Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 snoU109.4-201ENST00000458953 143 ntBASIC4.19□□□□□ -1.74
HMGB4Q8WW32 RPL38P1-201ENST00000460914 211 ntBASIC4.19□□□□□ -1.74
HMGB4Q8WW32 HMGB1P25-201ENST00000468402 607 ntBASIC4.19□□□□□ -1.74
HMGB4Q8WW32 AC034222.1-201ENST00000494052 532 ntBASIC4.19□□□□□ -1.74
HMGB4Q8WW32 AC108145.1-201ENST00000503770 153 ntBASIC4.19□□□□□ -1.74
HMGB4Q8WW32 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.19□□□□□ -1.74
HMGB4Q8WW32 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.19□□□□□ -1.74
HMGB4Q8WW32 MTCO3P7-201ENST00000510008 774 ntBASIC4.19□□□□□ -1.74
HMGB4Q8WW32 FABP5P5-201ENST00000515537 406 ntBASIC4.19□□□□□ -1.74
HMGB4Q8WW32 RNU6-714P-201ENST00000516963 103 ntBASIC4.19□□□□□ -1.74
HMGB4Q8WW32 HMGB1P19-201ENST00000517578 577 ntBASIC4.19□□□□□ -1.74
HMGB4Q8WW32 DEFB109D-201ENST00000529497 240 ntBASIC4.19□□□□□ -1.74
HMGB4Q8WW32 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.19□□□□□ -1.74
HMGB4Q8WW32 OR6C73P-201ENST00000546432 358 ntBASIC4.19□□□□□ -1.74
HMGB4Q8WW32 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.19□□□□□ -1.74
HMGB4Q8WW32 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC4.19□□□□□ -1.74
HMGB4Q8WW32 HSPE1P5-201ENST00000561489 272 ntBASIC4.19□□□□□ -1.74
HMGB4Q8WW32 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC4.19□□□□□ -1.74
HMGB4Q8WW32 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.19□□□□□ -1.74
HMGB4Q8WW32 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.19□□□□□ -1.74
HMGB4Q8WW32 AC010680.3-201ENST00000604215 520 ntBASIC4.19□□□□□ -1.74
HMGB4Q8WW32 AC112230.1-201ENST00000604342 547 ntBASIC4.19□□□□□ -1.74
HMGB4Q8WW32 AC004853.1-201ENST00000604902 698 ntBASIC4.19□□□□□ -1.74
HMGB4Q8WW32 AL451086.1-201ENST00000605596 223 ntBASIC4.19□□□□□ -1.74
HMGB4Q8WW32 HULC.1-201ENST00000612720 240 ntBASIC4.19□□□□□ -1.74
HMGB4Q8WW32 AC009509.4-201ENST00000619202 509 ntBASIC4.19□□□□□ -1.74
HMGB4Q8WW32 AC092656.1-203ENST00000624134 423 ntBASIC4.19□□□□□ -1.74
HMGB4Q8WW32 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
HMGB4Q8WW32 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.19□□□□□ -1.74
HMGB4Q8WW32 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
HMGB4Q8WW32 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
HMGB4Q8WW32 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HMGB4Q8WW32 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HMGB4Q8WW32 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HMGB4Q8WW32 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
HMGB4Q8WW32 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HMGB4Q8WW32 AC016588.2-201ENST00000632484 3021 ntBASIC4.19□□□□□ -1.74
HMGB4Q8WW32 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HMGB4Q8WW32 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HMGB4Q8WW32 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HMGB4Q8WW32 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HMGB4Q8WW32 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.18□□□□□ -1.74
HMGB4Q8WW32 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.18□□□□□ -1.74
HMGB4Q8WW32 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.18□□□□□ -1.74
HMGB4Q8WW32 RNU6-1279P-201ENST00000383917 103 ntBASIC4.18□□□□□ -1.74
HMGB4Q8WW32 MIR200C-201ENST00000384980 68 ntBASIC4.18□□□□□ -1.74
HMGB4Q8WW32 AL590704.1-201ENST00000402856 794 ntBASIC4.18□□□□□ -1.74
HMGB4Q8WW32 AL356421.1-201ENST00000403255 413 ntBASIC4.18□□□□□ -1.74
HMGB4Q8WW32 HSPE1P12-201ENST00000412576 301 ntBASIC4.18□□□□□ -1.74
HMGB4Q8WW32 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.18□□□□□ -1.74
HMGB4Q8WW32 AC245052.5-201ENST00000416320 649 ntBASIC4.18□□□□□ -1.74
HMGB4Q8WW32 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.18□□□□□ -1.74
HMGB4Q8WW32 Z97055.1-201ENST00000419730 712 ntBASIC4.18□□□□□ -1.74
HMGB4Q8WW32 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.18□□□□□ -1.74
HMGB4Q8WW32 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.18□□□□□ -1.74
HMGB4Q8WW32 AL691449.1-201ENST00000426570 421 ntBASIC4.18□□□□□ -1.74
HMGB4Q8WW32 GOT2P5-201ENST00000433995 546 ntBASIC4.18□□□□□ -1.74
HMGB4Q8WW32 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.18□□□□□ -1.74
HMGB4Q8WW32 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
HMGB4Q8WW32 AC005008.1-201ENST00000456151 612 ntBASIC4.18□□□□□ -1.74
HMGB4Q8WW32 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.18□□□□□ -1.74
HMGB4Q8WW32 snoU13.8-201ENST00000458890 104 ntBASIC4.18□□□□□ -1.74
HMGB4Q8WW32 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.18□□□□□ -1.74
HMGB4Q8WW32 AC108022.1-201ENST00000493466 478 ntBASIC4.18□□□□□ -1.74
HMGB4Q8WW32 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
HMGB4Q8WW32 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
HMGB4Q8WW32 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.18□□□□□ -1.74
HMGB4Q8WW32 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HMGB4Q8WW32 OR4P1P-201ENST00000530808 1136 ntBASIC4.18□□□□□ -1.74
HMGB4Q8WW32 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.18□□□□□ -1.74
HMGB4Q8WW32 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.18□□□□□ -1.74
HMGB4Q8WW32 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.18□□□□□ -1.74
HMGB4Q8WW32 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC4.18□□□□□ -1.74
HMGB4Q8WW32 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.18□□□□□ -1.74
HMGB4Q8WW32 MIR5697-201ENST00000578045 78 ntBASIC4.18□□□□□ -1.74
HMGB4Q8WW32 AC024220.1-201ENST00000603675 484 ntBASIC4.18□□□□□ -1.74
HMGB4Q8WW32 AL451044.1-201ENST00000604867 238 ntBASIC4.18□□□□□ -1.74
HMGB4Q8WW32 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.18□□□□□ -1.74
HMGB4Q8WW32 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HMGB4Q8WW32 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
HMGB4Q8WW32 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.18□□□□□ -1.74
HMGB4Q8WW32 AC104010.1-201ENST00000616889 150 ntBASIC4.18□□□□□ -1.74
HMGB4Q8WW32 CR392039.5-201ENST00000623201 510 ntBASIC4.18□□□□□ -1.74
HMGB4Q8WW32 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.18□□□□□ -1.74
HMGB4Q8WW32 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.18□□□□□ -1.74
HMGB4Q8WW32 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.18□□□□□ -1.74
HMGB4Q8WW32 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
HMGB4Q8WW32 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.18□□□□□ -1.74
HMGB4Q8WW32 AC116667.1-201ENST00000604855 2072 ntBASIC4.18□□□□□ -1.74
HMGB4Q8WW32 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
HMGB4Q8WW32 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
HMGB4Q8WW32 AC027287.1-201ENST00000553115 1453 ntBASIC4.18□□□□□ -1.74
HMGB4Q8WW32 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HMGB4Q8WW32 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HMGB4Q8WW32 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.17□□□□□ -1.74
HMGB4Q8WW32 CCT4P2-201ENST00000233836 1548 ntBASIC4.17□□□□□ -1.74
HMGB4Q8WW32 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HMGB4Q8WW32 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HMGB4Q8WW32 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
HMGB4Q8WW32 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms