Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 AP003497.1-201ENST00000528472 562 ntBASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 SYF2P1-201ENST00000550658 413 ntBASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 AP001429.1-201ENST00000602568 530 ntBASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 AL357094.1-201ENST00000603845 844 ntBASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 AC012531.5-201ENST00000611375 151 ntBASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 AC122133.1-201ENST00000613964 233 ntBASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 AC114781.5-201ENST00000615297 108 ntBASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 MIR7702-201ENST00000621931 59 ntBASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 AP000676.3-201ENST00000623299 569 ntBASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 AC079248.2-201ENST00000623779 326 ntBASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 AL773545.4-201ENST00000637262 310 ntBASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 AL513478.4-201ENST00000641636 310 ntBASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 OR6C71P-202ENST00000641886 1107 ntBASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
HERPUD2Q9BSE4 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
HERPUD2Q9BSE4 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HERPUD2Q9BSE4 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HERPUD2Q9BSE4 RNA5SP366-201ENST00000365454 123 ntBASIC4.28□□□□□ -1.72
HERPUD2Q9BSE4 Y_RNA.548-201ENST00000384656 105 ntBASIC4.28□□□□□ -1.72
HERPUD2Q9BSE4 RNU6-114P-201ENST00000384704 105 ntBASIC4.28□□□□□ -1.72
HERPUD2Q9BSE4 RNU4-65P-201ENST00000410473 140 ntBASIC4.28□□□□□ -1.72
HERPUD2Q9BSE4 RNU4-72P-201ENST00000410754 173 ntBASIC4.28□□□□□ -1.72
HERPUD2Q9BSE4 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.28□□□□□ -1.72
HERPUD2Q9BSE4 AL365203.2-201ENST00000423444 196 ntBASIC4.28□□□□□ -1.72
HERPUD2Q9BSE4 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.28□□□□□ -1.72
HERPUD2Q9BSE4 MTATP6P17-201ENST00000431030 672 ntBASIC4.28□□□□□ -1.72
HERPUD2Q9BSE4 AC024082.2-201ENST00000434771 238 ntBASIC4.28□□□□□ -1.72
HERPUD2Q9BSE4 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.28□□□□□ -1.72
HERPUD2Q9BSE4 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.28□□□□□ -1.72
HERPUD2Q9BSE4 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.28□□□□□ -1.72
HERPUD2Q9BSE4 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
HERPUD2Q9BSE4 UQCRHP4-201ENST00000471686 272 ntBASIC4.28□□□□□ -1.72
HERPUD2Q9BSE4 RPS4XP15-201ENST00000489210 795 ntBASIC4.28□□□□□ -1.72
HERPUD2Q9BSE4 RPF2P2-201ENST00000504693 896 ntBASIC4.28□□□□□ -1.72
HERPUD2Q9BSE4 AC105914.1-201ENST00000511798 226 ntBASIC4.28□□□□□ -1.72
HERPUD2Q9BSE4 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HERPUD2Q9BSE4 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.28□□□□□ -1.72
HERPUD2Q9BSE4 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HERPUD2Q9BSE4 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.28□□□□□ -1.72
HERPUD2Q9BSE4 MRPS36P5-201ENST00000551909 298 ntBASIC4.28□□□□□ -1.72
HERPUD2Q9BSE4 MED28P6-201ENST00000558776 231 ntBASIC4.28□□□□□ -1.72
HERPUD2Q9BSE4 MIR3939-201ENST00000582614 106 ntBASIC4.28□□□□□ -1.72
HERPUD2Q9BSE4 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.28□□□□□ -1.72
HERPUD2Q9BSE4 AC112187.2-201ENST00000604345 283 ntBASIC4.28□□□□□ -1.72
HERPUD2Q9BSE4 AL590392.1-201ENST00000604960 446 ntBASIC4.28□□□□□ -1.72
HERPUD2Q9BSE4 AC092653.1-201ENST00000608509 531 ntBASIC4.28□□□□□ -1.72
HERPUD2Q9BSE4 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.28□□□□□ -1.72
HERPUD2Q9BSE4 AL603755.1-201ENST00000619504 163 ntBASIC4.28□□□□□ -1.72
HERPUD2Q9BSE4 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
HERPUD2Q9BSE4 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
HERPUD2Q9BSE4 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.28□□□□□ -1.72
HERPUD2Q9BSE4 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
HERPUD2Q9BSE4 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.28□□□□□ -1.72
HERPUD2Q9BSE4 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HERPUD2Q9BSE4 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HERPUD2Q9BSE4 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
HERPUD2Q9BSE4 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
HERPUD2Q9BSE4 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HERPUD2Q9BSE4 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
HERPUD2Q9BSE4 AC106871.1-201ENST00000568324 3102 ntBASIC4.28□□□□□ -1.72
HERPUD2Q9BSE4 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
HERPUD2Q9BSE4 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
HERPUD2Q9BSE4 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.27□□□□□ -1.73
HERPUD2Q9BSE4 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.27□□□□□ -1.73
HERPUD2Q9BSE4 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
HERPUD2Q9BSE4 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
HERPUD2Q9BSE4 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
HERPUD2Q9BSE4 Y_RNA.169-201ENST00000363745 96 ntBASIC4.27□□□□□ -1.73
HERPUD2Q9BSE4 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
HERPUD2Q9BSE4 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4.27□□□□□ -1.73
HERPUD2Q9BSE4 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
HERPUD2Q9BSE4 AC025750.1-201ENST00000399891 379 ntBASIC4.27□□□□□ -1.73
HERPUD2Q9BSE4 RPL23AP26-201ENST00000412728 464 ntBASIC4.27□□□□□ -1.73
HERPUD2Q9BSE4 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.27□□□□□ -1.73
HERPUD2Q9BSE4 RSL24D1P6-201ENST00000426934 401 ntBASIC4.27□□□□□ -1.73
HERPUD2Q9BSE4 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC4.27□□□□□ -1.73
HERPUD2Q9BSE4 AL358472.1-201ENST00000431295 329 ntBASIC4.27□□□□□ -1.73
HERPUD2Q9BSE4 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.27□□□□□ -1.73
HERPUD2Q9BSE4 AC069285.2-201ENST00000440210 275 ntBASIC4.27□□□□□ -1.73
HERPUD2Q9BSE4 CDC27P1-201ENST00000445384 715 ntBASIC4.27□□□□□ -1.73
HERPUD2Q9BSE4 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4.27□□□□□ -1.73
HERPUD2Q9BSE4 RPS17P13-201ENST00000448974 407 ntBASIC4.27□□□□□ -1.73
HERPUD2Q9BSE4 CEACAMP4-201ENST00000457676 421 ntBASIC4.27□□□□□ -1.73
HERPUD2Q9BSE4 RPL30P6-201ENST00000475925 342 ntBASIC4.27□□□□□ -1.73
HERPUD2Q9BSE4 AC068587.1-201ENST00000483613 781 ntBASIC4.27□□□□□ -1.73
HERPUD2Q9BSE4 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.27□□□□□ -1.73
HERPUD2Q9BSE4 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.27□□□□□ -1.73
HERPUD2Q9BSE4 RNU7-143P-201ENST00000516781 65 ntBASIC4.27□□□□□ -1.73
HERPUD2Q9BSE4 HMGN1P28-201ENST00000521340 364 ntBASIC4.27□□□□□ -1.73
HERPUD2Q9BSE4 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.27□□□□□ -1.73
HERPUD2Q9BSE4 MIR3138-201ENST00000585238 82 ntBASIC4.27□□□□□ -1.73
HERPUD2Q9BSE4 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.27□□□□□ -1.73
HERPUD2Q9BSE4 MTCYBP22-201ENST00000603788 447 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms