Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 GAPDHP27-201ENST00000447427 1020 ntBASIC3.16□□□□□ -1.9
FDFT1P37268 AL050341.1-201ENST00000447743 313 ntBASIC3.16□□□□□ -1.9
FDFT1P37268 AC104308.1-201ENST00000454621 333 ntBASIC3.16□□□□□ -1.9
FDFT1P37268 TRBV26-201ENST00000456572 344 ntBASIC3.16□□□□□ -1.9
FDFT1P37268 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.16□□□□□ -1.9
FDFT1P37268 RN7SL863P-201ENST00000462370 296 ntBASIC3.16□□□□□ -1.9
FDFT1P37268 AC010301.1-201ENST00000473936 355 ntBASIC3.16□□□□□ -1.9
FDFT1P37268 AC108860.1-201ENST00000484521 383 ntBASIC3.16□□□□□ -1.9
FDFT1P37268 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.16□□□□□ -1.9
FDFT1P37268 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.16□□□□□ -1.9
FDFT1P37268 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.16□□□□□ -1.9
FDFT1P37268 AC109471.1-201ENST00000511631 612 ntBASIC3.16□□□□□ -1.9
FDFT1P37268 SNORA67.7-201ENST00000516664 135 ntBASIC3.16□□□□□ -1.9
FDFT1P37268 DUXAP2-201ENST00000519198 589 ntBASIC3.16□□□□□ -1.9
FDFT1P37268 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.16□□□□□ -1.9
FDFT1P37268 AP001029.3-201ENST00000588063 596 ntBASIC3.16□□□□□ -1.9
FDFT1P37268 AC100793.4-201ENST00000613683 429 ntBASIC3.16□□□□□ -1.9
FDFT1P37268 AC006133.1-201ENST00000617106 264 ntBASIC3.16□□□□□ -1.9
FDFT1P37268 MIR622-201ENST00000638396 96 ntBASIC3.16□□□□□ -1.9
FDFT1P37268 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
FDFT1P37268 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.15□□□□□ -1.9
FDFT1P37268 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.15□□□□□ -1.9
FDFT1P37268 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
FDFT1P37268 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.15□□□□□ -1.9
FDFT1P37268 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
FDFT1P37268 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
FDFT1P37268 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
FDFT1P37268 RNU6-353P-201ENST00000364266 108 ntBASIC3.15□□□□□ -1.91
FDFT1P37268 OR1L1-202ENST00000373686 1083 ntBASIC3.15□□□□□ -1.91
FDFT1P37268 MIR183-201ENST00000384958 110 ntBASIC3.15□□□□□ -1.91
FDFT1P37268 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
FDFT1P37268 RPL22P22-201ENST00000395439 379 ntBASIC3.15□□□□□ -1.91
FDFT1P37268 GSTA8P-201ENST00000404253 637 ntBASIC3.15□□□□□ -1.91
FDFT1P37268 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.15□□□□□ -1.91
FDFT1P37268 RPL21P32-201ENST00000419877 477 ntBASIC3.15□□□□□ -1.91
FDFT1P37268 AC233728.2-201ENST00000425348 757 ntBASIC3.15□□□□□ -1.91
FDFT1P37268 DUTP6-201ENST00000425573 462 ntBASIC3.15□□□□□ -1.91
FDFT1P37268 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.15□□□□□ -1.91
FDFT1P37268 Z95327.1-201ENST00000446082 482 ntBASIC3.15□□□□□ -1.91
FDFT1P37268 AL096829.2-201ENST00000446582 742 ntBASIC3.15□□□□□ -1.91
FDFT1P37268 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.15□□□□□ -1.91
FDFT1P37268 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.15□□□□□ -1.91
FDFT1P37268 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.15□□□□□ -1.91
FDFT1P37268 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.15□□□□□ -1.91
FDFT1P37268 VPS26AP1-201ENST00000483197 979 ntBASIC3.15□□□□□ -1.91
FDFT1P37268 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.15□□□□□ -1.91
FDFT1P37268 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.15□□□□□ -1.91
FDFT1P37268 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
FDFT1P37268 RN7SKP43-201ENST00000516173 320 ntBASIC3.15□□□□□ -1.91
FDFT1P37268 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.15□□□□□ -1.91
FDFT1P37268 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.15□□□□□ -1.91
FDFT1P37268 AC019227.1-201ENST00000526902 510 ntBASIC3.15□□□□□ -1.91
FDFT1P37268 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
FDFT1P37268 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.15□□□□□ -1.91
FDFT1P37268 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.15□□□□□ -1.91
FDFT1P37268 AC055876.1-202ENST00000567053 138 ntBASIC3.15□□□□□ -1.91
FDFT1P37268 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.15□□□□□ -1.91
FDFT1P37268 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.15□□□□□ -1.91
FDFT1P37268 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.15□□□□□ -1.91
FDFT1P37268 PRELID3BP8-201ENST00000604148 295 ntBASIC3.15□□□□□ -1.91
FDFT1P37268 AL158211.2-201ENST00000607282 395 ntBASIC3.15□□□□□ -1.91
FDFT1P37268 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.15□□□□□ -1.91
FDFT1P37268 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.15□□□□□ -1.91
FDFT1P37268 AC084824.5-201ENST00000612009 413 ntBASIC3.15□□□□□ -1.91
FDFT1P37268 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.15□□□□□ -1.91
FDFT1P37268 U6.105-201ENST00000637379 88 ntBASIC3.15□□□□□ -1.91
FDFT1P37268 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
FDFT1P37268 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.15□□□□□ -1.91
FDFT1P37268 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
FDFT1P37268 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.15□□□□□ -1.91
FDFT1P37268 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
FDFT1P37268 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.14□□□□□ -1.91
FDFT1P37268 RPL23AP57-201ENST00000332361 466 ntBASIC3.14□□□□□ -1.91
FDFT1P37268 U3.19-201ENST00000390893 196 ntBASIC3.14□□□□□ -1.91
FDFT1P37268 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.14□□□□□ -1.91
FDFT1P37268 RN7SKP58-201ENST00000411010 305 ntBASIC3.14□□□□□ -1.91
FDFT1P37268 AC109780.2-201ENST00000413467 845 ntBASIC3.14□□□□□ -1.91
FDFT1P37268 AC099677.1-201ENST00000420575 175 ntBASIC3.14□□□□□ -1.91
FDFT1P37268 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.14□□□□□ -1.91
FDFT1P37268 TRIAP1P1-201ENST00000427062 225 ntBASIC3.14□□□□□ -1.91
FDFT1P37268 AC093151.1-201ENST00000427711 313 ntBASIC3.14□□□□□ -1.91
FDFT1P37268 RPL17P49-201ENST00000443728 411 ntBASIC3.14□□□□□ -1.91
FDFT1P37268 Z75741.1-201ENST00000446793 314 ntBASIC3.14□□□□□ -1.91
FDFT1P37268 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.14□□□□□ -1.91
FDFT1P37268 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.14□□□□□ -1.91
FDFT1P37268 AC091153.1-201ENST00000466297 402 ntBASIC3.14□□□□□ -1.91
FDFT1P37268 HMGB1P25-201ENST00000468402 607 ntBASIC3.14□□□□□ -1.91
FDFT1P37268 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.14□□□□□ -1.91
FDFT1P37268 HMGN2P13-201ENST00000476476 274 ntBASIC3.14□□□□□ -1.91
FDFT1P37268 AC017015.1-201ENST00000477387 286 ntBASIC3.14□□□□□ -1.91
FDFT1P37268 RN7SL20P-201ENST00000488827 297 ntBASIC3.14□□□□□ -1.91
FDFT1P37268 AP002812.1-201ENST00000495378 474 ntBASIC3.14□□□□□ -1.91
FDFT1P37268 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.14□□□□□ -1.91
FDFT1P37268 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.14□□□□□ -1.91
FDFT1P37268 ARL2BPP5-201ENST00000523141 481 ntBASIC3.14□□□□□ -1.91
FDFT1P37268 OR4R2P-201ENST00000530815 597 ntBASIC3.14□□□□□ -1.91
FDFT1P37268 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.14□□□□□ -1.91
FDFT1P37268 AC006518.2-201ENST00000542513 940 ntBASIC3.14□□□□□ -1.91
FDFT1P37268 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.14□□□□□ -1.91
FDFT1P37268 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms