Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 FAM92A1P1-201ENST00000528023 890 ntBASIC4.51□□□□□ -1.69
SLC44A3Q8N4M1 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.51□□□□□ -1.69
SLC44A3Q8N4M1 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.51□□□□□ -1.69
SLC44A3Q8N4M1 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.51□□□□□ -1.69
SLC44A3Q8N4M1 UBE2V2P2-201ENST00000587677 504 ntBASIC4.51□□□□□ -1.69
SLC44A3Q8N4M1 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.51□□□□□ -1.69
SLC44A3Q8N4M1 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.51□□□□□ -1.69
SLC44A3Q8N4M1 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SLC44A3Q8N4M1 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SLC44A3Q8N4M1 AC000123.3-201ENST00000624029 4975 ntBASIC4.51□□□□□ -1.69
SLC44A3Q8N4M1 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 OR11H4-201ENST00000315409 1082 ntBASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 U8.3-201ENST00000363321 132 ntBASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 RNA5SP130-201ENST00000364431 114 ntBASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 XGY1-201ENST00000381172 446 ntBASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 Y_RNA.509-201ENST00000384506 99 ntBASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 SNORD115.1-201ENST00000391109 76 ntBASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 RN7SKP285-201ENST00000410137 318 ntBASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 NPM1P34-201ENST00000428821 893 ntBASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 MTCO3P21-201ENST00000430791 643 ntBASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 AC007389.2-201ENST00000434630 306 ntBASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 AP000936.3-201ENST00000438127 255 ntBASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 LSM1P1-201ENST00000438629 273 ntBASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 AC114495.1-201ENST00000441274 436 ntBASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 Z82190.1-201ENST00000454534 490 ntBASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 BTF3P5-201ENST00000457252 467 ntBASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 RPL7L1P8-201ENST00000469911 741 ntBASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 RBM43P1-201ENST00000476891 1081 ntBASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 AC090502.2-201ENST00000549267 280 ntBASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 AP001180.3-201ENST00000582221 145 ntBASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 AC008687.2-201ENST00000597865 520 ntBASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 AC087045.1-201ENST00000605856 382 ntBASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 AC023813.4-201ENST00000607580 580 ntBASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 PISRT1-201ENST00000626175 531 ntBASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 MIR1321-201ENST00000637766 79 ntBASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 AC138915.3-201ENST00000562908 1389 ntBASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SLC44A3Q8N4M1 Z95327.2-201ENST00000414579 1873 ntBASIC4.49□□□□□ -1.69
SLC44A3Q8N4M1 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
SLC44A3Q8N4M1 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SLC44A3Q8N4M1 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
SLC44A3Q8N4M1 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
SLC44A3Q8N4M1 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.49□□□□□ -1.69
SLC44A3Q8N4M1 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
SLC44A3Q8N4M1 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SLC44A3Q8N4M1 RLIMP1-201ENST00000339626 1680 ntBASIC4.49□□□□□ -1.69
SLC44A3Q8N4M1 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SLC44A3Q8N4M1 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
SLC44A3Q8N4M1 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
SLC44A3Q8N4M1 Y_RNA.295-201ENST00000364918 102 ntBASIC4.49□□□□□ -1.69
SLC44A3Q8N4M1 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
SLC44A3Q8N4M1 RNU6-1009P-201ENST00000390996 107 ntBASIC4.49□□□□□ -1.69
SLC44A3Q8N4M1 AL121972.1-201ENST00000402023 252 ntBASIC4.49□□□□□ -1.69
SLC44A3Q8N4M1 HMGB1P17-201ENST00000403495 628 ntBASIC4.49□□□□□ -1.69
SLC44A3Q8N4M1 SNORA11.1-201ENST00000408133 129 ntBASIC4.49□□□□□ -1.69
SLC44A3Q8N4M1 RNU2-28P-201ENST00000410457 189 ntBASIC4.49□□□□□ -1.69
SLC44A3Q8N4M1 RPL21P111-201ENST00000418453 477 ntBASIC4.49□□□□□ -1.69
SLC44A3Q8N4M1 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC4.49□□□□□ -1.69
SLC44A3Q8N4M1 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SLC44A3Q8N4M1 USP9YP36-201ENST00000424581 829 ntBASIC4.49□□□□□ -1.69
SLC44A3Q8N4M1 MTCO1P20-201ENST00000425366 358 ntBASIC4.49□□□□□ -1.69
SLC44A3Q8N4M1 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SLC44A3Q8N4M1 COX6B1P7-201ENST00000430845 235 ntBASIC4.49□□□□□ -1.69
SLC44A3Q8N4M1 AC023347.2-201ENST00000433994 462 ntBASIC4.49□□□□□ -1.69
SLC44A3Q8N4M1 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.49□□□□□ -1.69
SLC44A3Q8N4M1 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SLC44A3Q8N4M1 OR6K1P-201ENST00000456766 971 ntBASIC4.49□□□□□ -1.69
SLC44A3Q8N4M1 AC005229.2-201ENST00000456995 399 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms