Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DQA1Q5Y7H0 RNU2-50P-201ENST00000410494 143 ntBASIC4.85□□□□□ -1.63
HLA-DQA1Q5Y7H0 RN7SKP126-201ENST00000411143 300 ntBASIC4.85□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC114491.1-201ENST00000416095 246 ntBASIC4.85□□□□□ -1.63
HLA-DQA1Q5Y7H0 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.85□□□□□ -1.63
HLA-DQA1Q5Y7H0 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.85□□□□□ -1.63
HLA-DQA1Q5Y7H0 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DQA1Q5Y7H0 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.85□□□□□ -1.63
HLA-DQA1Q5Y7H0 AL163193.1-201ENST00000444895 788 ntBASIC4.85□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC020550.1-201ENST00000447385 163 ntBASIC4.85□□□□□ -1.63
HLA-DQA1Q5Y7H0 SNRPFP3-201ENST00000457792 225 ntBASIC4.85□□□□□ -1.63
HLA-DQA1Q5Y7H0 RPS26P39-201ENST00000469206 341 ntBASIC4.85□□□□□ -1.63
HLA-DQA1Q5Y7H0 UBA52P7-201ENST00000486088 380 ntBASIC4.85□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC072052.1-201ENST00000496556 306 ntBASIC4.85□□□□□ -1.63
HLA-DQA1Q5Y7H0 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.85□□□□□ -1.63
HLA-DQA1Q5Y7H0 RNA5SP34-201ENST00000516887 130 ntBASIC4.85□□□□□ -1.63
HLA-DQA1Q5Y7H0 MTND4P7-201ENST00000523876 130 ntBASIC4.85□□□□□ -1.63
HLA-DQA1Q5Y7H0 FAM60DP-201ENST00000524174 632 ntBASIC4.85□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.85□□□□□ -1.63
HLA-DQA1Q5Y7H0 APOOP3-201ENST00000536787 586 ntBASIC4.85□□□□□ -1.63
HLA-DQA1Q5Y7H0 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.85□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC090022.1-201ENST00000546569 311 ntBASIC4.85□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.85□□□□□ -1.63
HLA-DQA1Q5Y7H0 AL022394.1-201ENST00000606979 292 ntBASIC4.85□□□□□ -1.63
HLA-DQA1Q5Y7H0 AL121612.2-201ENST00000612261 482 ntBASIC4.85□□□□□ -1.63
HLA-DQA1Q5Y7H0 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.85□□□□□ -1.63
HLA-DQA1Q5Y7H0 U6.114-201ENST00000636407 96 ntBASIC4.85□□□□□ -1.63
HLA-DQA1Q5Y7H0 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DQA1Q5Y7H0 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DQA1Q5Y7H0 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DQA1Q5Y7H0 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.85□□□□□ -1.63
HLA-DQA1Q5Y7H0 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
HLA-DQA1Q5Y7H0 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 SNORA17.1-201ENST00000362945 126 ntBASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 Y_RNA.167-201ENST00000363735 109 ntBASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 RNU6-188P-201ENST00000364207 107 ntBASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 RNU6-308P-201ENST00000390957 107 ntBASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 U3.29-201ENST00000391296 212 ntBASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 DUTP5-201ENST00000406790 469 ntBASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 MIR548K-201ENST00000408406 116 ntBASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 AL590609.2-201ENST00000421430 368 ntBASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 AL354766.1-201ENST00000423396 542 ntBASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 BRWD1P3-201ENST00000428816 390 ntBASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 CEACAMP1-201ENST00000434624 1035 ntBASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 RPL23AP43-201ENST00000446445 471 ntBASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 RNU6-1208P-201ENST00000459588 107 ntBASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC009127.1-201ENST00000467090 155 ntBASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 CCDC34P1-201ENST00000507441 517 ntBASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC017037.2-201ENST00000513850 890 ntBASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 IGLVIV-53-201ENST00000520107 367 ntBASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC127381.1-201ENST00000555979 939 ntBASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 BNIP3P25-201ENST00000596023 559 ntBASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 DPPA3P3-201ENST00000603842 430 ntBASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC011626.1-201ENST00000604710 562 ntBASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC106900.2-201ENST00000604994 317 ntBASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 AL390240.1-201ENST00000612950 384 ntBASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 AC091925.2-201ENST00000625059 256 ntBASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
HLA-DQA1Q5Y7H0 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
HLA-DQA1Q5Y7H0 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC011978.2-201ENST00000569835 2054 ntBASIC4.84□□□□□ -1.64
HLA-DQA1Q5Y7H0 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.64
HLA-DQA1Q5Y7H0 NXPH1-205ENST00000602349 1953 ntBASIC4.84□□□□□ -1.64
HLA-DQA1Q5Y7H0 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC026523.2-201ENST00000625039 7739 ntBASIC4.83□□□□□ -1.64
HLA-DQA1Q5Y7H0 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DQA1Q5Y7H0 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DQA1Q5Y7H0 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.83□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC007823.1-201ENST00000569932 1566 ntBASIC4.83□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.83□□□□□ -1.64
HLA-DQA1Q5Y7H0 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.83□□□□□ -1.64
HLA-DQA1Q5Y7H0 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DQA1Q5Y7H0 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
HLA-DQA1Q5Y7H0 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms