Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.75□□□□□ -1.33
VARS2Q5ST30 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC6.75□□□□□ -1.33
VARS2Q5ST30 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.75□□□□□ -1.33
VARS2Q5ST30 AL513218.1-201ENST00000606527 391 ntBASIC6.75□□□□□ -1.33
VARS2Q5ST30 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
VARS2Q5ST30 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
VARS2Q5ST30 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
VARS2Q5ST30 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.75□□□□□ -1.33
VARS2Q5ST30 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.75□□□□□ -1.33
VARS2Q5ST30 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
VARS2Q5ST30 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
VARS2Q5ST30 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
VARS2Q5ST30 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
VARS2Q5ST30 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.74□□□□□ -1.33
VARS2Q5ST30 OFD1P17-201ENST00000437639 3018 ntBASIC6.74□□□□□ -1.33
VARS2Q5ST30 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
VARS2Q5ST30 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
VARS2Q5ST30 Y_RNA.116-201ENST00000363292 103 ntBASIC6.74□□□□□ -1.33
VARS2Q5ST30 RNU4-11P-201ENST00000365287 132 ntBASIC6.74□□□□□ -1.33
VARS2Q5ST30 Y_RNA.388-201ENST00000383919 113 ntBASIC6.74□□□□□ -1.33
VARS2Q5ST30 RNY4P29-201ENST00000410801 97 ntBASIC6.74□□□□□ -1.33
VARS2Q5ST30 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC6.74□□□□□ -1.33
VARS2Q5ST30 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC6.74□□□□□ -1.33
VARS2Q5ST30 AL138785.1-201ENST00000425821 331 ntBASIC6.74□□□□□ -1.33
VARS2Q5ST30 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.74□□□□□ -1.33
VARS2Q5ST30 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.74□□□□□ -1.33
VARS2Q5ST30 PTMAP6-201ENST00000439110 327 ntBASIC6.74□□□□□ -1.33
VARS2Q5ST30 AC074290.1-201ENST00000448883 135 ntBASIC6.74□□□□□ -1.33
VARS2Q5ST30 PPIAP3-201ENST00000450588 505 ntBASIC6.74□□□□□ -1.33
VARS2Q5ST30 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.74□□□□□ -1.33
VARS2Q5ST30 RN7SL326P-201ENST00000477493 296 ntBASIC6.74□□□□□ -1.33
VARS2Q5ST30 UBA52P7-201ENST00000486088 380 ntBASIC6.74□□□□□ -1.33
VARS2Q5ST30 AL160314.1-201ENST00000490836 438 ntBASIC6.74□□□□□ -1.33
VARS2Q5ST30 AL590705.4-201ENST00000532209 134 ntBASIC6.74□□□□□ -1.33
VARS2Q5ST30 AC133555.2-201ENST00000550213 292 ntBASIC6.74□□□□□ -1.33
VARS2Q5ST30 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC6.74□□□□□ -1.33
VARS2Q5ST30 MEG8-215ENST00000555354 469 ntTSL 3 BASIC6.74□□□□□ -1.33
VARS2Q5ST30 MIR5095-201ENST00000578844 88 ntBASIC6.74□□□□□ -1.33
VARS2Q5ST30 AL132640.3-201ENST00000630473 177 ntBASIC6.74□□□□□ -1.33
VARS2Q5ST30 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.74□□□□□ -1.33
VARS2Q5ST30 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
VARS2Q5ST30 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
VARS2Q5ST30 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
VARS2Q5ST30 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.74□□□□□ -1.33
VARS2Q5ST30 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.74□□□□□ -1.33
VARS2Q5ST30 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
VARS2Q5ST30 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC6.74□□□□□ -1.33
VARS2Q5ST30 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
VARS2Q5ST30 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
VARS2Q5ST30 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
VARS2Q5ST30 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
VARS2Q5ST30 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.73□□□□□ -1.33
VARS2Q5ST30 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.73□□□□□ -1.33
VARS2Q5ST30 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.73□□□□□ -1.33
VARS2Q5ST30 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
VARS2Q5ST30 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
VARS2Q5ST30 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
VARS2Q5ST30 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
VARS2Q5ST30 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.73□□□□□ -1.33
VARS2Q5ST30 Y_RNA.7-201ENST00000362352 102 ntBASIC6.73□□□□□ -1.33
VARS2Q5ST30 RNA5SP110-201ENST00000362638 115 ntBASIC6.73□□□□□ -1.33
VARS2Q5ST30 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC6.73□□□□□ -1.33
VARS2Q5ST30 Y_RNA.420-201ENST00000384043 110 ntBASIC6.73□□□□□ -1.33
VARS2Q5ST30 SNORA26.2-201ENST00000390922 122 ntBASIC6.73□□□□□ -1.33
VARS2Q5ST30 AL358453.1-201ENST00000422522 250 ntBASIC6.73□□□□□ -1.33
VARS2Q5ST30 AC024067.1-201ENST00000426199 223 ntBASIC6.73□□□□□ -1.33
VARS2Q5ST30 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.73□□□□□ -1.33
VARS2Q5ST30 AL451136.1-201ENST00000435399 325 ntBASIC6.73□□□□□ -1.33
VARS2Q5ST30 AC097463.1-201ENST00000447288 481 ntBASIC6.73□□□□□ -1.33
VARS2Q5ST30 AC068228.1-201ENST00000461723 211 ntBASIC6.73□□□□□ -1.33
VARS2Q5ST30 IGKV1OR2-1-201ENST00000514060 354 ntBASIC6.73□□□□□ -1.33
VARS2Q5ST30 RN7SKP179-201ENST00000516126 217 ntBASIC6.73□□□□□ -1.33
VARS2Q5ST30 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.73□□□□□ -1.33
VARS2Q5ST30 IGKV3D-25-201ENST00000519599 235 ntBASIC6.73□□□□□ -1.33
VARS2Q5ST30 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.73□□□□□ -1.33
VARS2Q5ST30 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.73□□□□□ -1.33
VARS2Q5ST30 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.73□□□□□ -1.33
VARS2Q5ST30 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.73□□□□□ -1.33
VARS2Q5ST30 IGKV1OR2-118-201ENST00000603238 347 ntBASIC6.73□□□□□ -1.33
VARS2Q5ST30 AL022394.1-201ENST00000606979 292 ntBASIC6.73□□□□□ -1.33
VARS2Q5ST30 AL590099.1-201ENST00000615276 138 ntBASIC6.73□□□□□ -1.33
VARS2Q5ST30 AC079776.5-201ENST00000641920 211 ntBASIC6.73□□□□□ -1.33
VARS2Q5ST30 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
VARS2Q5ST30 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
VARS2Q5ST30 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
VARS2Q5ST30 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
VARS2Q5ST30 AC009812.4-201ENST00000569134 1805 ntBASIC6.73□□□□□ -1.33
VARS2Q5ST30 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC6.73□□□□□ -1.33
VARS2Q5ST30 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
VARS2Q5ST30 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.73□□□□□ -1.33
VARS2Q5ST30 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
VARS2Q5ST30 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
VARS2Q5ST30 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.73□□□□□ -1.33
VARS2Q5ST30 CYP2G2P-201ENST00000594920 1485 ntBASIC6.73□□□□□ -1.33
VARS2Q5ST30 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
VARS2Q5ST30 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.72□□□□□ -1.33
VARS2Q5ST30 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.72□□□□□ -1.33
VARS2Q5ST30 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
VARS2Q5ST30 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
VARS2Q5ST30 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms