Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC011939.3-201ENST00000613686 466 ntBASIC3.7□□□□□ -1.82
CLDN20P56880 MIR7702-201ENST00000621931 59 ntBASIC3.7□□□□□ -1.82
CLDN20P56880 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.7□□□□□ -1.82
CLDN20P56880 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.7□□□□□ -1.82
CLDN20P56880 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLDN20P56880 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CLDN20P56880 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.7□□□□□ -1.82
CLDN20P56880 RPS4XP5-202ENST00000449995 1334 ntBASIC3.7□□□□□ -1.82
CLDN20P56880 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.69□□□□□ -1.82
CLDN20P56880 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.69□□□□□ -1.82
CLDN20P56880 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CLDN20P56880 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.69□□□□□ -1.82
CLDN20P56880 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
CLDN20P56880 FAM91A3P-201ENST00000456826 2544 ntBASIC3.69□□□□□ -1.82
CLDN20P56880 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.69□□□□□ -1.82
CLDN20P56880 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
CLDN20P56880 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.69□□□□□ -1.82
CLDN20P56880 RNU6-761P-201ENST00000384148 107 ntBASIC3.69□□□□□ -1.82
CLDN20P56880 SNORA37-201ENST00000384504 129 ntBASIC3.69□□□□□ -1.82
CLDN20P56880 U3.29-201ENST00000391296 212 ntBASIC3.69□□□□□ -1.82
CLDN20P56880 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.69□□□□□ -1.82
CLDN20P56880 AL355379.1-201ENST00000405542 640 ntBASIC3.69□□□□□ -1.82
CLDN20P56880 RPL21P65-201ENST00000406094 466 ntBASIC3.69□□□□□ -1.82
CLDN20P56880 MIR1305-201ENST00000408300 86 ntBASIC3.69□□□□□ -1.82
CLDN20P56880 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.69□□□□□ -1.82
CLDN20P56880 HSPE1P12-201ENST00000412576 301 ntBASIC3.69□□□□□ -1.82
CLDN20P56880 MTCYBP24-201ENST00000420387 1106 ntBASIC3.69□□□□□ -1.82
CLDN20P56880 AL389915.1-201ENST00000422463 466 ntBASIC3.69□□□□□ -1.82
CLDN20P56880 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.69□□□□□ -1.82
CLDN20P56880 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.69□□□□□ -1.82
CLDN20P56880 AC087650.1-201ENST00000431445 468 ntBASIC3.69□□□□□ -1.82
CLDN20P56880 RPS6P12-201ENST00000432491 726 ntBASIC3.69□□□□□ -1.82
CLDN20P56880 CKS1BP5-201ENST00000434172 273 ntBASIC3.69□□□□□ -1.82
CLDN20P56880 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.69□□□□□ -1.82
CLDN20P56880 LSM1P1-201ENST00000438629 273 ntBASIC3.69□□□□□ -1.82
CLDN20P56880 TRIM60P18-201ENST00000441518 828 ntBASIC3.69□□□□□ -1.82
CLDN20P56880 TAF9P1-201ENST00000445421 515 ntBASIC3.69□□□□□ -1.82
CLDN20P56880 TAF9P2-201ENST00000454958 515 ntBASIC3.69□□□□□ -1.82
CLDN20P56880 RPL38P1-201ENST00000460914 211 ntBASIC3.69□□□□□ -1.82
CLDN20P56880 RN7SL93P-201ENST00000463035 293 ntBASIC3.69□□□□□ -1.82
CLDN20P56880 RPL31P61-201ENST00000496160 376 ntBASIC3.69□□□□□ -1.82
CLDN20P56880 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.69□□□□□ -1.82
CLDN20P56880 AC022447.3-201ENST00000506865 495 ntBASIC3.69□□□□□ -1.82
CLDN20P56880 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.69□□□□□ -1.82
CLDN20P56880 PTGES3P3-201ENST00000511479 482 ntBASIC3.69□□□□□ -1.82
CLDN20P56880 RN7SKP116-201ENST00000516902 319 ntBASIC3.69□□□□□ -1.82
CLDN20P56880 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.69□□□□□ -1.82
CLDN20P56880 AC060788.1-201ENST00000521318 469 ntBASIC3.69□□□□□ -1.82
CLDN20P56880 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.69□□□□□ -1.82
CLDN20P56880 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CLDN20P56880 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.69□□□□□ -1.82
CLDN20P56880 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.69□□□□□ -1.82
CLDN20P56880 AP003385.6-201ENST00000531603 374 ntBASIC3.69□□□□□ -1.82
CLDN20P56880 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.69□□□□□ -1.82
CLDN20P56880 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.69□□□□□ -1.82
CLDN20P56880 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.69□□□□□ -1.82
CLDN20P56880 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.69□□□□□ -1.82
CLDN20P56880 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.69□□□□□ -1.82
CLDN20P56880 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.69□□□□□ -1.82
CLDN20P56880 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.69□□□□□ -1.82
CLDN20P56880 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.69□□□□□ -1.82
CLDN20P56880 RPL23AP87-202ENST00000573039 466 ntBASIC3.69□□□□□ -1.82
CLDN20P56880 MIR3160-1-201ENST00000577972 85 ntBASIC3.69□□□□□ -1.82
CLDN20P56880 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.69□□□□□ -1.82
CLDN20P56880 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.69□□□□□ -1.82
CLDN20P56880 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.69□□□□□ -1.82
CLDN20P56880 BNIP3P23-201ENST00000599655 511 ntBASIC3.69□□□□□ -1.82
CLDN20P56880 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.69□□□□□ -1.82
CLDN20P56880 AC097468.3-201ENST00000607956 456 ntBASIC3.69□□□□□ -1.82
CLDN20P56880 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.69□□□□□ -1.82
CLDN20P56880 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CLDN20P56880 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
CLDN20P56880 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CLDN20P56880 NCAPGP1-201ENST00000505112 1814 ntBASIC3.69□□□□□ -1.82
CLDN20P56880 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CLDN20P56880 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CLDN20P56880 PABPC1P9-201ENST00000426076 1612 ntBASIC3.69□□□□□ -1.82
CLDN20P56880 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.68□□□□□ -1.82
CLDN20P56880 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CLDN20P56880 PNPT1P2-201ENST00000456768 2050 ntBASIC3.68□□□□□ -1.82
CLDN20P56880 RNU6-28P-201ENST00000362378 107 ntBASIC3.68□□□□□ -1.82
CLDN20P56880 Y_RNA.51-201ENST00000362725 102 ntBASIC3.68□□□□□ -1.82
CLDN20P56880 RNU1-18P-201ENST00000363062 164 ntBASIC3.68□□□□□ -1.82
CLDN20P56880 AC025750.1-201ENST00000399891 379 ntBASIC3.68□□□□□ -1.82
CLDN20P56880 MIR1193-201ENST00000408109 78 ntBASIC3.68□□□□□ -1.82
CLDN20P56880 RNU2-15P-201ENST00000410692 191 ntBASIC3.68□□□□□ -1.82
CLDN20P56880 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.68□□□□□ -1.82
CLDN20P56880 BTF3L4P1-201ENST00000413813 468 ntBASIC3.68□□□□□ -1.82
CLDN20P56880 RPS12P23-201ENST00000419579 400 ntBASIC3.68□□□□□ -1.82
CLDN20P56880 RPS27AP14-201ENST00000422868 454 ntBASIC3.68□□□□□ -1.82
CLDN20P56880 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.68□□□□□ -1.82
CLDN20P56880 AC007742.1-201ENST00000425789 329 ntBASIC3.68□□□□□ -1.82
CLDN20P56880 AC092017.2-201ENST00000427600 362 ntBASIC3.68□□□□□ -1.82
CLDN20P56880 AL117339.2-201ENST00000430475 180 ntBASIC3.68□□□□□ -1.82
CLDN20P56880 AL358472.1-201ENST00000431295 329 ntBASIC3.68□□□□□ -1.82
CLDN20P56880 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.68□□□□□ -1.82
CLDN20P56880 ELOCP26-201ENST00000436067 329 ntBASIC3.68□□□□□ -1.82
CLDN20P56880 SDCBPP1-201ENST00000440192 890 ntBASIC3.68□□□□□ -1.82
CLDN20P56880 RPS4XP4-201ENST00000443195 763 ntBASIC3.68□□□□□ -1.82
CLDN20P56880 HSFY6P-201ENST00000445573 403 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms