Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 AL161637.1-201ENST00000622380 412 ntBASIC6□□□□□ -1.45
USPL1Q5W0Q7 AL356585.4-201ENST00000623078 1229 ntBASIC6□□□□□ -1.45
USPL1Q5W0Q7 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC6□□□□□ -1.45
USPL1Q5W0Q7 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC6□□□□□ -1.45
USPL1Q5W0Q7 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6□□□□□ -1.45
USPL1Q5W0Q7 AC108467.2-201ENST00000617640 1597 ntBASIC6□□□□□ -1.45
USPL1Q5W0Q7 AC100778.3-201ENST00000580060 1750 ntBASIC6□□□□□ -1.45
USPL1Q5W0Q7 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
USPL1Q5W0Q7 AC011978.2-201ENST00000569835 2054 ntBASIC6□□□□□ -1.45
USPL1Q5W0Q7 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC6□□□□□ -1.45
USPL1Q5W0Q7 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6□□□□□ -1.45
USPL1Q5W0Q7 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
USPL1Q5W0Q7 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
USPL1Q5W0Q7 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
USPL1Q5W0Q7 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.99□□□□□ -1.45
USPL1Q5W0Q7 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
USPL1Q5W0Q7 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
USPL1Q5W0Q7 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
USPL1Q5W0Q7 RPL7P26-201ENST00000333817 754 ntBASIC5.99□□□□□ -1.45
USPL1Q5W0Q7 Y_RNA.255-201ENST00000364581 97 ntBASIC5.99□□□□□ -1.45
USPL1Q5W0Q7 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
USPL1Q5W0Q7 RN7SKP267-201ENST00000410381 285 ntBASIC5.99□□□□□ -1.45
USPL1Q5W0Q7 MTCYBP6-201ENST00000441810 138 ntBASIC5.99□□□□□ -1.45
USPL1Q5W0Q7 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
USPL1Q5W0Q7 AC104651.2-201ENST00000447549 528 ntBASIC5.99□□□□□ -1.45
USPL1Q5W0Q7 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
USPL1Q5W0Q7 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC5.99□□□□□ -1.45
USPL1Q5W0Q7 RPL23AP24-201ENST00000458203 385 ntBASIC5.99□□□□□ -1.45
USPL1Q5W0Q7 RNU7-30P-201ENST00000516835 62 ntBASIC5.99□□□□□ -1.45
USPL1Q5W0Q7 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.99□□□□□ -1.45
USPL1Q5W0Q7 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC5.99□□□□□ -1.45
USPL1Q5W0Q7 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.99□□□□□ -1.45
USPL1Q5W0Q7 AL121821.2-201ENST00000556081 394 ntBASIC5.99□□□□□ -1.45
USPL1Q5W0Q7 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC5.99□□□□□ -1.45
USPL1Q5W0Q7 AC007224.1-201ENST00000564410 144 ntBASIC5.99□□□□□ -1.45
USPL1Q5W0Q7 AL355375.2-201ENST00000574825 175 ntBASIC5.99□□□□□ -1.45
USPL1Q5W0Q7 MIR3146-201ENST00000580367 79 ntBASIC5.99□□□□□ -1.45
USPL1Q5W0Q7 Z84480.1-201ENST00000605131 311 ntBASIC5.99□□□□□ -1.45
USPL1Q5W0Q7 AL162730.1-201ENST00000605734 292 ntBASIC5.99□□□□□ -1.45
USPL1Q5W0Q7 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC5.99□□□□□ -1.45
USPL1Q5W0Q7 TPTEP1-208ENST00000636884 213 ntBASIC5.99□□□□□ -1.45
USPL1Q5W0Q7 MIR1302-1-201ENST00000637932 143 ntBASIC5.99□□□□□ -1.45
USPL1Q5W0Q7 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
USPL1Q5W0Q7 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.99□□□□□ -1.45
USPL1Q5W0Q7 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
USPL1Q5W0Q7 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
USPL1Q5W0Q7 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.99□□□□□ -1.45
USPL1Q5W0Q7 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
USPL1Q5W0Q7 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC5.98□□□□□ -1.45
USPL1Q5W0Q7 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
USPL1Q5W0Q7 AC006020.1-201ENST00000420179 1854 ntBASIC5.98□□□□□ -1.45
USPL1Q5W0Q7 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
USPL1Q5W0Q7 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.98□□□□□ -1.45
USPL1Q5W0Q7 AC063976.2-201ENST00000425667 3556 ntBASIC5.98□□□□□ -1.45
USPL1Q5W0Q7 NACAP2-201ENST00000318548 624 ntBASIC5.98□□□□□ -1.45
USPL1Q5W0Q7 SNORA37-201ENST00000384504 129 ntBASIC5.98□□□□□ -1.45
USPL1Q5W0Q7 AL122016.1-201ENST00000403365 367 ntBASIC5.98□□□□□ -1.45
USPL1Q5W0Q7 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC5.98□□□□□ -1.45
USPL1Q5W0Q7 RNU2-9P-201ENST00000410194 145 ntBASIC5.98□□□□□ -1.45
USPL1Q5W0Q7 RPL31P45-201ENST00000419532 356 ntBASIC5.98□□□□□ -1.45
USPL1Q5W0Q7 AC012065.2-201ENST00000421295 375 ntBASIC5.98□□□□□ -1.45
USPL1Q5W0Q7 MTCO2P12-201ENST00000427426 682 ntBASIC5.98□□□□□ -1.45
USPL1Q5W0Q7 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.98□□□□□ -1.45
USPL1Q5W0Q7 AL590233.1-201ENST00000430017 456 ntBASIC5.98□□□□□ -1.45
USPL1Q5W0Q7 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC5.98□□□□□ -1.45
USPL1Q5W0Q7 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
USPL1Q5W0Q7 AC114495.1-201ENST00000441274 436 ntBASIC5.98□□□□□ -1.45
USPL1Q5W0Q7 AC233279.1-201ENST00000455300 423 ntBASIC5.98□□□□□ -1.45
USPL1Q5W0Q7 CYCSP34-201ENST00000458172 304 ntBASIC5.98□□□□□ -1.45
USPL1Q5W0Q7 snoU13.8-201ENST00000458890 104 ntBASIC5.98□□□□□ -1.45
USPL1Q5W0Q7 SLC25A15P5-201ENST00000508033 253 ntBASIC5.98□□□□□ -1.45
USPL1Q5W0Q7 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC5.98□□□□□ -1.45
USPL1Q5W0Q7 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.98□□□□□ -1.45
USPL1Q5W0Q7 OR5BN1P-201ENST00000532955 829 ntBASIC5.98□□□□□ -1.45
USPL1Q5W0Q7 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
USPL1Q5W0Q7 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC5.98□□□□□ -1.45
USPL1Q5W0Q7 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC5.98□□□□□ -1.45
USPL1Q5W0Q7 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC5.98□□□□□ -1.45
USPL1Q5W0Q7 AC068790.3-201ENST00000602988 553 ntBASIC5.98□□□□□ -1.45
USPL1Q5W0Q7 AP001836.1-201ENST00000604675 523 ntBASIC5.98□□□□□ -1.45
USPL1Q5W0Q7 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC5.98□□□□□ -1.45
USPL1Q5W0Q7 AL596245.1-201ENST00000618994 362 ntBASIC5.98□□□□□ -1.45
USPL1Q5W0Q7 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC5.98□□□□□ -1.45
USPL1Q5W0Q7 AC009248.2-201ENST00000619826 254 ntBASIC5.98□□□□□ -1.45
USPL1Q5W0Q7 AC079597.1-201ENST00000624306 508 ntBASIC5.98□□□□□ -1.45
USPL1Q5W0Q7 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC5.98□□□□□ -1.45
USPL1Q5W0Q7 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC5.98□□□□□ -1.45
USPL1Q5W0Q7 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.98□□□□□ -1.45
USPL1Q5W0Q7 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.98□□□□□ -1.45
USPL1Q5W0Q7 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
USPL1Q5W0Q7 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
USPL1Q5W0Q7 RIOK3P1-201ENST00000418778 1528 ntBASIC5.98□□□□□ -1.45
USPL1Q5W0Q7 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
USPL1Q5W0Q7 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
USPL1Q5W0Q7 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
USPL1Q5W0Q7 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.98□□□□□ -1.45
USPL1Q5W0Q7 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
USPL1Q5W0Q7 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
USPL1Q5W0Q7 AL731566.1-201ENST00000620490 1937 ntBASIC5.97□□□□□ -1.45
USPL1Q5W0Q7 AC104623.2-202ENST00000623477 4002 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms