Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC60Q8IWA6 ARL2BPP5-201ENST00000523141 481 ntBASIC3.72□□□□□ -1.81
CCDC60Q8IWA6 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC60Q8IWA6 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.72□□□□□ -1.81
CCDC60Q8IWA6 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC60Q8IWA6 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.72□□□□□ -1.81
CCDC60Q8IWA6 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.72□□□□□ -1.81
CCDC60Q8IWA6 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.72□□□□□ -1.81
CCDC60Q8IWA6 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC60Q8IWA6 MIR5680-201ENST00000577577 84 ntBASIC3.72□□□□□ -1.81
CCDC60Q8IWA6 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC60Q8IWA6 AL390838.2-201ENST00000602394 274 ntBASIC3.72□□□□□ -1.81
CCDC60Q8IWA6 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC60Q8IWA6 AC009464.1-201ENST00000615731 469 ntBASIC3.72□□□□□ -1.81
CCDC60Q8IWA6 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC60Q8IWA6 AC011978.2-201ENST00000569835 2054 ntBASIC3.72□□□□□ -1.81
CCDC60Q8IWA6 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC60Q8IWA6 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC60Q8IWA6 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
CCDC60Q8IWA6 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
CCDC60Q8IWA6 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC60Q8IWA6 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC60Q8IWA6 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
CCDC60Q8IWA6 RNU6-251P-201ENST00000363235 104 ntBASIC3.71□□□□□ -1.82
CCDC60Q8IWA6 RNU6-657P-201ENST00000383904 107 ntBASIC3.71□□□□□ -1.82
CCDC60Q8IWA6 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.71□□□□□ -1.82
CCDC60Q8IWA6 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC60Q8IWA6 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC60Q8IWA6 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC60Q8IWA6 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC60Q8IWA6 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC60Q8IWA6 AC008264.1-201ENST00000447612 367 ntBASIC3.71□□□□□ -1.82
CCDC60Q8IWA6 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC60Q8IWA6 ZNF736P8Y-201ENST00000451913 669 ntBASIC3.71□□□□□ -1.82
CCDC60Q8IWA6 OFD1P3Y-201ENST00000453312 783 ntBASIC3.71□□□□□ -1.82
CCDC60Q8IWA6 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC60Q8IWA6 RFC5P1-201ENST00000454419 874 ntBASIC3.71□□□□□ -1.82
CCDC60Q8IWA6 AC010301.1-201ENST00000473936 355 ntBASIC3.71□□□□□ -1.82
CCDC60Q8IWA6 OR4G11P-201ENST00000492842 939 ntBASIC3.71□□□□□ -1.82
CCDC60Q8IWA6 MTCYBP16-201ENST00000509187 1129 ntBASIC3.71□□□□□ -1.82
CCDC60Q8IWA6 PHBP14-201ENST00000512887 367 ntBASIC3.71□□□□□ -1.82
CCDC60Q8IWA6 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC60Q8IWA6 RNU6-1225P-201ENST00000516336 65 ntBASIC3.71□□□□□ -1.82
CCDC60Q8IWA6 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC60Q8IWA6 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.71□□□□□ -1.82
CCDC60Q8IWA6 AP004242.1-201ENST00000533701 349 ntBASIC3.71□□□□□ -1.82
CCDC60Q8IWA6 LSM6P2-201ENST00000552208 177 ntBASIC3.71□□□□□ -1.82
CCDC60Q8IWA6 AC023158.2-201ENST00000614876 543 ntBASIC3.71□□□□□ -1.82
CCDC60Q8IWA6 AC068722.2-201ENST00000618734 544 ntBASIC3.71□□□□□ -1.82
CCDC60Q8IWA6 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.71□□□□□ -1.82
CCDC60Q8IWA6 AC008993.2-201ENST00000631744 806 ntBASIC3.71□□□□□ -1.82
CCDC60Q8IWA6 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC60Q8IWA6 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.71□□□□□ -1.82
CCDC60Q8IWA6 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC60Q8IWA6 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC60Q8IWA6 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 SNORA38.1-201ENST00000364172 131 ntBASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 Y_RNA.408-201ENST00000383987 102 ntBASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 Y_RNA.465-201ENST00000384293 102 ntBASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 U3.19-201ENST00000390893 196 ntBASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 AL355379.1-201ENST00000405542 640 ntBASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 AL590084.1-201ENST00000407885 387 ntBASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 RNU2-28P-201ENST00000410457 189 ntBASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 AC126124.2-201ENST00000413542 321 ntBASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 AC127526.1-201ENST00000417526 366 ntBASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 RPL31P54-201ENST00000429803 370 ntBASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 AL158071.1-201ENST00000430315 461 ntBASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 AC084290.1-201ENST00000434995 374 ntBASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 SNORD11.1-201ENST00000459482 85 ntBASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 RN7SL504P-201ENST00000494496 287 ntBASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 AC091951.3-201ENST00000504093 246 ntBASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 AC104057.1-201ENST00000515547 497 ntBASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 HIGD1AP3-201ENST00000515857 278 ntBASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 AC090502.2-201ENST00000549267 280 ntBASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 MTND4P33-201ENST00000556706 766 ntBASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 AL132657.2-201ENST00000564417 358 ntBASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 AC012493.2-201ENST00000595083 291 ntBASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 AC091057.2-201ENST00000602594 792 ntBASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 AC007687.1-201ENST00000602704 304 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms