Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.01□□□□□ -1.93
CDX2Q99626 AC078918.1-201ENST00000498515 228 ntBASIC3.01□□□□□ -1.93
CDX2Q99626 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.01□□□□□ -1.93
CDX2Q99626 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.01□□□□□ -1.93
CDX2Q99626 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.01□□□□□ -1.93
CDX2Q99626 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.01□□□□□ -1.93
CDX2Q99626 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.01□□□□□ -1.93
CDX2Q99626 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.01□□□□□ -1.93
CDX2Q99626 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.01□□□□□ -1.93
CDX2Q99626 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.01□□□□□ -1.93
CDX2Q99626 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.01□□□□□ -1.93
CDX2Q99626 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.01□□□□□ -1.93
CDX2Q99626 KATNBL1P5-201ENST00000605015 517 ntBASIC3.01□□□□□ -1.93
CDX2Q99626 AL450270.1-201ENST00000606160 391 ntBASIC3.01□□□□□ -1.93
CDX2Q99626 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.01□□□□□ -1.93
CDX2Q99626 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
CDX2Q99626 AC092628.2-201ENST00000622492 339 ntBASIC3.01□□□□□ -1.93
CDX2Q99626 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
CDX2Q99626 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
CDX2Q99626 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3□□□□□ -1.93
CDX2Q99626 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3□□□□□ -1.93
CDX2Q99626 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CDX2Q99626 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3□□□□□ -1.93
CDX2Q99626 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CDX2Q99626 RNA5SP289-201ENST00000362332 137 ntBASIC3□□□□□ -1.93
CDX2Q99626 RNA5SP189-201ENST00000364920 115 ntBASIC3□□□□□ -1.93
CDX2Q99626 SNORA36C-201ENST00000384289 132 ntBASIC3□□□□□ -1.93
CDX2Q99626 RPL7P8-201ENST00000411964 730 ntBASIC3□□□□□ -1.93
CDX2Q99626 HMGB3P31-201ENST00000413333 595 ntBASIC3□□□□□ -1.93
CDX2Q99626 MTCO1P39-201ENST00000426148 480 ntBASIC3□□□□□ -1.93
CDX2Q99626 AL139415.2-201ENST00000431968 163 ntBASIC3□□□□□ -1.93
CDX2Q99626 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
CDX2Q99626 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3□□□□□ -1.93
CDX2Q99626 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3□□□□□ -1.93
CDX2Q99626 AP000893.1-201ENST00000474462 794 ntBASIC3□□□□□ -1.93
CDX2Q99626 AC108729.2-201ENST00000476543 840 ntBASIC3□□□□□ -1.93
CDX2Q99626 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
CDX2Q99626 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3□□□□□ -1.93
CDX2Q99626 RNU6-1231P-201ENST00000517185 103 ntBASIC3□□□□□ -1.93
CDX2Q99626 AC109329.2-201ENST00000519658 482 ntBASIC3□□□□□ -1.93
CDX2Q99626 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC3□□□□□ -1.93
CDX2Q99626 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3□□□□□ -1.93
CDX2Q99626 UBTFL10-201ENST00000528532 562 ntBASIC3□□□□□ -1.93
CDX2Q99626 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC3□□□□□ -1.93
CDX2Q99626 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3□□□□□ -1.93
CDX2Q99626 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3□□□□□ -1.93
CDX2Q99626 AC025918.2-201ENST00000558683 763 ntBASIC3□□□□□ -1.93
CDX2Q99626 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC3□□□□□ -1.93
CDX2Q99626 CYP2C60P-201ENST00000566088 139 ntBASIC3□□□□□ -1.93
CDX2Q99626 NTAN1P1-201ENST00000603150 646 ntBASIC3□□□□□ -1.93
CDX2Q99626 AC011468.4-201ENST00000603942 409 ntBASIC3□□□□□ -1.93
CDX2Q99626 AC113194.1-201ENST00000606037 500 ntBASIC3□□□□□ -1.93
CDX2Q99626 MIR1264-201ENST00000616374 69 ntBASIC3□□□□□ -1.93
CDX2Q99626 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3□□□□□ -1.93
CDX2Q99626 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CDX2Q99626 PISRT1-201ENST00000626175 531 ntBASIC3□□□□□ -1.93
CDX2Q99626 CTSLP2-204ENST00000629029 392 ntBASIC3□□□□□ -1.93
CDX2Q99626 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3□□□□□ -1.93
CDX2Q99626 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3□□□□□ -1.93
CDX2Q99626 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
CDX2Q99626 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CDX2Q99626 PWAR6-201ENST00000552334 4618 ntBASIC2.99□□□□□ -1.93
CDX2Q99626 MTND5P11-201ENST00000511037 1812 ntBASIC2.99□□□□□ -1.93
CDX2Q99626 RNVU1-3-201ENST00000364313 161 ntBASIC2.99□□□□□ -1.93
CDX2Q99626 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CDX2Q99626 MIR1287-201ENST00000408492 90 ntBASIC2.99□□□□□ -1.93
CDX2Q99626 RNU4-53P-201ENST00000410828 140 ntBASIC2.99□□□□□ -1.93
CDX2Q99626 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.99□□□□□ -1.93
CDX2Q99626 AC004987.3-201ENST00000413879 771 ntBASIC2.99□□□□□ -1.93
CDX2Q99626 AC234782.4-201ENST00000417646 1048 ntBASIC2.99□□□□□ -1.93
CDX2Q99626 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.99□□□□□ -1.93
CDX2Q99626 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC2.99□□□□□ -1.93
CDX2Q99626 FAM103A2P-201ENST00000444122 354 ntBASIC2.99□□□□□ -1.93
CDX2Q99626 RPS27P5-201ENST00000444247 244 ntBASIC2.99□□□□□ -1.93
CDX2Q99626 RPL29P29-201ENST00000448725 423 ntBASIC2.99□□□□□ -1.93
CDX2Q99626 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.99□□□□□ -1.93
CDX2Q99626 RPL37P6-202ENST00000464216 403 ntBASIC2.99□□□□□ -1.93
CDX2Q99626 ACTG1P13-201ENST00000486987 1043 ntBASIC2.99□□□□□ -1.93
CDX2Q99626 AC111193.1-201ENST00000504097 155 ntBASIC2.99□□□□□ -1.93
CDX2Q99626 AC096725.1-201ENST00000514266 313 ntBASIC2.99□□□□□ -1.93
CDX2Q99626 SNORA31.21-201ENST00000517180 77 ntBASIC2.99□□□□□ -1.93
CDX2Q99626 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC2.99□□□□□ -1.93
CDX2Q99626 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC2.99□□□□□ -1.93
CDX2Q99626 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC2.99□□□□□ -1.93
CDX2Q99626 MIR4738-201ENST00000579134 87 ntBASIC2.99□□□□□ -1.93
CDX2Q99626 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.99□□□□□ -1.93
CDX2Q99626 AP000919.1-202ENST00000581139 1264 ntBASIC2.99□□□□□ -1.93
CDX2Q99626 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.99□□□□□ -1.93
CDX2Q99626 OR4H6P-202ENST00000603819 340 ntBASIC2.99□□□□□ -1.93
CDX2Q99626 AL392112.1-201ENST00000605115 829 ntBASIC2.99□□□□□ -1.93
CDX2Q99626 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CDX2Q99626 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.99□□□□□ -1.93
CDX2Q99626 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CDX2Q99626 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.99□□□□□ -1.93
CDX2Q99626 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.99□□□□□ -1.93
CDX2Q99626 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CDX2Q99626 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CDX2Q99626 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.98□□□□□ -1.93
CDX2Q99626 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CDX2Q99626 RNU6-1293P-201ENST00000384077 107 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms