Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
VSX2P58304 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
VSX2P58304 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.94□□□□□ -1.94
VSX2P58304 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.94□□□□□ -1.94
VSX2P58304 MTND5P24-201ENST00000438892 1767 ntBASIC2.94□□□□□ -1.94
VSX2P58304 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
VSX2P58304 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
VSX2P58304 MTCO1P4-201ENST00000520516 1409 ntBASIC2.93□□□□□ -1.94
VSX2P58304 API5P2-201ENST00000397055 1498 ntBASIC2.93□□□□□ -1.94
VSX2P58304 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.93□□□□□ -1.94
VSX2P58304 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
VSX2P58304 MIR22-201ENST00000362190 85 ntBASIC2.93□□□□□ -1.94
VSX2P58304 RNU6-353P-201ENST00000364266 108 ntBASIC2.93□□□□□ -1.94
VSX2P58304 U3.11-201ENST00000364476 212 ntBASIC2.93□□□□□ -1.94
VSX2P58304 SNORA71.1-201ENST00000364523 117 ntBASIC2.93□□□□□ -1.94
VSX2P58304 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.93□□□□□ -1.94
VSX2P58304 SAR1AP2-201ENST00000392696 594 ntBASIC2.93□□□□□ -1.94
VSX2P58304 RPL22P22-201ENST00000395439 379 ntBASIC2.93□□□□□ -1.94
VSX2P58304 RPL21P3-201ENST00000395517 478 ntBASIC2.93□□□□□ -1.94
VSX2P58304 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
VSX2P58304 SFR1P1-201ENST00000403720 688 ntBASIC2.93□□□□□ -1.94
VSX2P58304 RPL7P25-201ENST00000404151 721 ntBASIC2.93□□□□□ -1.94
VSX2P58304 AL138880.1-201ENST00000405824 642 ntBASIC2.93□□□□□ -1.94
VSX2P58304 AC019070.1-201ENST00000415008 1024 ntBASIC2.93□□□□□ -1.94
VSX2P58304 EI24P1-201ENST00000416584 867 ntBASIC2.93□□□□□ -1.94
VSX2P58304 RPS3AP9-201ENST00000417027 792 ntBASIC2.93□□□□□ -1.94
VSX2P58304 DEFB130D-201ENST00000426866 237 ntBASIC2.93□□□□□ -1.94
VSX2P58304 UBE2D3P3-201ENST00000426992 425 ntBASIC2.93□□□□□ -1.94
VSX2P58304 OR2B8P-201ENST00000432841 938 ntBASIC2.93□□□□□ -1.94
VSX2P58304 RPL21P112-201ENST00000434403 463 ntBASIC2.93□□□□□ -1.94
VSX2P58304 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC2.93□□□□□ -1.94
VSX2P58304 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.93□□□□□ -1.94
VSX2P58304 NF1P3-201ENST00000457709 450 ntBASIC2.93□□□□□ -1.94
VSX2P58304 AC146507.2-201ENST00000460608 476 ntBASIC2.93□□□□□ -1.94
VSX2P58304 NAP1L1P3-201ENST00000462291 880 ntBASIC2.93□□□□□ -1.94
VSX2P58304 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
VSX2P58304 ST13P14-201ENST00000474095 734 ntBASIC2.93□□□□□ -1.94
VSX2P58304 AC093278.1-201ENST00000494700 600 ntBASIC2.93□□□□□ -1.94
VSX2P58304 AC109471.1-201ENST00000511631 612 ntBASIC2.93□□□□□ -1.94
VSX2P58304 PSMA2P1-201ENST00000526365 646 ntBASIC2.93□□□□□ -1.94
VSX2P58304 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.93□□□□□ -1.94
VSX2P58304 AP002404.1-201ENST00000532005 451 ntBASIC2.93□□□□□ -1.94
VSX2P58304 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.93□□□□□ -1.94
VSX2P58304 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC2.93□□□□□ -1.94
VSX2P58304 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
VSX2P58304 AC107954.1-201ENST00000565906 727 ntBASIC2.93□□□□□ -1.94
VSX2P58304 MTCO1P40-201ENST00000574371 625 ntBASIC2.93□□□□□ -1.94
VSX2P58304 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.93□□□□□ -1.94
VSX2P58304 AC013468.1-201ENST00000608680 598 ntBASIC2.93□□□□□ -1.94
VSX2P58304 AC135507.2-201ENST00000612443 309 ntBASIC2.93□□□□□ -1.94
VSX2P58304 ATP5A1P2-202ENST00000616464 443 ntBASIC2.93□□□□□ -1.94
VSX2P58304 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.93□□□□□ -1.94
VSX2P58304 AC008264.2-201ENST00000610193 3731 ntBASIC2.93□□□□□ -1.94
VSX2P58304 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.93□□□□□ -1.94
VSX2P58304 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
VSX2P58304 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
VSX2P58304 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.92□□□□□ -1.94
VSX2P58304 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
VSX2P58304 ZNF849P-201ENST00000594711 1566 ntBASIC2.92□□□□□ -1.94
VSX2P58304 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
VSX2P58304 RNU6-600P-201ENST00000362524 99 ntBASIC2.92□□□□□ -1.94
VSX2P58304 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
VSX2P58304 OR1L1-202ENST00000373686 1083 ntBASIC2.92□□□□□ -1.94
VSX2P58304 RNU6-444P-201ENST00000383988 108 ntBASIC2.92□□□□□ -1.94
VSX2P58304 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.92□□□□□ -1.94
VSX2P58304 OR51A3P-201ENST00000413596 924 ntBASIC2.92□□□□□ -1.94
VSX2P58304 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.92□□□□□ -1.94
VSX2P58304 OFD1P18Y-201ENST00000420889 959 ntBASIC2.92□□□□□ -1.94
VSX2P58304 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.92□□□□□ -1.94
VSX2P58304 RPL7P44-201ENST00000424827 742 ntBASIC2.92□□□□□ -1.94
VSX2P58304 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.92□□□□□ -1.94
VSX2P58304 RPL31P54-201ENST00000429803 370 ntBASIC2.92□□□□□ -1.94
VSX2P58304 RPS26P56-201ENST00000444468 240 ntBASIC2.92□□□□□ -1.94
VSX2P58304 AL096829.2-201ENST00000446582 742 ntBASIC2.92□□□□□ -1.94
VSX2P58304 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.92□□□□□ -1.94
VSX2P58304 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.92□□□□□ -1.94
VSX2P58304 RPL21P8-201ENST00000465083 535 ntBASIC2.92□□□□□ -1.94
VSX2P58304 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.92□□□□□ -1.94
VSX2P58304 RPL7P23-201ENST00000493874 747 ntBASIC2.92□□□□□ -1.94
VSX2P58304 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
VSX2P58304 AC112518.2-201ENST00000508565 425 ntBASIC2.92□□□□□ -1.94
VSX2P58304 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.92□□□□□ -1.94
VSX2P58304 AC104057.1-201ENST00000515547 497 ntBASIC2.92□□□□□ -1.94
VSX2P58304 RNU6-334P-201ENST00000517072 102 ntBASIC2.92□□□□□ -1.94
VSX2P58304 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.92□□□□□ -1.94
VSX2P58304 AP000889.1-201ENST00000530968 660 ntBASIC2.92□□□□□ -1.94
VSX2P58304 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.92□□□□□ -1.94
VSX2P58304 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.92□□□□□ -1.94
VSX2P58304 AC011611.5-201ENST00000552477 578 ntBASIC2.92□□□□□ -1.94
VSX2P58304 AL121603.1-201ENST00000553815 142 ntBASIC2.92□□□□□ -1.94
VSX2P58304 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.92□□□□□ -1.94
VSX2P58304 AC090616.5-202ENST00000582111 297 ntBASIC2.92□□□□□ -1.94
VSX2P58304 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.92□□□□□ -1.94
VSX2P58304 SNORD39.3-201ENST00000584451 71 ntBASIC2.92□□□□□ -1.94
VSX2P58304 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.92□□□□□ -1.94
VSX2P58304 AC092474.3-201ENST00000603022 568 ntBASIC2.92□□□□□ -1.94
VSX2P58304 AL162574.2-201ENST00000614618 657 ntBASIC2.92□□□□□ -1.94
VSX2P58304 AC097372.4-201ENST00000625025 466 ntBASIC2.92□□□□□ -1.94
VSX2P58304 AL590396.4-201ENST00000636779 956 ntBASIC2.92□□□□□ -1.94
VSX2P58304 AC073055.1-201ENST00000456901 1621 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms