Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 BX510359.1-201ENST00000456973 237 ntBASIC2.95□□□□□ -1.94
HMGCS1Q01581 snoU13.22-201ENST00000459428 104 ntBASIC2.95□□□□□ -1.94
HMGCS1Q01581 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.95□□□□□ -1.94
HMGCS1Q01581 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.95□□□□□ -1.94
HMGCS1Q01581 MTCO3P35-201ENST00000485582 781 ntBASIC2.95□□□□□ -1.94
HMGCS1Q01581 AC091860.1-201ENST00000505723 432 ntBASIC2.95□□□□□ -1.94
HMGCS1Q01581 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
HMGCS1Q01581 AC119751.1-201ENST00000513357 765 ntBASIC2.95□□□□□ -1.94
HMGCS1Q01581 MTCO2P32-201ENST00000514865 403 ntBASIC2.95□□□□□ -1.94
HMGCS1Q01581 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.95□□□□□ -1.94
HMGCS1Q01581 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.95□□□□□ -1.94
HMGCS1Q01581 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.95□□□□□ -1.94
HMGCS1Q01581 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.95□□□□□ -1.94
HMGCS1Q01581 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.95□□□□□ -1.94
HMGCS1Q01581 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.95□□□□□ -1.94
HMGCS1Q01581 OR4T1P-201ENST00000554933 911 ntBASIC2.95□□□□□ -1.94
HMGCS1Q01581 ZNF971P-201ENST00000562068 1249 ntBASIC2.95□□□□□ -1.94
HMGCS1Q01581 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.95□□□□□ -1.94
HMGCS1Q01581 AC107954.1-201ENST00000565906 727 ntBASIC2.95□□□□□ -1.94
HMGCS1Q01581 AC008507.2-201ENST00000588402 1176 ntBASIC2.95□□□□□ -1.94
HMGCS1Q01581 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.95□□□□□ -1.94
HMGCS1Q01581 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.95□□□□□ -1.94
HMGCS1Q01581 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.95□□□□□ -1.94
HMGCS1Q01581 AC099785.1-201ENST00000605697 437 ntBASIC2.95□□□□□ -1.94
HMGCS1Q01581 AC011816.2-201ENST00000607089 556 ntBASIC2.95□□□□□ -1.94
HMGCS1Q01581 AL590282.1-201ENST00000610379 1136 ntBASIC2.95□□□□□ -1.94
HMGCS1Q01581 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.95□□□□□ -1.94
HMGCS1Q01581 AC099506.2-201ENST00000623074 221 ntBASIC2.95□□□□□ -1.94
HMGCS1Q01581 AC139713.2-210ENST00000641741 992 ntBASIC2.95□□□□□ -1.94
HMGCS1Q01581 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.95□□□□□ -1.94
HMGCS1Q01581 AC002546.1-201ENST00000588041 2504 ntBASIC2.95□□□□□ -1.94
HMGCS1Q01581 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.95□□□□□ -1.94
HMGCS1Q01581 AL359893.1-201ENST00000447628 1580 ntBASIC2.95□□□□□ -1.94
HMGCS1Q01581 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
HMGCS1Q01581 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.94□□□□□ -1.94
HMGCS1Q01581 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.94□□□□□ -1.94
HMGCS1Q01581 SGO1P1-201ENST00000603525 1447 ntBASIC2.94□□□□□ -1.94
HMGCS1Q01581 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.94□□□□□ -1.94
HMGCS1Q01581 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
HMGCS1Q01581 SNORA7.4-201ENST00000384249 137 ntBASIC2.94□□□□□ -1.94
HMGCS1Q01581 SNORD15B-201ENST00000384714 146 ntBASIC2.94□□□□□ -1.94
HMGCS1Q01581 MIR16-1-201ENST00000385271 89 ntBASIC2.94□□□□□ -1.94
HMGCS1Q01581 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
HMGCS1Q01581 RNU6-575P-201ENST00000411326 105 ntBASIC2.94□□□□□ -1.94
HMGCS1Q01581 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.94□□□□□ -1.94
HMGCS1Q01581 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.94□□□□□ -1.94
HMGCS1Q01581 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.94□□□□□ -1.94
HMGCS1Q01581 RPP40P1-201ENST00000426762 456 ntBASIC2.94□□□□□ -1.94
HMGCS1Q01581 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.94□□□□□ -1.94
HMGCS1Q01581 NECAP1P2-201ENST00000455668 727 ntBASIC2.94□□□□□ -1.94
HMGCS1Q01581 AC087879.1-201ENST00000474343 374 ntBASIC2.94□□□□□ -1.94
HMGCS1Q01581 AC109925.1-201ENST00000478069 331 ntBASIC2.94□□□□□ -1.94
HMGCS1Q01581 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.94□□□□□ -1.94
HMGCS1Q01581 HMGB1P22-201ENST00000505315 124 ntBASIC2.94□□□□□ -1.94
HMGCS1Q01581 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
HMGCS1Q01581 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.94□□□□□ -1.94
HMGCS1Q01581 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.94□□□□□ -1.94
HMGCS1Q01581 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
HMGCS1Q01581 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC2.94□□□□□ -1.94
HMGCS1Q01581 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.94□□□□□ -1.94
HMGCS1Q01581 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.94□□□□□ -1.94
HMGCS1Q01581 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.94□□□□□ -1.94
HMGCS1Q01581 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC2.94□□□□□ -1.94
HMGCS1Q01581 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.94□□□□□ -1.94
HMGCS1Q01581 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC2.94□□□□□ -1.94
HMGCS1Q01581 AL451074.6-201ENST00000608512 729 ntBASIC2.94□□□□□ -1.94
HMGCS1Q01581 AL512427.1-201ENST00000618593 349 ntBASIC2.94□□□□□ -1.94
HMGCS1Q01581 AC018692.3-201ENST00000623929 123 ntBASIC2.94□□□□□ -1.94
HMGCS1Q01581 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.94□□□□□ -1.94
HMGCS1Q01581 AC106858.1-201ENST00000637497 429 ntBASIC2.94□□□□□ -1.94
HMGCS1Q01581 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HMGCS1Q01581 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.94□□□□□ -1.94
HMGCS1Q01581 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
HMGCS1Q01581 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
HMGCS1Q01581 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
HMGCS1Q01581 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
HMGCS1Q01581 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
HMGCS1Q01581 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
HMGCS1Q01581 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
HMGCS1Q01581 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.93□□□□□ -1.94
HMGCS1Q01581 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
HMGCS1Q01581 AC073325.2-201ENST00000339545 159 ntBASIC2.93□□□□□ -1.94
HMGCS1Q01581 SNORA38.1-201ENST00000364172 131 ntBASIC2.93□□□□□ -1.94
HMGCS1Q01581 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.93□□□□□ -1.94
HMGCS1Q01581 RNU6-619P-201ENST00000365146 108 ntBASIC2.93□□□□□ -1.94
HMGCS1Q01581 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.93□□□□□ -1.94
HMGCS1Q01581 GSTA8P-201ENST00000404253 637 ntBASIC2.93□□□□□ -1.94
HMGCS1Q01581 TANK-206ENST00000406287 875 ntTSL 5 BASIC2.93□□□□□ -1.94
HMGCS1Q01581 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.93□□□□□ -1.94
HMGCS1Q01581 UBE2V1P9-201ENST00000414760 368 ntBASIC2.93□□□□□ -1.94
HMGCS1Q01581 AC008280.1-201ENST00000418851 412 ntBASIC2.93□□□□□ -1.94
HMGCS1Q01581 KRR1P1-201ENST00000419430 803 ntBASIC2.93□□□□□ -1.94
HMGCS1Q01581 SFR1P2-201ENST00000421841 730 ntBASIC2.93□□□□□ -1.94
HMGCS1Q01581 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.93□□□□□ -1.94
HMGCS1Q01581 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.93□□□□□ -1.94
HMGCS1Q01581 HIGD1AP11-201ENST00000438361 280 ntBASIC2.93□□□□□ -1.94
HMGCS1Q01581 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HMGCS1Q01581 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.93□□□□□ -1.94
HMGCS1Q01581 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.93□□□□□ -1.94
HMGCS1Q01581 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms