Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC1.99□□□□□ -2.09
SPG11Q96JI7 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC1.99□□□□□ -2.09
SPG11Q96JI7 RPS27P29-201ENST00000463110 252 ntBASIC1.99□□□□□ -2.09
SPG11Q96JI7 AC011037.1-201ENST00000483964 558 ntBASIC1.99□□□□□ -2.09
SPG11Q96JI7 RPL36AP51-201ENST00000487216 318 ntBASIC1.99□□□□□ -2.09
SPG11Q96JI7 ENSA-210ENST00000503241 574 ntTSL 3 BASIC1.99□□□□□ -2.09
SPG11Q96JI7 FAM92A1P2-202ENST00000504766 877 ntBASIC1.99□□□□□ -2.09
SPG11Q96JI7 RNA5SP337-201ENST00000517007 109 ntBASIC1.99□□□□□ -2.09
SPG11Q96JI7 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC1.99□□□□□ -2.09
SPG11Q96JI7 SNRPGP18-201ENST00000553000 214 ntBASIC1.99□□□□□ -2.09
SPG11Q96JI7 AC005730.3-201ENST00000583067 366 ntBASIC1.99□□□□□ -2.09
SPG11Q96JI7 AP001542.2-201ENST00000593141 364 ntBASIC1.99□□□□□ -2.09
SPG11Q96JI7 AC010378.1-201ENST00000619270 362 ntBASIC1.99□□□□□ -2.09
SPG11Q96JI7 AC107021.2-201ENST00000567714 2095 ntBASIC1.99□□□□□ -2.09
SPG11Q96JI7 OR11H5P-202ENST00000641612 1325 ntBASIC1.98□□□□□ -2.09
SPG11Q96JI7 CUBN-201ENST00000377823 705 ntTSL 3 BASIC1.98□□□□□ -2.09
SPG11Q96JI7 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
SPG11Q96JI7 MRPL50P4-201ENST00000446432 475 ntBASIC1.98□□□□□ -2.09
SPG11Q96JI7 AC104090.1-201ENST00000506341 1171 ntBASIC1.98□□□□□ -2.09
SPG11Q96JI7 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC1.98□□□□□ -2.09
SPG11Q96JI7 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.98□□□□□ -2.09
SPG11Q96JI7 AL020991.1-201ENST00000612314 373 ntBASIC1.98□□□□□ -2.09
SPG11Q96JI7 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC1.98□□□□□ -2.09
SPG11Q96JI7 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SPG11Q96JI7 AC025125.1-201ENST00000624743 1922 ntBASIC1.98□□□□□ -2.09
SPG11Q96JI7 Z82209.1-201ENST00000422141 2135 ntBASIC1.98□□□□□ -2.09
SPG11Q96JI7 MTND5P3-201ENST00000438536 1800 ntBASIC1.98□□□□□ -2.09
SPG11Q96JI7 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SPG11Q96JI7 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
SPG11Q96JI7 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
SPG11Q96JI7 RNU4-62P-201ENST00000410125 130 ntBASIC1.98□□□□□ -2.09
SPG11Q96JI7 AP000275.1-201ENST00000411943 390 ntBASIC1.98□□□□□ -2.09
SPG11Q96JI7 PPIAP17-201ENST00000438507 471 ntBASIC1.98□□□□□ -2.09
SPG11Q96JI7 NFU1-207ENST00000462320 558 ntTSL 4 BASIC1.98□□□□□ -2.09
SPG11Q96JI7 NIPA2P2-201ENST00000496376 1083 ntBASIC1.98□□□□□ -2.09
SPG11Q96JI7 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC1.98□□□□□ -2.09
SPG11Q96JI7 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SPG11Q96JI7 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SPG11Q96JI7 AC090229.1-201ENST00000590983 1609 ntBASIC1.97□□□□□ -2.09
SPG11Q96JI7 RFX3-203ENST00000381984 364 ntTSL 3 BASIC1.97□□□□□ -2.09
SPG11Q96JI7 RNA5SP210-201ENST00000391034 120 ntBASIC1.97□□□□□ -2.09
SPG11Q96JI7 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.97□□□□□ -2.09
SPG11Q96JI7 RNU2-68P-201ENST00000410878 191 ntBASIC1.97□□□□□ -2.09
SPG11Q96JI7 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC1.97□□□□□ -2.09
SPG11Q96JI7 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
SPG11Q96JI7 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC1.97□□□□□ -2.09
SPG11Q96JI7 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC1.97□□□□□ -2.09
SPG11Q96JI7 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC1.97□□□□□ -2.09
SPG11Q96JI7 AC103968.1-201ENST00000557841 573 ntBASIC1.97□□□□□ -2.09
SPG11Q96JI7 Z99129.2-201ENST00000619967 314 ntBASIC1.97□□□□□ -2.09
SPG11Q96JI7 AL512646.1-201ENST00000269395 1077 ntBASIC1.97□□□□□ -2.09
SPG11Q96JI7 RNU6-457P-201ENST00000363999 107 ntBASIC1.97□□□□□ -2.09
SPG11Q96JI7 RNU6-1032P-201ENST00000384100 107 ntBASIC1.97□□□□□ -2.09
SPG11Q96JI7 Y_RNA.458-201ENST00000384240 102 ntBASIC1.97□□□□□ -2.09
SPG11Q96JI7 RNA5SP296-201ENST00000410523 111 ntBASIC1.97□□□□□ -2.09
SPG11Q96JI7 AL591719.1-201ENST00000444669 744 ntBASIC1.97□□□□□ -2.09
SPG11Q96JI7 AL121594.1-201ENST00000475906 575 ntBASIC1.97□□□□□ -2.09
SPG11Q96JI7 AC093278.1-201ENST00000494700 600 ntBASIC1.97□□□□□ -2.09
SPG11Q96JI7 AC093311.1-201ENST00000506586 2021 ntBASIC1.97□□□□□ -2.09
SPG11Q96JI7 AC147055.1-201ENST00000509261 750 ntBASIC1.97□□□□□ -2.09
SPG11Q96JI7 AC034244.2-201ENST00000514668 858 ntBASIC1.97□□□□□ -2.09
SPG11Q96JI7 OR5D17P-201ENST00000531492 978 ntBASIC1.97□□□□□ -2.09
SPG11Q96JI7 AP000857.1-201ENST00000532151 543 ntBASIC1.97□□□□□ -2.09
SPG11Q96JI7 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC1.97□□□□□ -2.09
SPG11Q96JI7 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC1.97□□□□□ -2.09
SPG11Q96JI7 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC1.97□□□□□ -2.09
SPG11Q96JI7 WARS-244ENST00000627608 123 ntTSL 5 BASIC1.97□□□□□ -2.09
SPG11Q96JI7 MIR219B-201ENST00000637023 88 ntBASIC1.97□□□□□ -2.09
SPG11Q96JI7 AL606537.1-201ENST00000607258 2011 ntBASIC1.96□□□□□ -2.1
SPG11Q96JI7 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC1.96□□□□□ -2.1
SPG11Q96JI7 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.96□□□□□ -2.1
SPG11Q96JI7 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC1.96□□□□□ -2.1
SPG11Q96JI7 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
SPG11Q96JI7 RN7SKP140-201ENST00000411196 284 ntBASIC1.96□□□□□ -2.1
SPG11Q96JI7 PTP4A1P7-201ENST00000423476 514 ntBASIC1.96□□□□□ -2.1
SPG11Q96JI7 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC1.96□□□□□ -2.1
SPG11Q96JI7 AL353093.1-201ENST00000441292 436 ntBASIC1.96□□□□□ -2.1
SPG11Q96JI7 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.96□□□□□ -2.1
SPG11Q96JI7 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC1.96□□□□□ -2.1
SPG11Q96JI7 TXNP6-201ENST00000510190 310 ntBASIC1.96□□□□□ -2.1
SPG11Q96JI7 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
SPG11Q96JI7 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC1.96□□□□□ -2.1
SPG11Q96JI7 AC103710.2-201ENST00000609912 942 ntBASIC1.96□□□□□ -2.1
SPG11Q96JI7 FRG1DP-201ENST00000635586 771 ntBASIC1.96□□□□□ -2.1
SPG11Q96JI7 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
SPG11Q96JI7 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
SPG11Q96JI7 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC1.96□□□□□ -2.1
SPG11Q96JI7 RNA5SP502-201ENST00000362694 119 ntBASIC1.96□□□□□ -2.1
SPG11Q96JI7 UBE2V1P6-201ENST00000430840 422 ntBASIC1.96□□□□□ -2.1
SPG11Q96JI7 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC1.96□□□□□ -2.1
SPG11Q96JI7 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC1.96□□□□□ -2.1
SPG11Q96JI7 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.96□□□□□ -2.1
SPG11Q96JI7 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC1.96□□□□□ -2.1
SPG11Q96JI7 MIR6845-201ENST00000613182 61 ntBASIC1.96□□□□□ -2.1
SPG11Q96JI7 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.96□□□□□ -2.1
SPG11Q96JI7 MIR7153-201ENST00000637758 57 ntBASIC1.96□□□□□ -2.1
SPG11Q96JI7 CDC27P2-201ENST00000425026 1922 ntBASIC1.95□□□□□ -2.1
SPG11Q96JI7 PHKBP1-201ENST00000450951 1951 ntBASIC1.95□□□□□ -2.1
SPG11Q96JI7 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
SPG11Q96JI7 AL162578.1-201ENST00000406202 378 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms