Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 HSPE1P14-201ENST00000605812 302 ntBASIC3.91□□□□□ -1.78
PKP4Q99569 RNU4-89P-201ENST00000607443 133 ntBASIC3.91□□□□□ -1.78
PKP4Q99569 AL513477.2-201ENST00000607858 568 ntBASIC3.91□□□□□ -1.78
PKP4Q99569 AL391497.1-201ENST00000608671 547 ntBASIC3.91□□□□□ -1.78
PKP4Q99569 AC100793.4-201ENST00000613683 429 ntBASIC3.91□□□□□ -1.78
PKP4Q99569 MIR7844-201ENST00000616161 122 ntBASIC3.91□□□□□ -1.78
PKP4Q99569 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.91□□□□□ -1.78
PKP4Q99569 AC009509.4-201ENST00000619202 509 ntBASIC3.91□□□□□ -1.78
PKP4Q99569 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
PKP4Q99569 AC099063.3-201ENST00000642066 185 ntBASIC3.91□□□□□ -1.78
PKP4Q99569 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PKP4Q99569 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.91□□□□□ -1.78
PKP4Q99569 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PKP4Q99569 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PKP4Q99569 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
PKP4Q99569 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
PKP4Q99569 RLIMP1-201ENST00000339626 1680 ntBASIC3.9□□□□□ -1.78
PKP4Q99569 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
PKP4Q99569 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
PKP4Q99569 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
PKP4Q99569 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
PKP4Q99569 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
PKP4Q99569 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
PKP4Q99569 RNU6-1066P-201ENST00000363573 105 ntBASIC3.9□□□□□ -1.79
PKP4Q99569 RNU1-85P-201ENST00000364127 164 ntBASIC3.9□□□□□ -1.79
PKP4Q99569 RNU6-1215P-201ENST00000384441 102 ntBASIC3.9□□□□□ -1.79
PKP4Q99569 Y_RNA.517-201ENST00000384551 106 ntBASIC3.9□□□□□ -1.79
PKP4Q99569 RNU6-837P-201ENST00000391056 108 ntBASIC3.9□□□□□ -1.79
PKP4Q99569 RNU4-6P-201ENST00000410804 122 ntBASIC3.9□□□□□ -1.79
PKP4Q99569 RNA5SP306-201ENST00000411087 107 ntBASIC3.9□□□□□ -1.79
PKP4Q99569 PIGPP2-201ENST00000411569 458 ntBASIC3.9□□□□□ -1.79
PKP4Q99569 RPL23AP39-201ENST00000415533 405 ntBASIC3.9□□□□□ -1.79
PKP4Q99569 RAD23BP2-201ENST00000416003 1207 ntBASIC3.9□□□□□ -1.79
PKP4Q99569 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.9□□□□□ -1.79
PKP4Q99569 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
PKP4Q99569 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.9□□□□□ -1.79
PKP4Q99569 TBCAP1-201ENST00000436520 327 ntBASIC3.9□□□□□ -1.79
PKP4Q99569 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.9□□□□□ -1.79
PKP4Q99569 CDC27P1-201ENST00000445384 715 ntBASIC3.9□□□□□ -1.79
PKP4Q99569 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PKP4Q99569 AC114755.5-201ENST00000447760 831 ntBASIC3.9□□□□□ -1.79
PKP4Q99569 RPL36AP33-201ENST00000450395 310 ntBASIC3.9□□□□□ -1.79
PKP4Q99569 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.9□□□□□ -1.79
PKP4Q99569 RPL23AP35-201ENST00000451906 501 ntBASIC3.9□□□□□ -1.79
PKP4Q99569 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PKP4Q99569 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.9□□□□□ -1.79
PKP4Q99569 MTCYBP1-201ENST00000454315 1119 ntBASIC3.9□□□□□ -1.79
PKP4Q99569 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.9□□□□□ -1.79
PKP4Q99569 SUMO2P2-201ENST00000456482 255 ntBASIC3.9□□□□□ -1.79
PKP4Q99569 CFTRP1-201ENST00000456646 183 ntBASIC3.9□□□□□ -1.79
PKP4Q99569 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.9□□□□□ -1.79
PKP4Q99569 AC092451.1-201ENST00000480211 153 ntBASIC3.9□□□□□ -1.79
PKP4Q99569 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.9□□□□□ -1.79
PKP4Q99569 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.9□□□□□ -1.79
PKP4Q99569 AC093281.2-201ENST00000510153 597 ntBASIC3.9□□□□□ -1.79
PKP4Q99569 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.9□□□□□ -1.79
PKP4Q99569 OR5AK1P-201ENST00000524837 922 ntBASIC3.9□□□□□ -1.79
PKP4Q99569 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.9□□□□□ -1.79
PKP4Q99569 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PKP4Q99569 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.9□□□□□ -1.79
PKP4Q99569 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.9□□□□□ -1.79
PKP4Q99569 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.9□□□□□ -1.79
PKP4Q99569 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.9□□□□□ -1.79
PKP4Q99569 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.9□□□□□ -1.79
PKP4Q99569 MTCYBP22-201ENST00000603788 447 ntBASIC3.9□□□□□ -1.79
PKP4Q99569 AC087752.4-201ENST00000605911 462 ntBASIC3.9□□□□□ -1.79
PKP4Q99569 AC091946.2-201ENST00000606105 291 ntBASIC3.9□□□□□ -1.79
PKP4Q99569 AC005332.6-201ENST00000613178 446 ntBASIC3.9□□□□□ -1.79
PKP4Q99569 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.9□□□□□ -1.79
PKP4Q99569 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PKP4Q99569 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.9□□□□□ -1.79
PKP4Q99569 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PKP4Q99569 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PKP4Q99569 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
PKP4Q99569 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.9□□□□□ -1.79
PKP4Q99569 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
PKP4Q99569 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PKP4Q99569 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PKP4Q99569 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.89□□□□□ -1.79
PKP4Q99569 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
PKP4Q99569 Y_RNA.3-201ENST00000362331 103 ntBASIC3.89□□□□□ -1.79
PKP4Q99569 RNU6-115P-201ENST00000364310 107 ntBASIC3.89□□□□□ -1.79
PKP4Q99569 RNU6-1119P-201ENST00000384349 108 ntBASIC3.89□□□□□ -1.79
PKP4Q99569 RNU6-517P-201ENST00000384362 110 ntBASIC3.89□□□□□ -1.79
PKP4Q99569 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
PKP4Q99569 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PKP4Q99569 DEFB108C-201ENST00000400154 252 ntBASIC3.89□□□□□ -1.79
PKP4Q99569 AL139098.1-201ENST00000407291 389 ntBASIC3.89□□□□□ -1.79
PKP4Q99569 MIR1251-201ENST00000408552 70 ntBASIC3.89□□□□□ -1.79
PKP4Q99569 JKAMPP1-201ENST00000413804 919 ntBASIC3.89□□□□□ -1.79
PKP4Q99569 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.89□□□□□ -1.79
PKP4Q99569 CDK8P2-201ENST00000415020 547 ntBASIC3.89□□□□□ -1.79
PKP4Q99569 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.89□□□□□ -1.79
PKP4Q99569 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.89□□□□□ -1.79
PKP4Q99569 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.89□□□□□ -1.79
PKP4Q99569 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.89□□□□□ -1.79
PKP4Q99569 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.89□□□□□ -1.79
PKP4Q99569 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.89□□□□□ -1.79
PKP4Q99569 ZNF114P1-201ENST00000453500 292 ntBASIC3.89□□□□□ -1.79
PKP4Q99569 RPL31P61-201ENST00000496160 376 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms