Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 AL163153.1-201ENST00000554223 283 ntBASIC3.22□□□□□ -1.89
NPAS2Q99743 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.22□□□□□ -1.89
NPAS2Q99743 ZNF971P-201ENST00000562068 1249 ntBASIC3.22□□□□□ -1.89
NPAS2Q99743 AP001029.3-201ENST00000588063 596 ntBASIC3.22□□□□□ -1.89
NPAS2Q99743 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.22□□□□□ -1.89
NPAS2Q99743 AC006254.3-201ENST00000603353 884 ntBASIC3.22□□□□□ -1.89
NPAS2Q99743 AC124312.4-201ENST00000605533 310 ntBASIC3.22□□□□□ -1.89
NPAS2Q99743 AL158211.2-201ENST00000607282 395 ntBASIC3.22□□□□□ -1.89
NPAS2Q99743 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.22□□□□□ -1.89
NPAS2Q99743 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.22□□□□□ -1.89
NPAS2Q99743 AC008759.3-201ENST00000613300 508 ntBASIC3.22□□□□□ -1.89
NPAS2Q99743 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.22□□□□□ -1.89
NPAS2Q99743 AC073476.4-201ENST00000628409 72 ntBASIC3.22□□□□□ -1.89
NPAS2Q99743 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NPAS2Q99743 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NPAS2Q99743 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.22□□□□□ -1.89
NPAS2Q99743 AC005183.1-201ENST00000603687 1979 ntBASIC3.21□□□□□ -1.89
NPAS2Q99743 GDI2P1-201ENST00000429312 1336 ntBASIC3.21□□□□□ -1.89
NPAS2Q99743 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.21□□□□□ -1.89
NPAS2Q99743 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.21□□□□□ -1.89
NPAS2Q99743 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
NPAS2Q99743 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
NPAS2Q99743 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.21□□□□□ -1.9
NPAS2Q99743 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.21□□□□□ -1.9
NPAS2Q99743 AC021755.1-201ENST00000559747 1447 ntBASIC3.21□□□□□ -1.9
NPAS2Q99743 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.21□□□□□ -1.9
NPAS2Q99743 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
NPAS2Q99743 RNU5B-1-201ENST00000363286 116 ntBASIC3.21□□□□□ -1.9
NPAS2Q99743 U3.11-201ENST00000364476 212 ntBASIC3.21□□□□□ -1.9
NPAS2Q99743 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
NPAS2Q99743 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
NPAS2Q99743 MIR217-201ENST00000384817 110 ntBASIC3.21□□□□□ -1.9
NPAS2Q99743 AL591034.1-201ENST00000407447 340 ntBASIC3.21□□□□□ -1.9
NPAS2Q99743 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.21□□□□□ -1.9
NPAS2Q99743 BX323014.1-201ENST00000412876 237 ntBASIC3.21□□□□□ -1.9
NPAS2Q99743 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
NPAS2Q99743 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.21□□□□□ -1.9
NPAS2Q99743 YPEL5P1-201ENST00000419731 367 ntBASIC3.21□□□□□ -1.9
NPAS2Q99743 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.21□□□□□ -1.9
NPAS2Q99743 AL158156.1-201ENST00000422509 473 ntBASIC3.21□□□□□ -1.9
NPAS2Q99743 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.21□□□□□ -1.9
NPAS2Q99743 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.21□□□□□ -1.9
NPAS2Q99743 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC3.21□□□□□ -1.9
NPAS2Q99743 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.21□□□□□ -1.9
NPAS2Q99743 NEK4P1-201ENST00000433383 879 ntBASIC3.21□□□□□ -1.9
NPAS2Q99743 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.21□□□□□ -1.9
NPAS2Q99743 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
NPAS2Q99743 MTCO1P48-201ENST00000448024 1096 ntBASIC3.21□□□□□ -1.9
NPAS2Q99743 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.21□□□□□ -1.9
NPAS2Q99743 HMGB1P25-201ENST00000468402 607 ntBASIC3.21□□□□□ -1.9
NPAS2Q99743 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.21□□□□□ -1.9
NPAS2Q99743 AC093663.1-201ENST00000497190 394 ntBASIC3.21□□□□□ -1.9
NPAS2Q99743 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.21□□□□□ -1.9
NPAS2Q99743 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.21□□□□□ -1.9
NPAS2Q99743 AC019227.1-201ENST00000526902 510 ntBASIC3.21□□□□□ -1.9
NPAS2Q99743 AP001317.1-201ENST00000531194 960 ntBASIC3.21□□□□□ -1.9
NPAS2Q99743 AC126177.3-201ENST00000551839 688 ntBASIC3.21□□□□□ -1.9
NPAS2Q99743 MTCYBP27-201ENST00000555160 670 ntBASIC3.21□□□□□ -1.9
NPAS2Q99743 NCAPGP2-201ENST00000557911 754 ntBASIC3.21□□□□□ -1.9
NPAS2Q99743 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.21□□□□□ -1.9
NPAS2Q99743 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.21□□□□□ -1.9
NPAS2Q99743 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.21□□□□□ -1.9
NPAS2Q99743 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.21□□□□□ -1.9
NPAS2Q99743 AP003973.1-201ENST00000604639 691 ntBASIC3.21□□□□□ -1.9
NPAS2Q99743 AC055876.5-201ENST00000605667 259 ntBASIC3.21□□□□□ -1.9
NPAS2Q99743 AL442067.2-201ENST00000614033 363 ntBASIC3.21□□□□□ -1.9
NPAS2Q99743 AL355810.1-201ENST00000614629 552 ntBASIC3.21□□□□□ -1.9
NPAS2Q99743 AC008083.4-201ENST00000615076 444 ntBASIC3.21□□□□□ -1.9
NPAS2Q99743 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.21□□□□□ -1.9
NPAS2Q99743 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.21□□□□□ -1.9
NPAS2Q99743 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.21□□□□□ -1.9
NPAS2Q99743 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
NPAS2Q99743 AL356274.2-201ENST00000624379 3752 ntBASIC3.21□□□□□ -1.9
NPAS2Q99743 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
NPAS2Q99743 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
NPAS2Q99743 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
NPAS2Q99743 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
NPAS2Q99743 EI24P2-201ENST00000397776 1076 ntBASIC3.2□□□□□ -1.9
NPAS2Q99743 CYCSP45-201ENST00000402289 315 ntBASIC3.2□□□□□ -1.9
NPAS2Q99743 AL355615.1-201ENST00000406187 641 ntBASIC3.2□□□□□ -1.9
NPAS2Q99743 AL133264.1-201ENST00000407157 562 ntBASIC3.2□□□□□ -1.9
NPAS2Q99743 AC092638.1-201ENST00000411966 1275 ntBASIC3.2□□□□□ -1.9
NPAS2Q99743 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NPAS2Q99743 RPL21P32-201ENST00000419877 477 ntBASIC3.2□□□□□ -1.9
NPAS2Q99743 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.2□□□□□ -1.9
NPAS2Q99743 MTCYBP32-201ENST00000427945 1084 ntBASIC3.2□□□□□ -1.9
NPAS2Q99743 AC005326.1-201ENST00000429197 123 ntBASIC3.2□□□□□ -1.9
NPAS2Q99743 RPS3AP12-201ENST00000443616 753 ntBASIC3.2□□□□□ -1.9
NPAS2Q99743 AC104978.1-201ENST00000449387 391 ntBASIC3.2□□□□□ -1.9
NPAS2Q99743 AC115115.1-201ENST00000449927 248 ntBASIC3.2□□□□□ -1.9
NPAS2Q99743 BX510359.1-201ENST00000456973 237 ntBASIC3.2□□□□□ -1.9
NPAS2Q99743 RPL21P10-201ENST00000463521 490 ntBASIC3.2□□□□□ -1.9
NPAS2Q99743 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.2□□□□□ -1.9
NPAS2Q99743 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.2□□□□□ -1.9
NPAS2Q99743 AP001207.2-201ENST00000519490 539 ntBASIC3.2□□□□□ -1.9
NPAS2Q99743 AC245166.1-201ENST00000521012 253 ntBASIC3.2□□□□□ -1.9
NPAS2Q99743 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.2□□□□□ -1.9
NPAS2Q99743 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.2□□□□□ -1.9
NPAS2Q99743 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.2□□□□□ -1.9
NPAS2Q99743 MTND4LP25-201ENST00000570218 163 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms