Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RNU4-72P-201ENST00000410754 173 ntBASIC3.92□□□□□ -1.78
SNED1Q8TER0 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.92□□□□□ -1.78
SNED1Q8TER0 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.92□□□□□ -1.78
SNED1Q8TER0 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.92□□□□□ -1.78
SNED1Q8TER0 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SNED1Q8TER0 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.92□□□□□ -1.78
SNED1Q8TER0 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.92□□□□□ -1.78
SNED1Q8TER0 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.92□□□□□ -1.78
SNED1Q8TER0 ELOCP23-201ENST00000452014 332 ntBASIC3.92□□□□□ -1.78
SNED1Q8TER0 MTCO3P20-201ENST00000454926 688 ntBASIC3.92□□□□□ -1.78
SNED1Q8TER0 AC011037.1-201ENST00000483964 558 ntBASIC3.92□□□□□ -1.78
SNED1Q8TER0 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.92□□□□□ -1.78
SNED1Q8TER0 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.92□□□□□ -1.78
SNED1Q8TER0 MTCYBP37-201ENST00000510642 1133 ntBASIC3.92□□□□□ -1.78
SNED1Q8TER0 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.92□□□□□ -1.78
SNED1Q8TER0 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.92□□□□□ -1.78
SNED1Q8TER0 RNU6-1028P-201ENST00000517164 93 ntBASIC3.92□□□□□ -1.78
SNED1Q8TER0 HMGB1P1-201ENST00000522557 636 ntBASIC3.92□□□□□ -1.78
SNED1Q8TER0 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.92□□□□□ -1.78
SNED1Q8TER0 MTND2P26-201ENST00000528255 1029 ntBASIC3.92□□□□□ -1.78
SNED1Q8TER0 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SNED1Q8TER0 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.92□□□□□ -1.78
SNED1Q8TER0 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.92□□□□□ -1.78
SNED1Q8TER0 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.92□□□□□ -1.78
SNED1Q8TER0 DEFB131E-202ENST00000602581 683 ntBASIC3.92□□□□□ -1.78
SNED1Q8TER0 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.92□□□□□ -1.78
SNED1Q8TER0 AC245297.2-201ENST00000610119 565 ntBASIC3.92□□□□□ -1.78
SNED1Q8TER0 TUSC7.1-201ENST00000610969 165 ntBASIC3.92□□□□□ -1.78
SNED1Q8TER0 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.92□□□□□ -1.78
SNED1Q8TER0 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.92□□□□□ -1.78
SNED1Q8TER0 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.92□□□□□ -1.78
SNED1Q8TER0 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SNED1Q8TER0 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.91□□□□□ -1.78
SNED1Q8TER0 RNF6P1-201ENST00000444889 1784 ntBASIC3.91□□□□□ -1.78
SNED1Q8TER0 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.91□□□□□ -1.78
SNED1Q8TER0 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.91□□□□□ -1.78
SNED1Q8TER0 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
SNED1Q8TER0 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
SNED1Q8TER0 ZNF90P1-201ENST00000480493 1951 ntBASIC3.91□□□□□ -1.78
SNED1Q8TER0 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SNED1Q8TER0 RNU5B-1-201ENST00000363286 116 ntBASIC3.91□□□□□ -1.78
SNED1Q8TER0 RNU6-7-201ENST00000364784 107 ntBASIC3.91□□□□□ -1.78
SNED1Q8TER0 RNU6-8-201ENST00000365467 107 ntBASIC3.91□□□□□ -1.78
SNED1Q8TER0 AL139095.1-201ENST00000404326 391 ntBASIC3.91□□□□□ -1.78
SNED1Q8TER0 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.91□□□□□ -1.78
SNED1Q8TER0 AC022028.1-201ENST00000412054 408 ntBASIC3.91□□□□□ -1.78
SNED1Q8TER0 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.91□□□□□ -1.78
SNED1Q8TER0 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.91□□□□□ -1.78
SNED1Q8TER0 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.91□□□□□ -1.78
SNED1Q8TER0 AL135938.1-201ENST00000443141 297 ntBASIC3.91□□□□□ -1.78
SNED1Q8TER0 EXTL2P1-201ENST00000446218 416 ntBASIC3.91□□□□□ -1.78
SNED1Q8TER0 PTENP1-201ENST00000447117 1215 ntBASIC3.91□□□□□ -1.78
SNED1Q8TER0 AC008264.1-201ENST00000447612 367 ntBASIC3.91□□□□□ -1.78
SNED1Q8TER0 AC005410.1-202ENST00000460347 485 ntBASIC3.91□□□□□ -1.78
SNED1Q8TER0 KC877373.1-201ENST00000479066 408 ntBASIC3.91□□□□□ -1.78
SNED1Q8TER0 AC113430.1-201ENST00000506872 718 ntBASIC3.91□□□□□ -1.78
SNED1Q8TER0 AC010625.1-201ENST00000511296 403 ntBASIC3.91□□□□□ -1.78
SNED1Q8TER0 AC133963.2-201ENST00000513686 578 ntBASIC3.91□□□□□ -1.78
SNED1Q8TER0 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.91□□□□□ -1.78
SNED1Q8TER0 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.91□□□□□ -1.78
SNED1Q8TER0 NF1P5-201ENST00000588287 448 ntBASIC3.91□□□□□ -1.78
SNED1Q8TER0 AL035411.2-201ENST00000604022 421 ntBASIC3.91□□□□□ -1.78
SNED1Q8TER0 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.91□□□□□ -1.78
SNED1Q8TER0 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SNED1Q8TER0 AC123767.1-202ENST00000620407 817 ntBASIC3.91□□□□□ -1.78
SNED1Q8TER0 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SNED1Q8TER0 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.91□□□□□ -1.78
SNED1Q8TER0 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.91□□□□□ -1.78
SNED1Q8TER0 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
SNED1Q8TER0 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.91□□□□□ -1.78
SNED1Q8TER0 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.91□□□□□ -1.78
SNED1Q8TER0 MTND4P34-201ENST00000572715 1371 ntBASIC3.91□□□□□ -1.78
SNED1Q8TER0 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
SNED1Q8TER0 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SNED1Q8TER0 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SNED1Q8TER0 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SNED1Q8TER0 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.9□□□□□ -1.78
SNED1Q8TER0 MAPK10-373ENST00000641983 6772 ntBASIC3.9□□□□□ -1.78
SNED1Q8TER0 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
SNED1Q8TER0 AC017071.1-201ENST00000564407 2204 ntBASIC3.9□□□□□ -1.78
SNED1Q8TER0 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.9□□□□□ -1.78
SNED1Q8TER0 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.9□□□□□ -1.78
SNED1Q8TER0 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
SNED1Q8TER0 OR5J1P-201ENST00000313544 939 ntBASIC3.9□□□□□ -1.78
SNED1Q8TER0 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
SNED1Q8TER0 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.9□□□□□ -1.78
SNED1Q8TER0 Y_RNA.51-201ENST00000362725 102 ntBASIC3.9□□□□□ -1.78
SNED1Q8TER0 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.9□□□□□ -1.78
SNED1Q8TER0 AL355379.1-201ENST00000405542 640 ntBASIC3.9□□□□□ -1.78
SNED1Q8TER0 RN7SKP220-201ENST00000410611 288 ntBASIC3.9□□□□□ -1.78
SNED1Q8TER0 AL158825.1-201ENST00000414735 521 ntBASIC3.9□□□□□ -1.78
SNED1Q8TER0 MTND4P3-201ENST00000417829 541 ntBASIC3.9□□□□□ -1.78
SNED1Q8TER0 AC012065.2-201ENST00000421295 375 ntBASIC3.9□□□□□ -1.78
SNED1Q8TER0 RPL30P3-201ENST00000424262 333 ntBASIC3.9□□□□□ -1.78
SNED1Q8TER0 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.9□□□□□ -1.78
SNED1Q8TER0 SETP5-201ENST00000437270 562 ntBASIC3.9□□□□□ -1.78
SNED1Q8TER0 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.9□□□□□ -1.78
SNED1Q8TER0 MTND1P1-201ENST00000445453 368 ntBASIC3.9□□□□□ -1.78
SNED1Q8TER0 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.9□□□□□ -1.78
SNED1Q8TER0 AC092754.2-201ENST00000463506 460 ntBASIC3.9□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms