Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 RNA5SP230-201ENST00000517039 122 ntBASIC4.58□□□□□ -1.68
TM4SF4P48230 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.58□□□□□ -1.68
TM4SF4P48230 AL359219.2-201ENST00000555184 348 ntBASIC4.58□□□□□ -1.68
TM4SF4P48230 AC012417.1-201ENST00000582307 1039 ntBASIC4.58□□□□□ -1.68
TM4SF4P48230 AL353997.4-201ENST00000586196 166 ntBASIC4.58□□□□□ -1.68
TM4SF4P48230 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.58□□□□□ -1.68
TM4SF4P48230 HMGN2P28-201ENST00000606102 262 ntBASIC4.58□□□□□ -1.68
TM4SF4P48230 AC097468.3-201ENST00000607956 456 ntBASIC4.58□□□□□ -1.68
TM4SF4P48230 AC073114.1-201ENST00000612027 490 ntBASIC4.58□□□□□ -1.68
TM4SF4P48230 AC055839.1-201ENST00000634467 498 ntBASIC4.58□□□□□ -1.68
TM4SF4P48230 AC244258.1-201ENST00000637553 1071 ntBASIC4.58□□□□□ -1.68
TM4SF4P48230 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.58□□□□□ -1.68
TM4SF4P48230 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
TM4SF4P48230 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.58□□□□□ -1.68
TM4SF4P48230 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TM4SF4P48230 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.57□□□□□ -1.68
TM4SF4P48230 RNA5SP258-201ENST00000362750 119 ntBASIC4.57□□□□□ -1.68
TM4SF4P48230 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
TM4SF4P48230 MTCO3P12-201ENST00000416718 547 ntBASIC4.57□□□□□ -1.68
TM4SF4P48230 AC097713.2-201ENST00000430199 356 ntBASIC4.57□□□□□ -1.68
TM4SF4P48230 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.57□□□□□ -1.68
TM4SF4P48230 MTND2P4-201ENST00000445034 1004 ntBASIC4.57□□□□□ -1.68
TM4SF4P48230 KATNBL1P6-201ENST00000453433 915 ntBASIC4.57□□□□□ -1.68
TM4SF4P48230 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.57□□□□□ -1.68
TM4SF4P48230 HMGB3P30-201ENST00000457863 606 ntBASIC4.57□□□□□ -1.68
TM4SF4P48230 RPL30P9-201ENST00000465586 330 ntBASIC4.57□□□□□ -1.68
TM4SF4P48230 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TM4SF4P48230 AC108022.1-201ENST00000493466 478 ntBASIC4.57□□□□□ -1.68
TM4SF4P48230 AC117522.2-201ENST00000510049 657 ntBASIC4.57□□□□□ -1.68
TM4SF4P48230 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC4.57□□□□□ -1.68
TM4SF4P48230 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.57□□□□□ -1.68
TM4SF4P48230 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.57□□□□□ -1.68
TM4SF4P48230 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.57□□□□□ -1.68
TM4SF4P48230 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC4.57□□□□□ -1.68
TM4SF4P48230 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TM4SF4P48230 ACTR3BP3-201ENST00000565577 979 ntBASIC4.57□□□□□ -1.68
TM4SF4P48230 RPL23AP87-202ENST00000573039 466 ntBASIC4.57□□□□□ -1.68
TM4SF4P48230 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TM4SF4P48230 AL031176.1-201ENST00000604554 466 ntBASIC4.57□□□□□ -1.68
TM4SF4P48230 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.57□□□□□ -1.68
TM4SF4P48230 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.57□□□□□ -1.68
TM4SF4P48230 AP003399.1-201ENST00000637534 361 ntBASIC4.57□□□□□ -1.68
TM4SF4P48230 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
TM4SF4P48230 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
TM4SF4P48230 AC092447.10-201ENST00000620607 1652 ntBASIC4.57□□□□□ -1.68
TM4SF4P48230 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TM4SF4P48230 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
TM4SF4P48230 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TM4SF4P48230 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
TM4SF4P48230 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
TM4SF4P48230 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
TM4SF4P48230 RNU4-40P-201ENST00000364351 143 ntBASIC4.56□□□□□ -1.68
TM4SF4P48230 U8.14-201ENST00000390843 143 ntBASIC4.56□□□□□ -1.68
TM4SF4P48230 AL512649.1-201ENST00000428997 581 ntBASIC4.56□□□□□ -1.68
TM4SF4P48230 FTH1P6-201ENST00000430768 320 ntBASIC4.56□□□□□ -1.68
TM4SF4P48230 RPS27AP8-201ENST00000452665 445 ntBASIC4.56□□□□□ -1.68
TM4SF4P48230 OR6K1P-201ENST00000456766 971 ntBASIC4.56□□□□□ -1.68
TM4SF4P48230 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.56□□□□□ -1.68
TM4SF4P48230 RPL23AP65-201ENST00000475608 468 ntBASIC4.56□□□□□ -1.68
TM4SF4P48230 AC116337.2-201ENST00000477662 156 ntBASIC4.56□□□□□ -1.68
TM4SF4P48230 AP000926.1-201ENST00000479573 241 ntBASIC4.56□□□□□ -1.68
TM4SF4P48230 AL049873.1-201ENST00000480540 376 ntBASIC4.56□□□□□ -1.68
TM4SF4P48230 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.56□□□□□ -1.68
TM4SF4P48230 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.56□□□□□ -1.68
TM4SF4P48230 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.56□□□□□ -1.68
TM4SF4P48230 PHBP17-201ENST00000528576 541 ntBASIC4.56□□□□□ -1.68
TM4SF4P48230 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TM4SF4P48230 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.56□□□□□ -1.68
TM4SF4P48230 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.56□□□□□ -1.68
TM4SF4P48230 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.56□□□□□ -1.68
TM4SF4P48230 NBR2-204ENST00000587322 63 ntBASIC4.56□□□□□ -1.68
TM4SF4P48230 AC110760.3-201ENST00000598794 467 ntBASIC4.56□□□□□ -1.68
TM4SF4P48230 AC004853.1-201ENST00000604902 698 ntBASIC4.56□□□□□ -1.68
TM4SF4P48230 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.56□□□□□ -1.68
TM4SF4P48230 AP005264.7-201ENST00000625003 745 ntBASIC4.56□□□□□ -1.68
TM4SF4P48230 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.56□□□□□ -1.68
TM4SF4P48230 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.56□□□□□ -1.68
TM4SF4P48230 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.56□□□□□ -1.68
TM4SF4P48230 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
TM4SF4P48230 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.56□□□□□ -1.68
TM4SF4P48230 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.56□□□□□ -1.68
TM4SF4P48230 AC244517.1-201ENST00000606030 2086 ntBASIC4.56□□□□□ -1.68
TM4SF4P48230 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.56□□□□□ -1.68
TM4SF4P48230 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TM4SF4P48230 ZNF833P-201ENST00000424938 1494 ntBASIC4.56□□□□□ -1.68
TM4SF4P48230 AP002001.2-201ENST00000529025 1469 ntBASIC4.56□□□□□ -1.68
TM4SF4P48230 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TM4SF4P48230 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
TM4SF4P48230 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
TM4SF4P48230 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.55□□□□□ -1.68
TM4SF4P48230 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
TM4SF4P48230 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
TM4SF4P48230 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TM4SF4P48230 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TM4SF4P48230 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TM4SF4P48230 RNY4P24-201ENST00000362735 96 ntBASIC4.55□□□□□ -1.68
TM4SF4P48230 RNA5SP399-201ENST00000364003 117 ntBASIC4.55□□□□□ -1.68
TM4SF4P48230 RNU6-853P-201ENST00000364306 107 ntBASIC4.55□□□□□ -1.68
TM4SF4P48230 Y_RNA.234-201ENST00000364409 97 ntBASIC4.55□□□□□ -1.68
TM4SF4P48230 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms