Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 AL356321.1-201ENST00000621360 228 ntBASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 AC067931.1-201ENST00000624190 671 ntBASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 AC017104.4-201ENST00000636283 1592 ntBASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 ZNF33CP-201ENST00000432492 2030 ntBASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 AC126755.2-208ENST00000327792 462 ntBASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 AC138969.1-213ENST00000331436 462 ntBASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 EIF4A1P3-201ENST00000411521 244 ntBASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 AC009237.10-201ENST00000414112 510 ntBASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 TMSB10P2-201ENST00000416049 131 ntBASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 AC245052.5-201ENST00000416320 649 ntBASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 AC073464.1-201ENST00000429823 534 ntBASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 MTND1P2-201ENST00000430604 821 ntBASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 AC112653.1-201ENST00000443851 386 ntBASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 AL136380.1-201ENST00000447970 162 ntBASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 FABP3P2-201ENST00000453169 399 ntBASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 C1DP4-201ENST00000455429 424 ntBASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 RPS27AP17-201ENST00000463344 455 ntBASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 RPL5P30-201ENST00000465511 891 ntBASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 AL121769.1-201ENST00000469473 401 ntBASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 RPL21P126-201ENST00000470049 478 ntBASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 RN7SL41P-201ENST00000476144 297 ntBASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 AC012158.1-204ENST00000483430 465 ntBASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 AC021382.1-201ENST00000483523 359 ntBASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 PRDX4P1-201ENST00000507189 574 ntBASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 Vault.3-201ENST00000516676 95 ntBASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 AP001893.2-201ENST00000526949 202 ntBASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 FAM92A1P1-201ENST00000528023 890 ntBASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 AC123904.2-201ENST00000548059 300 ntBASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 AL845331.3-202ENST00000562856 261 ntBASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 AL160290.3-201ENST00000604869 165 ntBASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 MIR98-201ENST00000606724 119 ntBASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 AC009268.2-201ENST00000621925 457 ntBASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 EIF2AP4-201ENST00000424793 1781 ntBASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CTHRC1Q96CG8 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 MTND5P33-201ENST00000571250 1450 ntBASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 AL592437.2-201ENST00000421655 2434 ntBASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 OR5P1P-201ENST00000299512 925 ntBASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 RNU6-1103P-201ENST00000384150 107 ntBASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 RPL23AP32-201ENST00000395315 459 ntBASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 AL121834.1-202ENST00000404494 277 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms