Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 Y_RNA.592-201ENST00000410274 109 ntBASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 AC017079.2-201ENST00000416102 485 ntBASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 RPS12P5-201ENST00000423449 371 ntBASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 CHEK2P5-201ENST00000423877 246 ntBASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 AC093414.1-201ENST00000434712 514 ntBASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 RPL23AP81-201ENST00000455252 467 ntBASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 RN7SL269P-201ENST00000467795 305 ntBASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 AL355032.1-201ENST00000472981 438 ntBASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 AC018437.1-201ENST00000492214 406 ntBASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 RNU6-64P-201ENST00000517119 105 ntBASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 NPIPB1P-202ENST00000588786 828 ntBASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 AC141002.1-201ENST00000607025 279 ntBASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 HSPD1P8-201ENST00000400121 1658 ntBASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 AC005618.1-201ENST00000606901 3148 ntBASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 HAUS6P2-201ENST00000433254 2404 ntBASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.52□□□□□ -1.53
RNFT1Q5M7Z0 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 AP001284.1-201ENST00000528393 2118 ntBASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 AL592148.3-201ENST00000608771 2646 ntBASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 XIAPP3-201ENST00000312918 795 ntBASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 Y_RNA.439-201ENST00000384119 94 ntBASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 RNU6-708P-201ENST00000384217 107 ntBASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 SNORA17A-201ENST00000391185 133 ntBASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 RPL35AP3-201ENST00000414680 288 ntBASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 AC007098.1-201ENST00000420122 367 ntBASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 RPL23AP38-201ENST00000423801 469 ntBASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 TPT1P13-201ENST00000449760 499 ntBASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 SNORD121B-201ENST00000458838 81 ntBASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 RNU7-138P-201ENST00000459479 64 ntBASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 AP000926.1-201ENST00000479573 241 ntBASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 SCARNA18.1-201ENST00000516330 83 ntBASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 AC010186.2-204ENST00000537668 439 ntBASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 AC027288.2-201ENST00000553028 243 ntBASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 AL161616.1-201ENST00000611867 286 ntBASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 AC127024.6-201ENST00000621598 424 ntBASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 SNORA17.5-201ENST00000630429 132 ntBASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 MIR4302-201ENST00000638058 60 ntBASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 AC023421.1-201ENST00000590535 1785 ntBASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms