Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.16□□□□□ -1.9
SMARCB1Q12824 GTF2IP12-201ENST00000456547 356 ntBASIC3.16□□□□□ -1.9
SMARCB1Q12824 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.16□□□□□ -1.9
SMARCB1Q12824 AC015724.1-201ENST00000478577 156 ntBASIC3.16□□□□□ -1.9
SMARCB1Q12824 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.16□□□□□ -1.9
SMARCB1Q12824 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.16□□□□□ -1.9
SMARCB1Q12824 AC005351.1-201ENST00000511152 786 ntBASIC3.16□□□□□ -1.9
SMARCB1Q12824 MTND1P36-201ENST00000522384 936 ntBASIC3.16□□□□□ -1.9
SMARCB1Q12824 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.16□□□□□ -1.9
SMARCB1Q12824 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.16□□□□□ -1.9
SMARCB1Q12824 MIR3690-201ENST00000580266 75 ntBASIC3.16□□□□□ -1.9
SMARCB1Q12824 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.16□□□□□ -1.9
SMARCB1Q12824 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.16□□□□□ -1.9
SMARCB1Q12824 AC008687.2-201ENST00000597865 520 ntBASIC3.16□□□□□ -1.9
SMARCB1Q12824 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.16□□□□□ -1.9
SMARCB1Q12824 YWHAQP7-201ENST00000603536 658 ntBASIC3.16□□□□□ -1.9
SMARCB1Q12824 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
SMARCB1Q12824 AC018926.3-201ENST00000618841 406 ntBASIC3.16□□□□□ -1.9
SMARCB1Q12824 NSRP1P1-201ENST00000444067 1693 ntBASIC3.16□□□□□ -1.9
SMARCB1Q12824 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SMARCB1Q12824 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
SMARCB1Q12824 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
SMARCB1Q12824 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
SMARCB1Q12824 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.15□□□□□ -1.9
SMARCB1Q12824 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SMARCB1Q12824 RNU6-1339P-201ENST00000363574 91 ntBASIC3.15□□□□□ -1.91
SMARCB1Q12824 SNORA80A-201ENST00000363922 136 ntBASIC3.15□□□□□ -1.91
SMARCB1Q12824 SNORA9.2-201ENST00000365361 133 ntBASIC3.15□□□□□ -1.91
SMARCB1Q12824 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.15□□□□□ -1.91
SMARCB1Q12824 RNU6-354P-201ENST00000383862 107 ntBASIC3.15□□□□□ -1.91
SMARCB1Q12824 RNU6-610P-201ENST00000384264 107 ntBASIC3.15□□□□□ -1.91
SMARCB1Q12824 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
SMARCB1Q12824 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.15□□□□□ -1.91
SMARCB1Q12824 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.15□□□□□ -1.91
SMARCB1Q12824 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.15□□□□□ -1.91
SMARCB1Q12824 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SMARCB1Q12824 OR2AS1P-201ENST00000427827 319 ntBASIC3.15□□□□□ -1.91
SMARCB1Q12824 AL139132.1-201ENST00000431587 344 ntBASIC3.15□□□□□ -1.91
SMARCB1Q12824 SETP8-201ENST00000435341 628 ntBASIC3.15□□□□□ -1.91
SMARCB1Q12824 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.15□□□□□ -1.91
SMARCB1Q12824 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.15□□□□□ -1.91
SMARCB1Q12824 TRIM60P18-201ENST00000441518 828 ntBASIC3.15□□□□□ -1.91
SMARCB1Q12824 RAB11AP1-201ENST00000442978 646 ntBASIC3.15□□□□□ -1.91
SMARCB1Q12824 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.15□□□□□ -1.91
SMARCB1Q12824 MTND1P33-201ENST00000446251 917 ntBASIC3.15□□□□□ -1.91
SMARCB1Q12824 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.15□□□□□ -1.91
SMARCB1Q12824 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.15□□□□□ -1.91
SMARCB1Q12824 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC3.15□□□□□ -1.91
SMARCB1Q12824 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.15□□□□□ -1.91
SMARCB1Q12824 AC112518.2-201ENST00000508565 425 ntBASIC3.15□□□□□ -1.91
SMARCB1Q12824 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.15□□□□□ -1.91
SMARCB1Q12824 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.15□□□□□ -1.91
SMARCB1Q12824 AP003717.3-201ENST00000544832 1180 ntBASIC3.15□□□□□ -1.91
SMARCB1Q12824 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.15□□□□□ -1.91
SMARCB1Q12824 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.15□□□□□ -1.91
SMARCB1Q12824 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.15□□□□□ -1.91
SMARCB1Q12824 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.15□□□□□ -1.91
SMARCB1Q12824 AL157394.1-201ENST00000562983 1224 ntBASIC3.15□□□□□ -1.91
SMARCB1Q12824 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.15□□□□□ -1.91
SMARCB1Q12824 MTND4LP25-201ENST00000570218 163 ntBASIC3.15□□□□□ -1.91
SMARCB1Q12824 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.15□□□□□ -1.91
SMARCB1Q12824 AC021851.1-201ENST00000608537 1082 ntBASIC3.15□□□□□ -1.91
SMARCB1Q12824 MIR7106-201ENST00000612419 65 ntBASIC3.15□□□□□ -1.91
SMARCB1Q12824 AC006386.2-201ENST00000624491 75 ntBASIC3.15□□□□□ -1.91
SMARCB1Q12824 AC012005.1-201ENST00000624575 75 ntBASIC3.15□□□□□ -1.91
SMARCB1Q12824 AL356118.1-201ENST00000635272 1078 ntBASIC3.15□□□□□ -1.91
SMARCB1Q12824 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.15□□□□□ -1.91
SMARCB1Q12824 MIR4496-201ENST00000635896 61 ntBASIC3.15□□□□□ -1.91
SMARCB1Q12824 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
SMARCB1Q12824 MTCO1P24-201ENST00000515438 1558 ntBASIC3.15□□□□□ -1.91
SMARCB1Q12824 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SMARCB1Q12824 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SMARCB1Q12824 AC092435.3-201ENST00000565538 3654 ntBASIC3.14□□□□□ -1.91
SMARCB1Q12824 AC016716.1-201ENST00000265882 708 ntBASIC3.14□□□□□ -1.91
SMARCB1Q12824 SNORD56.3-201ENST00000363507 71 ntBASIC3.14□□□□□ -1.91
SMARCB1Q12824 SNORA7.2-201ENST00000364446 145 ntBASIC3.14□□□□□ -1.91
SMARCB1Q12824 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SMARCB1Q12824 PRRC2CP1-201ENST00000404428 159 ntBASIC3.14□□□□□ -1.91
SMARCB1Q12824 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.14□□□□□ -1.91
SMARCB1Q12824 AL139281.1-201ENST00000422120 335 ntBASIC3.14□□□□□ -1.91
SMARCB1Q12824 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.14□□□□□ -1.91
SMARCB1Q12824 AC093151.1-201ENST00000427711 313 ntBASIC3.14□□□□□ -1.91
SMARCB1Q12824 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.14□□□□□ -1.91
SMARCB1Q12824 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC3.14□□□□□ -1.91
SMARCB1Q12824 CKS1BP5-201ENST00000434172 273 ntBASIC3.14□□□□□ -1.91
SMARCB1Q12824 HMGB1P48-201ENST00000446155 598 ntBASIC3.14□□□□□ -1.91
SMARCB1Q12824 GAPDHP27-201ENST00000447427 1020 ntBASIC3.14□□□□□ -1.91
SMARCB1Q12824 AC005002.1-201ENST00000447458 540 ntBASIC3.14□□□□□ -1.91
SMARCB1Q12824 AC008280.2-201ENST00000455473 307 ntBASIC3.14□□□□□ -1.91
SMARCB1Q12824 AP001486.1-201ENST00000463339 476 ntBASIC3.14□□□□□ -1.91
SMARCB1Q12824 AC008379.1-201ENST00000463655 464 ntBASIC3.14□□□□□ -1.91
SMARCB1Q12824 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SMARCB1Q12824 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.14□□□□□ -1.91
SMARCB1Q12824 AL049873.1-201ENST00000480540 376 ntBASIC3.14□□□□□ -1.91
SMARCB1Q12824 RPS27P23-201ENST00000487608 251 ntBASIC3.14□□□□□ -1.91
SMARCB1Q12824 RN7SL20P-201ENST00000488827 297 ntBASIC3.14□□□□□ -1.91
SMARCB1Q12824 RN7SKP277-201ENST00000516895 283 ntBASIC3.14□□□□□ -1.91
SMARCB1Q12824 OR5G4P-201ENST00000525251 760 ntBASIC3.14□□□□□ -1.91
SMARCB1Q12824 AL442163.2-201ENST00000553912 710 ntBASIC3.14□□□□□ -1.91
SMARCB1Q12824 BNIP3P4-201ENST00000604946 565 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms