□□ -1.85
SCAPERQ9BY12 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.49□□□□□ -1.85
SCAPERQ9BY12 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SCAPERQ9BY12 RNA5SP88-201ENST00000365560 109 ntBASIC3.48□□□□□ -1.85
SCAPERQ9BY12 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.48□□□□□ -1.85
SCAPERQ9BY12 AC009302.1-201ENST00000417147 390 ntBASIC3.48□□□□□ -1.85
SCAPERQ9BY12 AL121882.1-201ENST00000422893 417 ntBASIC3.48□□□□□ -1.85
SCAPERQ9BY12 AC025181.1-201ENST00000477507 416 ntBASIC3.48□□□□□ -1.85
SCAPERQ9BY12 AC106872.3-201ENST00000495104 446 ntBASIC3.48□□□□□ -1.85
SCAPERQ9BY12 SNORA31.26-201ENST00000517250 137 ntBASIC3.48□□□□□ -1.85
SCAPERQ9BY12 MTCYBP20-201ENST00000524239 1129 ntBASIC3.48□□□□□ -1.85
SCAPERQ9BY12 OR5BN1P-201ENST00000532955 829 ntBASIC3.48□□□□□ -1.85
SCAPERQ9BY12 AC025281.1-201ENST00000567026 265 ntBASIC3.48□□□□□ -1.85
SCAPERQ9BY12 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.48□□□□□ -1.85
SCAPERQ9BY12 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.48□□□□□ -1.85
SCAPERQ9BY12 AP000942.3-201ENST00000603702 160 ntBASIC3.48□□□□□ -1.85
SCAPERQ9BY12 AC016877.3-201ENST00000606778 504 ntBASIC3.48□□□□□ -1.85
SCAPERQ9BY12 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SCAPERQ9BY12 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SCAPERQ9BY12 Z99496.1-201ENST00000469424 1477 ntBASIC3.47□□□□□ -1.85
SCAPERQ9BY12 SNORA41-201ENST00000384675 132 ntBASIC3.47□□□□□ -1.85
SCAPERQ9BY12 AL591416.1-201ENST00000404015 867 ntBASIC3.47□□□□□ -1.85
SCAPERQ9BY12 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.47□□□□□ -1.85
SCAPERQ9BY12 PTGES3P5-201ENST00000455109 434 ntBASIC3.47□□□□□ -1.85
SCAPERQ9BY12 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.47□□□□□ -1.85
SCAPERQ9BY12 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.47□□□□□ -1.85
SCAPERQ9BY12 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.47□□□□□ -1.85
SCAPERQ9BY12 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.47□□□□□ -1.85
SCAPERQ9BY12 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.47□□□□□ -1.85
SCAPERQ9BY12 ELOCP31-201ENST00000540463 467 ntBASIC3.47□□□□□ -1.85
SCAPERQ9BY12 AC023813.4-201ENST00000607580 580 ntBASIC3.47□□□□□ -1.85
SCAPERQ9BY12 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.47□□□□□ -1.85
SCAPERQ9BY12 SNORA25.6-201ENST00000364121 118 ntBASIC3.46□□□□□ -1.86
SCAPERQ9BY12 SNORA67.3-201ENST00000384366 140 ntBASIC3.46□□□□□ -1.86
SCAPERQ9BY12 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.46□□□□□ -1.86
SCAPERQ9BY12 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.46□□□□□ -1.86
SCAPERQ9BY12 AF127577.6-201ENST00000623352 2191 ntBASIC3.46□□□□□ -1.86
SCAPERQ9BY12 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SCAPERQ9BY12 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.46□□□□□ -1.86
SCAPERQ9BY12 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SCAPERQ9BY12 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.45□□□□□ -1.86
SCAPERQ9BY12 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.45□□□□□ -1.86
SCAPERQ9BY12 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.45□□□□□ -1.86
SCAPERQ9BY12 Y_RNA.338-201ENST00000365320 114 ntBASIC3.45□□□□□ -1.86
SCAPERQ9BY12 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
SCAPERQ9BY12 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.45□□□□□ -1.86
SCAPERQ9BY12 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC3.45□□□□□ -1.86
SCAPERQ9BY12 IFNWP4-201ENST00000453148 294 ntBASIC3.45□□□□□ -1.86
SCAPERQ9BY12 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.45□□□□□ -1.86
SCAPERQ9BY12 FAM172BP-201ENST00000487497 1089 ntBASIC3.45□□□□□ -1.86
SCAPERQ9BY12 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.45□□□□□ -1.86
SCAPERQ9BY12 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SCAPERQ9BY12 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.45□□□□□ -1.86
SCAPERQ9BY12 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.45□□□□□ -1.86
SCAPERQ9BY12 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.45□□□□□ -1.86
SCAPERQ9BY12 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.45□□□□□ -1.86
SCAPERQ9BY12 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.45□□□□□ -1.86
SCAPERQ9BY12 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.45□□□□□ -1.86
SCAPERQ9BY12 CUL1P1-201ENST00000509510 2425 ntBASIC3.45□□□□□ -1.86
SCAPERQ9BY12 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
SCAPERQ9BY12 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
SCAPERQ9BY12 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.44□□□□□ -1.86
SCAPERQ9BY12 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.44□□□□□ -1.86
SCAPERQ9BY12 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.44□□□□□ -1.86
SCAPERQ9BY12 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SCAPERQ9BY12 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.44□□□□□ -1.86
SCAPERQ9BY12 RNU6-826P-201ENST00000516827 104 ntBASIC3.44□□□□□ -1.86
SCAPERQ9BY12 AC104986.1-201ENST00000517978 436 ntBASIC3.44□□□□□ -1.86
SCAPERQ9BY12 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.44□□□□□ -1.86
SCAPERQ9BY12 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms