Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 AL139286.1-201ENST00000604465 483 ntBASIC5.09□□□□□ -1.59
HERVK_113P62684 AL353621.2-201ENST00000605340 133 ntBASIC5.09□□□□□ -1.59
HERVK_113P62684 ACTR3BP1-201ENST00000605584 1247 ntBASIC5.09□□□□□ -1.59
HERVK_113P62684 AC008536.2-201ENST00000607284 349 ntBASIC5.09□□□□□ -1.59
HERVK_113P62684 AL161734.1-201ENST00000609720 557 ntBASIC5.09□□□□□ -1.59
HERVK_113P62684 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
HERVK_113P62684 AL732618.1-201ENST00000623251 301 ntBASIC5.09□□□□□ -1.59
HERVK_113P62684 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
HERVK_113P62684 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HERVK_113P62684 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HERVK_113P62684 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
HERVK_113P62684 EOGT-210ENST00000615922 1931 ntBASIC5.09□□□□□ -1.6
HERVK_113P62684 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
HERVK_113P62684 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
HERVK_113P62684 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
HERVK_113P62684 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
HERVK_113P62684 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
HERVK_113P62684 CCT4P2-201ENST00000233836 1548 ntBASIC5.08□□□□□ -1.6
HERVK_113P62684 THUMPD3P1-201ENST00000506556 1480 ntBASIC5.08□□□□□ -1.6
HERVK_113P62684 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
HERVK_113P62684 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HERVK_113P62684 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
HERVK_113P62684 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.08□□□□□ -1.6
HERVK_113P62684 Y_RNA.295-201ENST00000364918 102 ntBASIC5.08□□□□□ -1.6
HERVK_113P62684 SNORA51.6-201ENST00000384151 125 ntBASIC5.08□□□□□ -1.6
HERVK_113P62684 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.08□□□□□ -1.6
HERVK_113P62684 MIR921-201ENST00000401133 56 ntBASIC5.08□□□□□ -1.6
HERVK_113P62684 EIF4A1P3-201ENST00000411521 244 ntBASIC5.08□□□□□ -1.6
HERVK_113P62684 RPS3AP9-201ENST00000417027 792 ntBASIC5.08□□□□□ -1.6
HERVK_113P62684 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC5.08□□□□□ -1.6
HERVK_113P62684 PIGFP2-201ENST00000421400 651 ntBASIC5.08□□□□□ -1.6
HERVK_113P62684 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.08□□□□□ -1.6
HERVK_113P62684 MTCO1P20-201ENST00000425366 358 ntBASIC5.08□□□□□ -1.6
HERVK_113P62684 RPL31P35-201ENST00000431058 377 ntBASIC5.08□□□□□ -1.6
HERVK_113P62684 TRIM60P3Y-201ENST00000432201 673 ntBASIC5.08□□□□□ -1.6
HERVK_113P62684 AC002486.1-201ENST00000435098 391 ntBASIC5.08□□□□□ -1.6
HERVK_113P62684 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC5.08□□□□□ -1.6
HERVK_113P62684 AC007182.2-201ENST00000489251 402 ntBASIC5.08□□□□□ -1.6
HERVK_113P62684 AC090453.1-201ENST00000495560 436 ntBASIC5.08□□□□□ -1.6
HERVK_113P62684 AC008628.2-201ENST00000502605 298 ntBASIC5.08□□□□□ -1.6
HERVK_113P62684 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC5.08□□□□□ -1.6
HERVK_113P62684 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC5.08□□□□□ -1.6
HERVK_113P62684 RNA5SP497-201ENST00000516081 97 ntBASIC5.08□□□□□ -1.6
HERVK_113P62684 Y_RNA.672-201ENST00000516289 104 ntBASIC5.08□□□□□ -1.6
HERVK_113P62684 RNU6-1003P-201ENST00000517099 105 ntBASIC5.08□□□□□ -1.6
HERVK_113P62684 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.08□□□□□ -1.6
HERVK_113P62684 AC022861.1-201ENST00000522981 663 ntBASIC5.08□□□□□ -1.6
HERVK_113P62684 MTND1P35-201ENST00000526739 508 ntBASIC5.08□□□□□ -1.6
HERVK_113P62684 AP003181.2-201ENST00000528941 181 ntBASIC5.08□□□□□ -1.6
HERVK_113P62684 AC109635.3-201ENST00000529536 185 ntBASIC5.08□□□□□ -1.6
HERVK_113P62684 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC5.08□□□□□ -1.6
HERVK_113P62684 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC5.08□□□□□ -1.6
HERVK_113P62684 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.08□□□□□ -1.6
HERVK_113P62684 MIR4504-201ENST00000577413 92 ntBASIC5.08□□□□□ -1.6
HERVK_113P62684 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC5.08□□□□□ -1.6
HERVK_113P62684 AC006130.2-201ENST00000586202 326 ntBASIC5.08□□□□□ -1.6
HERVK_113P62684 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.08□□□□□ -1.6
HERVK_113P62684 AC245014.2-201ENST00000603689 287 ntBASIC5.08□□□□□ -1.6
HERVK_113P62684 AC246785.4-201ENST00000605374 287 ntBASIC5.08□□□□□ -1.6
HERVK_113P62684 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC5.08□□□□□ -1.6
HERVK_113P62684 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HERVK_113P62684 AC107027.3-201ENST00000565095 3473 ntBASIC5.08□□□□□ -1.6
HERVK_113P62684 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
HERVK_113P62684 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.08□□□□□ -1.6
HERVK_113P62684 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HERVK_113P62684 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.07□□□□□ -1.6
HERVK_113P62684 AC139769.1-204ENST00000472297 1931 ntBASIC5.07□□□□□ -1.6
HERVK_113P62684 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HERVK_113P62684 AL354685.2-201ENST00000448218 1447 ntBASIC5.07□□□□□ -1.6
HERVK_113P62684 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC5.07□□□□□ -1.6
HERVK_113P62684 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.07□□□□□ -1.6
HERVK_113P62684 MTND4P12-201ENST00000498999 1377 ntBASIC5.07□□□□□ -1.6
HERVK_113P62684 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HERVK_113P62684 OR51H2P-202ENST00000641424 3046 ntBASIC5.07□□□□□ -1.6
HERVK_113P62684 RNA5SP283-201ENST00000365604 119 ntBASIC5.07□□□□□ -1.6
HERVK_113P62684 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.07□□□□□ -1.6
HERVK_113P62684 RPA3-203ENST00000401447 414 ntTSL 3 BASIC5.07□□□□□ -1.6
HERVK_113P62684 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC5.07□□□□□ -1.6
HERVK_113P62684 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC5.07□□□□□ -1.6
HERVK_113P62684 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HERVK_113P62684 AL031736.2-201ENST00000426573 787 ntBASIC5.07□□□□□ -1.6
HERVK_113P62684 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.07□□□□□ -1.6
HERVK_113P62684 AC114495.1-201ENST00000441274 436 ntBASIC5.07□□□□□ -1.6
HERVK_113P62684 Z95327.1-201ENST00000446082 482 ntBASIC5.07□□□□□ -1.6
HERVK_113P62684 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC5.07□□□□□ -1.6
HERVK_113P62684 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC5.07□□□□□ -1.6
HERVK_113P62684 PABPC1P3-201ENST00000469174 459 ntBASIC5.07□□□□□ -1.6
HERVK_113P62684 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
HERVK_113P62684 AP001025.2-201ENST00000490908 477 ntBASIC5.07□□□□□ -1.6
HERVK_113P62684 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.07□□□□□ -1.6
HERVK_113P62684 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HERVK_113P62684 AC025465.4-201ENST00000513422 638 ntBASIC5.07□□□□□ -1.6
HERVK_113P62684 AC046134.1-201ENST00000514454 666 ntBASIC5.07□□□□□ -1.6
HERVK_113P62684 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.07□□□□□ -1.6
HERVK_113P62684 RNA5SP446-201ENST00000515955 82 ntBASIC5.07□□□□□ -1.6
HERVK_113P62684 RNA5SP49-201ENST00000516450 115 ntBASIC5.07□□□□□ -1.6
HERVK_113P62684 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC5.07□□□□□ -1.6
HERVK_113P62684 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC5.07□□□□□ -1.6
HERVK_113P62684 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.07□□□□□ -1.6
HERVK_113P62684 AL512360.1-201ENST00000555346 234 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms