Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 U1.1-201ENST00000384101 164 ntBASIC4.89□□□□□ -1.63
UBE3BQ7Z3V4 RNU6-146P-201ENST00000384602 108 ntBASIC4.89□□□□□ -1.63
UBE3BQ7Z3V4 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
UBE3BQ7Z3V4 RNU2-28P-201ENST00000410457 189 ntBASIC4.89□□□□□ -1.63
UBE3BQ7Z3V4 OR4F13P-201ENST00000428478 931 ntBASIC4.89□□□□□ -1.63
UBE3BQ7Z3V4 AC018644.1-201ENST00000429934 551 ntBASIC4.89□□□□□ -1.63
UBE3BQ7Z3V4 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.89□□□□□ -1.63
UBE3BQ7Z3V4 RPL37P1-201ENST00000432310 284 ntBASIC4.89□□□□□ -1.63
UBE3BQ7Z3V4 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.89□□□□□ -1.63
UBE3BQ7Z3V4 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.89□□□□□ -1.63
UBE3BQ7Z3V4 MTND1P1-201ENST00000445453 368 ntBASIC4.89□□□□□ -1.63
UBE3BQ7Z3V4 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.89□□□□□ -1.63
UBE3BQ7Z3V4 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.89□□□□□ -1.63
UBE3BQ7Z3V4 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.89□□□□□ -1.63
UBE3BQ7Z3V4 RPS20P21-201ENST00000466859 343 ntBASIC4.89□□□□□ -1.63
UBE3BQ7Z3V4 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.89□□□□□ -1.63
UBE3BQ7Z3V4 OR4G11P-201ENST00000492842 939 ntBASIC4.89□□□□□ -1.63
UBE3BQ7Z3V4 AP002812.1-201ENST00000495378 474 ntBASIC4.89□□□□□ -1.63
UBE3BQ7Z3V4 AC025445.1-201ENST00000502728 300 ntBASIC4.89□□□□□ -1.63
UBE3BQ7Z3V4 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.89□□□□□ -1.63
UBE3BQ7Z3V4 AC006499.6-201ENST00000511169 607 ntBASIC4.89□□□□□ -1.63
UBE3BQ7Z3V4 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.89□□□□□ -1.63
UBE3BQ7Z3V4 SOD1P3-201ENST00000518682 454 ntBASIC4.89□□□□□ -1.63
UBE3BQ7Z3V4 OR4A12P-201ENST00000530847 918 ntBASIC4.89□□□□□ -1.63
UBE3BQ7Z3V4 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
UBE3BQ7Z3V4 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.89□□□□□ -1.63
UBE3BQ7Z3V4 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC4.89□□□□□ -1.63
UBE3BQ7Z3V4 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.89□□□□□ -1.63
UBE3BQ7Z3V4 HNRNPCP4-201ENST00000571636 900 ntBASIC4.89□□□□□ -1.63
UBE3BQ7Z3V4 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.89□□□□□ -1.63
UBE3BQ7Z3V4 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.89□□□□□ -1.63
UBE3BQ7Z3V4 AC112230.1-201ENST00000604342 547 ntBASIC4.89□□□□□ -1.63
UBE3BQ7Z3V4 AC112187.2-201ENST00000604345 283 ntBASIC4.89□□□□□ -1.63
UBE3BQ7Z3V4 MIR92B-201ENST00000607575 96 ntBASIC4.89□□□□□ -1.63
UBE3BQ7Z3V4 AC243773.3-201ENST00000613270 256 ntBASIC4.89□□□□□ -1.63
UBE3BQ7Z3V4 AL603839.4-201ENST00000624658 1005 ntBASIC4.89□□□□□ -1.63
UBE3BQ7Z3V4 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.89□□□□□ -1.63
UBE3BQ7Z3V4 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
UBE3BQ7Z3V4 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
UBE3BQ7Z3V4 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 Y_RNA.97-201ENST00000363094 102 ntBASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 RNU6-259P-201ENST00000383999 107 ntBASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 MTCYBP36-201ENST00000404146 440 ntBASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 HMGB1P11-201ENST00000413899 637 ntBASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 MTND1P23-201ENST00000416931 372 ntBASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 GOT2P5-201ENST00000433995 546 ntBASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 AC092427.1-201ENST00000439177 601 ntBASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 VN1R10P-201ENST00000447106 875 ntBASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 MTCO1P48-201ENST00000448024 1096 ntBASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 AL133547.1-201ENST00000448546 220 ntBASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 APOOP2-201ENST00000461561 539 ntBASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 SLC25A15P5-201ENST00000508033 253 ntBASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 RN7SKP298-201ENST00000515950 94 ntBASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 RN7SKP96-201ENST00000516948 297 ntBASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 AC025881.1-201ENST00000518851 512 ntBASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 AP002360.4-201ENST00000606980 481 ntBASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 AC006566.1-201ENST00000608943 513 ntBASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 AC007684.1-201ENST00000609671 477 ntBASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 AC025588.4-201ENST00000615802 908 ntBASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 AL139089.1-201ENST00000620372 975 ntBASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 ANKRD36BP1-202ENST00000604892 1417 ntBASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
UBE3BQ7Z3V4 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
UBE3BQ7Z3V4 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
UBE3BQ7Z3V4 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
UBE3BQ7Z3V4 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
UBE3BQ7Z3V4 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
UBE3BQ7Z3V4 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
UBE3BQ7Z3V4 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
UBE3BQ7Z3V4 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
UBE3BQ7Z3V4 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
UBE3BQ7Z3V4 RNU1-85P-201ENST00000364127 164 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms