Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.3□□□□□ -1.88
RPRD1AQ96P16 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.3□□□□□ -1.88
RPRD1AQ96P16 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RPRD1AQ96P16 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
RPRD1AQ96P16 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
RPRD1AQ96P16 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.3□□□□□ -1.88
RPRD1AQ96P16 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RPRD1AQ96P16 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RPRD1AQ96P16 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.29□□□□□ -1.88
RPRD1AQ96P16 RNU6-50P-201ENST00000362356 103 ntBASIC3.29□□□□□ -1.88
RPRD1AQ96P16 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.29□□□□□ -1.88
RPRD1AQ96P16 SAR1AP2-201ENST00000392696 594 ntBASIC3.29□□□□□ -1.88
RPRD1AQ96P16 RPL31P1-201ENST00000398116 372 ntBASIC3.29□□□□□ -1.88
RPRD1AQ96P16 MTND4LP20-201ENST00000402379 270 ntBASIC3.29□□□□□ -1.88
RPRD1AQ96P16 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.29□□□□□ -1.88
RPRD1AQ96P16 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.29□□□□□ -1.88
RPRD1AQ96P16 SFR1P2-201ENST00000421841 730 ntBASIC3.29□□□□□ -1.88
RPRD1AQ96P16 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.29□□□□□ -1.88
RPRD1AQ96P16 GLRXP1-201ENST00000423261 334 ntBASIC3.29□□□□□ -1.88
RPRD1AQ96P16 HSFY1P1-201ENST00000423928 1178 ntBASIC3.29□□□□□ -1.88
RPRD1AQ96P16 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.29□□□□□ -1.88
RPRD1AQ96P16 BX679664.1-201ENST00000434429 253 ntBASIC3.29□□□□□ -1.88
RPRD1AQ96P16 AC000041.1-201ENST00000439655 175 ntBASIC3.29□□□□□ -1.88
RPRD1AQ96P16 AC004022.1-201ENST00000447766 1066 ntBASIC3.29□□□□□ -1.88
RPRD1AQ96P16 AC115115.1-201ENST00000449927 248 ntBASIC3.29□□□□□ -1.88
RPRD1AQ96P16 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC3.29□□□□□ -1.88
RPRD1AQ96P16 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.29□□□□□ -1.88
RPRD1AQ96P16 AC026427.2-201ENST00000506228 536 ntBASIC3.29□□□□□ -1.88
RPRD1AQ96P16 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.29□□□□□ -1.88
RPRD1AQ96P16 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.29□□□□□ -1.88
RPRD1AQ96P16 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.29□□□□□ -1.88
RPRD1AQ96P16 AP001636.2-201ENST00000525517 696 ntBASIC3.29□□□□□ -1.88
RPRD1AQ96P16 AC113192.3-201ENST00000529152 742 ntBASIC3.29□□□□□ -1.88
RPRD1AQ96P16 AC006518.2-201ENST00000542513 940 ntBASIC3.29□□□□□ -1.88
RPRD1AQ96P16 AC004024.1-201ENST00000549244 247 ntBASIC3.29□□□□□ -1.88
RPRD1AQ96P16 AL161756.2-201ENST00000604597 246 ntBASIC3.29□□□□□ -1.88
RPRD1AQ96P16 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
RPRD1AQ96P16 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.29□□□□□ -1.88
RPRD1AQ96P16 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.29□□□□□ -1.88
RPRD1AQ96P16 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RPRD1AQ96P16 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.29□□□□□ -1.88
RPRD1AQ96P16 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RPRD1AQ96P16 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RPRD1AQ96P16 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.29□□□□□ -1.88
RPRD1AQ96P16 FAM35CP-201ENST00000554755 2470 ntBASIC3.28□□□□□ -1.88
RPRD1AQ96P16 OR1S2-201ENST00000302592 978 ntBASIC3.28□□□□□ -1.88
RPRD1AQ96P16 Y_RNA.110-201ENST00000363220 99 ntBASIC3.28□□□□□ -1.88
RPRD1AQ96P16 RNU6-115P-201ENST00000364310 107 ntBASIC3.28□□□□□ -1.88
RPRD1AQ96P16 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.28□□□□□ -1.88
RPRD1AQ96P16 SNORD116-23-201ENST00000384645 92 ntBASIC3.28□□□□□ -1.88
RPRD1AQ96P16 MIR491-201ENST00000384877 84 ntBASIC3.28□□□□□ -1.88
RPRD1AQ96P16 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
RPRD1AQ96P16 RNU6-575P-201ENST00000411326 105 ntBASIC3.28□□□□□ -1.88
RPRD1AQ96P16 RPS7P13-201ENST00000413955 498 ntBASIC3.28□□□□□ -1.88
RPRD1AQ96P16 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.28□□□□□ -1.88
RPRD1AQ96P16 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.28□□□□□ -1.88
RPRD1AQ96P16 RAD23BP2-201ENST00000416003 1207 ntBASIC3.28□□□□□ -1.88
RPRD1AQ96P16 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.28□□□□□ -1.88
RPRD1AQ96P16 AL512649.1-201ENST00000428997 581 ntBASIC3.28□□□□□ -1.88
RPRD1AQ96P16 AL512637.2-201ENST00000431287 1256 ntBASIC3.28□□□□□ -1.88
RPRD1AQ96P16 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.28□□□□□ -1.88
RPRD1AQ96P16 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.28□□□□□ -1.88
RPRD1AQ96P16 AC127537.2-201ENST00000439258 465 ntBASIC3.28□□□□□ -1.88
RPRD1AQ96P16 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.28□□□□□ -1.88
RPRD1AQ96P16 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.28□□□□□ -1.88
RPRD1AQ96P16 NDUFA5P7-201ENST00000452914 242 ntBASIC3.28□□□□□ -1.88
RPRD1AQ96P16 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.28□□□□□ -1.88
RPRD1AQ96P16 PABPC1P3-201ENST00000469174 459 ntBASIC3.28□□□□□ -1.88
RPRD1AQ96P16 HMGN2P13-201ENST00000476476 274 ntBASIC3.28□□□□□ -1.88
RPRD1AQ96P16 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.28□□□□□ -1.88
RPRD1AQ96P16 AC108860.1-201ENST00000484521 383 ntBASIC3.28□□□□□ -1.88
RPRD1AQ96P16 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.28□□□□□ -1.88
RPRD1AQ96P16 RNU6-885P-201ENST00000516607 104 ntBASIC3.28□□□□□ -1.88
RPRD1AQ96P16 RN7SKP57-201ENST00000517248 293 ntBASIC3.28□□□□□ -1.88
RPRD1AQ96P16 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.28□□□□□ -1.88
RPRD1AQ96P16 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
RPRD1AQ96P16 LSM6P2-201ENST00000552208 177 ntBASIC3.28□□□□□ -1.88
RPRD1AQ96P16 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.28□□□□□ -1.88
RPRD1AQ96P16 AC087481.2-201ENST00000565492 330 ntBASIC3.28□□□□□ -1.88
RPRD1AQ96P16 MIR5004-201ENST00000579078 107 ntBASIC3.28□□□□□ -1.88
RPRD1AQ96P16 AL133393.1-201ENST00000603277 287 ntBASIC3.28□□□□□ -1.88
RPRD1AQ96P16 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.28□□□□□ -1.88
RPRD1AQ96P16 AC138932.5-201ENST00000617759 563 ntBASIC3.28□□□□□ -1.88
RPRD1AQ96P16 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.28□□□□□ -1.88
RPRD1AQ96P16 AC026422.1-201ENST00000623961 452 ntBASIC3.28□□□□□ -1.88
RPRD1AQ96P16 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
RPRD1AQ96P16 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RPRD1AQ96P16 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.28□□□□□ -1.88
RPRD1AQ96P16 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.28□□□□□ -1.88
RPRD1AQ96P16 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.27□□□□□ -1.89
RPRD1AQ96P16 AC111188.2-201ENST00000529697 1387 ntBASIC3.27□□□□□ -1.89
RPRD1AQ96P16 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RPRD1AQ96P16 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.27□□□□□ -1.89
RPRD1AQ96P16 RNU1-75P-201ENST00000347264 129 ntBASIC3.27□□□□□ -1.89
RPRD1AQ96P16 RNU6-582P-201ENST00000362989 107 ntBASIC3.27□□□□□ -1.89
RPRD1AQ96P16 RNU6-1249P-201ENST00000363237 111 ntBASIC3.27□□□□□ -1.89
RPRD1AQ96P16 RNU6-468P-201ENST00000384003 109 ntBASIC3.27□□□□□ -1.89
RPRD1AQ96P16 RNU6-207P-201ENST00000384137 107 ntBASIC3.27□□□□□ -1.89
RPRD1AQ96P16 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
RPRD1AQ96P16 AL023807.1-201ENST00000407932 359 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms