Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
SMOQ99835 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
SMOQ99835 PHKBP1-201ENST00000450951 1951 ntBASIC4.48□□□□□ -1.69
SMOQ99835 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.48□□□□□ -1.69
SMOQ99835 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
SMOQ99835 Y_RNA.88-201ENST00000363029 99 ntBASIC4.48□□□□□ -1.69
SMOQ99835 RNU6-853P-201ENST00000364306 107 ntBASIC4.48□□□□□ -1.69
SMOQ99835 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.48□□□□□ -1.69
SMOQ99835 Y_RNA.390-201ENST00000383932 102 ntBASIC4.48□□□□□ -1.69
SMOQ99835 RPL7P25-201ENST00000404151 721 ntBASIC4.48□□□□□ -1.69
SMOQ99835 GSTA9P-201ENST00000406231 611 ntBASIC4.48□□□□□ -1.69
SMOQ99835 FCF1P10-201ENST00000407590 479 ntBASIC4.48□□□□□ -1.69
SMOQ99835 EIF4A1P3-201ENST00000411521 244 ntBASIC4.48□□□□□ -1.69
SMOQ99835 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.48□□□□□ -1.69
SMOQ99835 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.48□□□□□ -1.69
SMOQ99835 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.48□□□□□ -1.69
SMOQ99835 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.48□□□□□ -1.69
SMOQ99835 RPL23AP38-201ENST00000423801 469 ntBASIC4.48□□□□□ -1.69
SMOQ99835 ISCA1P6-201ENST00000427740 390 ntBASIC4.48□□□□□ -1.69
SMOQ99835 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.48□□□□□ -1.69
SMOQ99835 MTCYBP45-201ENST00000435243 565 ntBASIC4.48□□□□□ -1.69
SMOQ99835 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.48□□□□□ -1.69
SMOQ99835 AC079448.1-201ENST00000449377 373 ntBASIC4.48□□□□□ -1.69
SMOQ99835 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.48□□□□□ -1.69
SMOQ99835 AL672167.3-201ENST00000465951 960 ntBASIC4.48□□□□□ -1.69
SMOQ99835 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.48□□□□□ -1.69
SMOQ99835 AC103987.1-201ENST00000473394 348 ntBASIC4.48□□□□□ -1.69
SMOQ99835 AC010683.1-201ENST00000473673 378 ntBASIC4.48□□□□□ -1.69
SMOQ99835 AC104563.1-201ENST00000476147 376 ntBASIC4.48□□□□□ -1.69
SMOQ99835 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.48□□□□□ -1.69
SMOQ99835 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.48□□□□□ -1.69
SMOQ99835 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.48□□□□□ -1.69
SMOQ99835 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.48□□□□□ -1.69
SMOQ99835 AP005205.1-201ENST00000563503 508 ntBASIC4.48□□□□□ -1.69
SMOQ99835 SNORA59B-202ENST00000578183 701 ntBASIC4.48□□□□□ -1.69
SMOQ99835 RN7SL600P-201ENST00000581811 299 ntBASIC4.48□□□□□ -1.69
SMOQ99835 AL353997.4-201ENST00000586196 166 ntBASIC4.48□□□□□ -1.69
SMOQ99835 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.48□□□□□ -1.69
SMOQ99835 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SMOQ99835 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
SMOQ99835 CKS1BP3-201ENST00000600888 237 ntBASIC4.48□□□□□ -1.69
SMOQ99835 AL359999.1-201ENST00000604513 294 ntBASIC4.48□□□□□ -1.69
SMOQ99835 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SMOQ99835 AP001596.2-201ENST00000608410 312 ntBASIC4.48□□□□□ -1.69
SMOQ99835 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SMOQ99835 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SMOQ99835 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.48□□□□□ -1.69
SMOQ99835 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
SMOQ99835 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.48□□□□□ -1.69
SMOQ99835 MIR8059-201ENST00000620427 81 ntBASIC4.48□□□□□ -1.69
SMOQ99835 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SMOQ99835 AC015908.5-201ENST00000623289 343 ntBASIC4.48□□□□□ -1.69
SMOQ99835 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.48□□□□□ -1.69
SMOQ99835 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
SMOQ99835 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SMOQ99835 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
SMOQ99835 AC090971.4-201ENST00000560291 1800 ntBASIC4.48□□□□□ -1.69
SMOQ99835 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SMOQ99835 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
SMOQ99835 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SMOQ99835 AL122126.1-201ENST00000546905 1318 ntBASIC4.47□□□□□ -1.69
SMOQ99835 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.47□□□□□ -1.69
SMOQ99835 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SMOQ99835 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SMOQ99835 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
SMOQ99835 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
SMOQ99835 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SMOQ99835 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SMOQ99835 GNG5P1-201ENST00000255500 204 ntBASIC4.47□□□□□ -1.69
SMOQ99835 Y_RNA.372-201ENST00000365599 102 ntBASIC4.47□□□□□ -1.69
SMOQ99835 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC4.47□□□□□ -1.69
SMOQ99835 RNU6-146P-201ENST00000384602 108 ntBASIC4.47□□□□□ -1.69
SMOQ99835 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SMOQ99835 CALM2P3-201ENST00000400429 449 ntBASIC4.47□□□□□ -1.69
SMOQ99835 RPL31P45-201ENST00000419532 356 ntBASIC4.47□□□□□ -1.69
SMOQ99835 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.47□□□□□ -1.69
SMOQ99835 AL590233.1-201ENST00000430017 456 ntBASIC4.47□□□□□ -1.69
SMOQ99835 COX6B1P7-201ENST00000430845 235 ntBASIC4.47□□□□□ -1.69
SMOQ99835 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.47□□□□□ -1.69
SMOQ99835 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.47□□□□□ -1.69
SMOQ99835 AL353597.2-202ENST00000434901 373 ntBASIC4.47□□□□□ -1.69
SMOQ99835 MTND4LP10-201ENST00000435146 291 ntBASIC4.47□□□□□ -1.69
SMOQ99835 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.47□□□□□ -1.69
SMOQ99835 FABP3P2-201ENST00000453169 399 ntBASIC4.47□□□□□ -1.69
SMOQ99835 MTCO3P20-201ENST00000454926 688 ntBASIC4.47□□□□□ -1.69
SMOQ99835 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.47□□□□□ -1.69
SMOQ99835 RPL38P1-201ENST00000460914 211 ntBASIC4.47□□□□□ -1.69
SMOQ99835 RPL7P19-201ENST00000469948 618 ntBASIC4.47□□□□□ -1.69
SMOQ99835 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.47□□□□□ -1.69
SMOQ99835 RPS27AP13-201ENST00000498403 237 ntBASIC4.47□□□□□ -1.69
SMOQ99835 KCTD9P5-201ENST00000504141 1170 ntBASIC4.47□□□□□ -1.69
SMOQ99835 PTGES3P3-201ENST00000511479 482 ntBASIC4.47□□□□□ -1.69
SMOQ99835 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.47□□□□□ -1.69
SMOQ99835 AC099522.1-202ENST00000514718 367 ntBASIC4.47□□□□□ -1.69
SMOQ99835 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
SMOQ99835 RNU6-714P-201ENST00000516963 103 ntBASIC4.47□□□□□ -1.69
SMOQ99835 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.47□□□□□ -1.69
SMOQ99835 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.47□□□□□ -1.69
SMOQ99835 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.47□□□□□ -1.69
SMOQ99835 PHBP17-201ENST00000528576 541 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms