Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.71□□□□□ -1.66
HPS3Q969F9 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
HPS3Q969F9 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HPS3Q969F9 AC027287.1-201ENST00000553115 1453 ntBASIC4.7□□□□□ -1.66
HPS3Q969F9 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.7□□□□□ -1.66
HPS3Q969F9 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HPS3Q969F9 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.7□□□□□ -1.66
HPS3Q969F9 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HPS3Q969F9 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.7□□□□□ -1.66
HPS3Q969F9 RNU1-14P-201ENST00000362759 152 ntBASIC4.7□□□□□ -1.66
HPS3Q969F9 RNU6-1207P-201ENST00000384343 107 ntBASIC4.7□□□□□ -1.66
HPS3Q969F9 Y_RNA.505-201ENST00000384489 102 ntBASIC4.7□□□□□ -1.66
HPS3Q969F9 Y_RNA.517-201ENST00000384551 106 ntBASIC4.7□□□□□ -1.66
HPS3Q969F9 RNU6-192P-201ENST00000391253 100 ntBASIC4.7□□□□□ -1.66
HPS3Q969F9 AIMP1P1-201ENST00000418670 937 ntBASIC4.7□□□□□ -1.66
HPS3Q969F9 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.7□□□□□ -1.66
HPS3Q969F9 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.7□□□□□ -1.66
HPS3Q969F9 snoU109.4-201ENST00000458953 143 ntBASIC4.7□□□□□ -1.66
HPS3Q969F9 RPL7P24-201ENST00000493052 752 ntBASIC4.7□□□□□ -1.66
HPS3Q969F9 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.7□□□□□ -1.66
HPS3Q969F9 RNU6-405P-201ENST00000516637 110 ntBASIC4.7□□□□□ -1.66
HPS3Q969F9 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.7□□□□□ -1.66
HPS3Q969F9 AP003392.2-201ENST00000527269 208 ntBASIC4.7□□□□□ -1.66
HPS3Q969F9 DEFB109D-201ENST00000529497 240 ntBASIC4.7□□□□□ -1.66
HPS3Q969F9 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.7□□□□□ -1.66
HPS3Q969F9 SETP2-201ENST00000553886 926 ntBASIC4.7□□□□□ -1.66
HPS3Q969F9 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.7□□□□□ -1.66
HPS3Q969F9 AC074050.1-201ENST00000563247 211 ntBASIC4.7□□□□□ -1.66
HPS3Q969F9 AC005951.1-201ENST00000576706 485 ntBASIC4.7□□□□□ -1.66
HPS3Q969F9 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.7□□□□□ -1.66
HPS3Q969F9 AL451044.1-201ENST00000604867 238 ntBASIC4.7□□□□□ -1.66
HPS3Q969F9 AC004853.1-201ENST00000604902 698 ntBASIC4.7□□□□□ -1.66
HPS3Q969F9 AL356218.2-201ENST00000605264 187 ntBASIC4.7□□□□□ -1.66
HPS3Q969F9 AL031666.3-201ENST00000609320 1006 ntBASIC4.7□□□□□ -1.66
HPS3Q969F9 AC008250.2-201ENST00000615261 205 ntBASIC4.7□□□□□ -1.66
HPS3Q969F9 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.7□□□□□ -1.66
HPS3Q969F9 AL359740.1-201ENST00000624340 592 ntBASIC4.7□□□□□ -1.66
HPS3Q969F9 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.7□□□□□ -1.66
HPS3Q969F9 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HPS3Q969F9 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
HPS3Q969F9 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HPS3Q969F9 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HPS3Q969F9 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HPS3Q969F9 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.7□□□□□ -1.66
HPS3Q969F9 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.7□□□□□ -1.66
HPS3Q969F9 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HPS3Q969F9 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
HPS3Q969F9 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HPS3Q969F9 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HPS3Q969F9 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
HPS3Q969F9 AC011266.1-201ENST00000624119 3569 ntBASIC4.69□□□□□ -1.66
HPS3Q969F9 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
HPS3Q969F9 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
HPS3Q969F9 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HPS3Q969F9 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HPS3Q969F9 RNA5SP28-201ENST00000363841 119 ntBASIC4.69□□□□□ -1.66
HPS3Q969F9 RNA5SP509-201ENST00000364577 119 ntBASIC4.69□□□□□ -1.66
HPS3Q969F9 AC068538.1-201ENST00000376856 336 ntBASIC4.69□□□□□ -1.66
HPS3Q969F9 RNU6-1279P-201ENST00000383917 103 ntBASIC4.69□□□□□ -1.66
HPS3Q969F9 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HPS3Q969F9 Y_RNA.608-201ENST00000410647 95 ntBASIC4.69□□□□□ -1.66
HPS3Q969F9 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.69□□□□□ -1.66
HPS3Q969F9 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.69□□□□□ -1.66
HPS3Q969F9 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.69□□□□□ -1.66
HPS3Q969F9 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.69□□□□□ -1.66
HPS3Q969F9 AC108734.1-201ENST00000439549 399 ntBASIC4.69□□□□□ -1.66
HPS3Q969F9 AC098824.1-201ENST00000453565 980 ntBASIC4.69□□□□□ -1.66
HPS3Q969F9 AP1S2P1-201ENST00000457344 379 ntBASIC4.69□□□□□ -1.66
HPS3Q969F9 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.69□□□□□ -1.66
HPS3Q969F9 OR9M1P-201ENST00000459641 921 ntBASIC4.69□□□□□ -1.66
HPS3Q969F9 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HPS3Q969F9 AC007537.2-201ENST00000472093 511 ntBASIC4.69□□□□□ -1.66
HPS3Q969F9 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.69□□□□□ -1.66
HPS3Q969F9 AF213884.1-201ENST00000488102 463 ntBASIC4.69□□□□□ -1.66
HPS3Q969F9 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.69□□□□□ -1.66
HPS3Q969F9 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
HPS3Q969F9 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HPS3Q969F9 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.69□□□□□ -1.66
HPS3Q969F9 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
HPS3Q969F9 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.69□□□□□ -1.66
HPS3Q969F9 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.69□□□□□ -1.66
HPS3Q969F9 RN7SKP298-201ENST00000515950 94 ntBASIC4.69□□□□□ -1.66
HPS3Q969F9 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.69□□□□□ -1.66
HPS3Q969F9 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.69□□□□□ -1.66
HPS3Q969F9 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.69□□□□□ -1.66
HPS3Q969F9 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.69□□□□□ -1.66
HPS3Q969F9 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HPS3Q969F9 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.69□□□□□ -1.66
HPS3Q969F9 IGHV3-29-201ENST00000604817 344 ntBASIC4.69□□□□□ -1.66
HPS3Q969F9 AC138749.5-201ENST00000611461 208 ntBASIC4.69□□□□□ -1.66
HPS3Q969F9 AC131902.3-201ENST00000611767 581 ntBASIC4.69□□□□□ -1.66
HPS3Q969F9 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.69□□□□□ -1.66
HPS3Q969F9 AC116165.2-201ENST00000616705 206 ntBASIC4.69□□□□□ -1.66
HPS3Q969F9 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.69□□□□□ -1.66
HPS3Q969F9 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
HPS3Q969F9 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.69□□□□□ -1.66
HPS3Q969F9 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HPS3Q969F9 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.69□□□□□ -1.66
HPS3Q969F9 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HPS3Q969F9 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms