Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 PABPC1P7-201ENST00000413177 1513 ntBASIC4.26□□□□□ -1.73
PAAF1Q9BRP4 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PAAF1Q9BRP4 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 RNU6-744P-201ENST00000365557 107 ntBASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 RNU6-1316P-201ENST00000384242 108 ntBASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 U8.11-201ENST00000384699 133 ntBASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 U8.12-201ENST00000384701 133 ntBASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 PTMAP2-201ENST00000397627 327 ntBASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 AL590704.1-201ENST00000402856 794 ntBASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 RNU6ATAC-201ENST00000408749 126 ntBASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 RAB9AP3-201ENST00000412737 573 ntBASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 CDK8P2-201ENST00000415020 547 ntBASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 AC018644.1-201ENST00000429934 551 ntBASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 MTND1P28-201ENST00000435623 950 ntBASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 RAB9AP1-201ENST00000449393 573 ntBASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 USP9YP12-201ENST00000450481 570 ntBASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 SNRPFP4-201ENST00000456366 242 ntBASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 U8.18-201ENST00000459285 133 ntBASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 AC034236.1-201ENST00000469891 373 ntBASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 HMGB1P36-201ENST00000487709 576 ntBASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 AC023424.2-201ENST00000493479 777 ntBASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 AL139099.1-201ENST00000497398 403 ntBASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 LAMTOR3P2-201ENST00000504479 232 ntBASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 AC079140.3-201ENST00000511111 550 ntBASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 AC021146.3-201ENST00000511911 260 ntBASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 OR8L1P-201ENST00000534005 955 ntBASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 AGGF1P4-201ENST00000568249 801 ntBASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 MIR4307-201ENST00000582802 84 ntBASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 TPMTP1-201ENST00000592307 737 ntBASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 AC079089.3-201ENST00000603094 673 ntBASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 AL355812.1-201ENST00000603215 216 ntBASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 SEPT7P9-203ENST00000604116 343 ntBASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 AC115621.1-201ENST00000604653 858 ntBASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 AL353600.1-201ENST00000608148 251 ntBASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 U73479.1-201ENST00000618062 168 ntBASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.25□□□□□ -1.73
PAAF1Q9BRP4 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 DDX18P3-201ENST00000404856 2007 ntBASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 AC022893.2-201ENST00000564832 3296 ntBASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 SNORA73.2-201ENST00000364946 201 ntBASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 RNU6-730P-201ENST00000383954 104 ntBASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 AL356421.1-201ENST00000403255 413 ntBASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 RN7SKP56-201ENST00000410513 331 ntBASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 AC007899.1-201ENST00000412776 775 ntBASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 Z97055.1-201ENST00000419730 712 ntBASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 RPL21P32-201ENST00000419877 477 ntBASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 OFD1P18Y-201ENST00000420889 959 ntBASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 NOTCH2P1-201ENST00000443481 624 ntBASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 RPL7P36-201ENST00000444633 681 ntBASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 FABP3P2-201ENST00000453169 399 ntBASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 snoU13.8-201ENST00000458890 104 ntBASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 AP001992.1-205ENST00000462248 379 ntBASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 AC006517.1-201ENST00000480485 328 ntBASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 AC034222.1-201ENST00000494052 532 ntBASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 ARL2BPP4-201ENST00000506854 471 ntBASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 FABP5P5-201ENST00000515537 406 ntBASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 SCARNA14-201ENST00000516903 136 ntBASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 TRMT10BP1-201ENST00000519377 943 ntBASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 MTCYBP20-201ENST00000524239 1129 ntBASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 AC022968.1-201ENST00000567372 442 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms