Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
TFF3Q07654 SYT14P1-202ENST00000600441 1448 ntBASIC2.03□□□□□ -2.08
TFF3Q07654 AC004925.1-201ENST00000624256 2706 ntBASIC2.03□□□□□ -2.08
TFF3Q07654 AC011155.1-201ENST00000316512 456 ntBASIC2.03□□□□□ -2.08
TFF3Q07654 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
TFF3Q07654 AC009302.1-201ENST00000417147 390 ntBASIC2.03□□□□□ -2.08
TFF3Q07654 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC2.03□□□□□ -2.08
TFF3Q07654 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.03□□□□□ -2.08
TFF3Q07654 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.03□□□□□ -2.08
TFF3Q07654 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.03□□□□□ -2.08
TFF3Q07654 AC018634.1-201ENST00000437554 401 ntBASIC2.03□□□□□ -2.08
TFF3Q07654 RPL23AP20-201ENST00000447965 421 ntBASIC2.03□□□□□ -2.08
TFF3Q07654 IFNWP4-201ENST00000453148 294 ntBASIC2.03□□□□□ -2.08
TFF3Q07654 RPS26P21-201ENST00000475397 348 ntBASIC2.03□□□□□ -2.08
TFF3Q07654 AC006483.1-201ENST00000487308 313 ntBASIC2.03□□□□□ -2.08
TFF3Q07654 RN7SKP244-201ENST00000516513 307 ntBASIC2.03□□□□□ -2.08
TFF3Q07654 RNA5SP402-201ENST00000517148 110 ntBASIC2.03□□□□□ -2.08
TFF3Q07654 AP000867.2-201ENST00000532468 320 ntBASIC2.03□□□□□ -2.08
TFF3Q07654 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
TFF3Q07654 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC2.03□□□□□ -2.08
TFF3Q07654 AC025281.1-201ENST00000567026 265 ntBASIC2.03□□□□□ -2.08
TFF3Q07654 AC061975.8-201ENST00000587058 721 ntBASIC2.03□□□□□ -2.08
TFF3Q07654 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.03□□□□□ -2.08
TFF3Q07654 AC004696.1-201ENST00000614345 607 ntBASIC2.03□□□□□ -2.08
TFF3Q07654 CYP3A51P-201ENST00000633513 256 ntBASIC2.03□□□□□ -2.08
TFF3Q07654 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.03□□□□□ -2.08
TFF3Q07654 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.03□□□□□ -2.08
TFF3Q07654 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.03□□□□□ -2.08
TFF3Q07654 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.09
TFF3Q07654 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.03□□□□□ -2.09
TFF3Q07654 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC2.02□□□□□ -2.09
TFF3Q07654 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
TFF3Q07654 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
TFF3Q07654 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
TFF3Q07654 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.02□□□□□ -2.09
TFF3Q07654 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
TFF3Q07654 RNU6-304P-201ENST00000364855 107 ntBASIC2.02□□□□□ -2.09
TFF3Q07654 NEK4P1-201ENST00000433383 879 ntBASIC2.02□□□□□ -2.09
TFF3Q07654 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
TFF3Q07654 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.02□□□□□ -2.09
TFF3Q07654 VN1R17P-201ENST00000472048 1090 ntBASIC2.02□□□□□ -2.09
TFF3Q07654 ACTR6P1-201ENST00000514311 1104 ntBASIC2.02□□□□□ -2.09
TFF3Q07654 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.02□□□□□ -2.09
TFF3Q07654 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.02□□□□□ -2.09
TFF3Q07654 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC2.02□□□□□ -2.09
TFF3Q07654 CD24P2-201ENST00000565486 219 ntBASIC2.02□□□□□ -2.09
TFF3Q07654 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.02□□□□□ -2.09
TFF3Q07654 AC010680.4-201ENST00000605334 543 ntBASIC2.02□□□□□ -2.09
TFF3Q07654 MIR6873-201ENST00000622788 63 ntBASIC2.02□□□□□ -2.09
TFF3Q07654 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.02□□□□□ -2.09
TFF3Q07654 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
TFF3Q07654 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
TFF3Q07654 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
TFF3Q07654 Z82195.2-201ENST00000612348 18351 ntBASIC2.01□□□□□ -2.09
TFF3Q07654 RNU1-51P-201ENST00000365345 176 ntBASIC2.01□□□□□ -2.09
TFF3Q07654 MIR591-201ENST00000385290 95 ntBASIC2.01□□□□□ -2.09
TFF3Q07654 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.01□□□□□ -2.09
TFF3Q07654 SAR1AP2-201ENST00000392696 594 ntBASIC2.01□□□□□ -2.09
TFF3Q07654 HMGB1P13-201ENST00000406019 642 ntBASIC2.01□□□□□ -2.09
TFF3Q07654 AC013410.1-201ENST00000436223 1232 ntBASIC2.01□□□□□ -2.09
TFF3Q07654 HSPE1P28-201ENST00000443139 211 ntBASIC2.01□□□□□ -2.09
TFF3Q07654 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.01□□□□□ -2.09
TFF3Q07654 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.01□□□□□ -2.09
TFF3Q07654 AC104090.1-201ENST00000506341 1171 ntBASIC2.01□□□□□ -2.09
TFF3Q07654 MTND4P2-201ENST00000507767 1203 ntBASIC2.01□□□□□ -2.09
TFF3Q07654 AC107222.1-201ENST00000510899 637 ntBASIC2.01□□□□□ -2.09
TFF3Q07654 AC112673.1-201ENST00000513168 575 ntBASIC2.01□□□□□ -2.09
TFF3Q07654 HSPE1P18-201ENST00000517602 280 ntBASIC2.01□□□□□ -2.09
TFF3Q07654 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC2.01□□□□□ -2.09
TFF3Q07654 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.01□□□□□ -2.09
TFF3Q07654 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.01□□□□□ -2.09
TFF3Q07654 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.01□□□□□ -2.09
TFF3Q07654 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.01□□□□□ -2.09
TFF3Q07654 AL645944.1-201ENST00000603857 493 ntBASIC2.01□□□□□ -2.09
TFF3Q07654 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.01□□□□□ -2.09
TFF3Q07654 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC2.01□□□□□ -2.09
TFF3Q07654 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
TFF3Q07654 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2□□□□□ -2.09
TFF3Q07654 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
TFF3Q07654 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2□□□□□ -2.09
TFF3Q07654 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
TFF3Q07654 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2□□□□□ -2.09
TFF3Q07654 SNORA64-201ENST00000384674 134 ntBASIC2□□□□□ -2.09
TFF3Q07654 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2□□□□□ -2.09
TFF3Q07654 Z98742.2-201ENST00000431564 187 ntBASIC2□□□□□ -2.09
TFF3Q07654 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2□□□□□ -2.09
TFF3Q07654 NPM1P49-201ENST00000448027 714 ntBASIC2□□□□□ -2.09
TFF3Q07654 AC090543.1-201ENST00000492168 485 ntBASIC2□□□□□ -2.09
TFF3Q07654 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2□□□□□ -2.09
TFF3Q07654 AC090071.1-201ENST00000507713 644 ntBASIC2□□□□□ -2.09
TFF3Q07654 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2□□□□□ -2.09
TFF3Q07654 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2□□□□□ -2.09
TFF3Q07654 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2□□□□□ -2.09
TFF3Q07654 NRBF2P1-201ENST00000587407 859 ntBASIC2□□□□□ -2.09
TFF3Q07654 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2□□□□□ -2.09
TFF3Q07654 VN1R9P-201ENST00000614184 867 ntBASIC2□□□□□ -2.09
TFF3Q07654 AC110994.2-201ENST00000635481 492 ntBASIC2□□□□□ -2.09
TFF3Q07654 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2□□□□□ -2.09
TFF3Q07654 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2□□□□□ -2.09
TFF3Q07654 AC022031.1-201ENST00000585985 2593 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms