Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC3.04□□□□□ -1.92
SCN4AP35499 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
SCN4AP35499 RNU1-73P-201ENST00000383971 164 ntBASIC3.03□□□□□ -1.92
SCN4AP35499 RNU6-178P-201ENST00000384631 104 ntBASIC3.03□□□□□ -1.92
SCN4AP35499 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.03□□□□□ -1.92
SCN4AP35499 ZNF965P-201ENST00000432501 817 ntBASIC3.03□□□□□ -1.92
SCN4AP35499 AC093716.1-201ENST00000435923 377 ntBASIC3.03□□□□□ -1.92
SCN4AP35499 MTND2P21-201ENST00000436242 1042 ntBASIC3.03□□□□□ -1.92
SCN4AP35499 ELOCP10-201ENST00000440624 327 ntBASIC3.03□□□□□ -1.92
SCN4AP35499 HMGN1P5-201ENST00000448591 263 ntBASIC3.03□□□□□ -1.92
SCN4AP35499 AC107222.1-201ENST00000510899 637 ntBASIC3.03□□□□□ -1.92
SCN4AP35499 HMGB1P47-201ENST00000511281 589 ntBASIC3.03□□□□□ -1.92
SCN4AP35499 RN7SKP24-201ENST00000515888 284 ntBASIC3.03□□□□□ -1.92
SCN4AP35499 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.03□□□□□ -1.92
SCN4AP35499 TRAV11-201ENST00000539512 339 ntBASIC3.03□□□□□ -1.92
SCN4AP35499 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.03□□□□□ -1.92
SCN4AP35499 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.03□□□□□ -1.92
SCN4AP35499 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.03□□□□□ -1.92
SCN4AP35499 CKS1BP1-201ENST00000555221 240 ntBASIC3.03□□□□□ -1.92
SCN4AP35499 ELOCP34-201ENST00000604436 327 ntBASIC3.03□□□□□ -1.92
SCN4AP35499 AC020658.4-201ENST00000613987 684 ntBASIC3.03□□□□□ -1.92
SCN4AP35499 AL354696.1-201ENST00000614652 497 ntBASIC3.03□□□□□ -1.92
SCN4AP35499 U4.3-201ENST00000621047 82 ntBASIC3.03□□□□□ -1.92
SCN4AP35499 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.03□□□□□ -1.92
SCN4AP35499 ADAM3A-203ENST00000461344 2157 ntBASIC3.03□□□□□ -1.92
SCN4AP35499 AL359715.4-201ENST00000606629 1436 ntBASIC3.03□□□□□ -1.93
SCN4AP35499 MIR421-201ENST00000365696 85 ntBASIC3.03□□□□□ -1.93
SCN4AP35499 RNU6-40P-201ENST00000384254 107 ntBASIC3.03□□□□□ -1.93
SCN4AP35499 Z86062.1-201ENST00000406773 777 ntBASIC3.03□□□□□ -1.93
SCN4AP35499 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.03□□□□□ -1.93
SCN4AP35499 RPS29P6-201ENST00000438196 145 ntBASIC3.03□□□□□ -1.93
SCN4AP35499 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.03□□□□□ -1.93
SCN4AP35499 AL645939.1-201ENST00000453429 797 ntBASIC3.03□□□□□ -1.93
SCN4AP35499 HNRNPDLP3-201ENST00000456745 380 ntBASIC3.03□□□□□ -1.93
SCN4AP35499 AC091179.1-201ENST00000461606 579 ntBASIC3.03□□□□□ -1.93
SCN4AP35499 AC234781.5-201ENST00000508429 271 ntBASIC3.03□□□□□ -1.93
SCN4AP35499 AC108471.1-201ENST00000513977 287 ntBASIC3.03□□□□□ -1.93
SCN4AP35499 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.03□□□□□ -1.93
SCN4AP35499 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.03□□□□□ -1.93
SCN4AP35499 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.03□□□□□ -1.93
SCN4AP35499 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.03□□□□□ -1.93
SCN4AP35499 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC3.03□□□□□ -1.93
SCN4AP35499 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.03□□□□□ -1.93
SCN4AP35499 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SCN4AP35499 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SCN4AP35499 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SCN4AP35499 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.02□□□□□ -1.93
SCN4AP35499 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.02□□□□□ -1.93
SCN4AP35499 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
SCN4AP35499 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SCN4AP35499 AC109315.1-201ENST00000584143 1347 ntBASIC3.02□□□□□ -1.93
SCN4AP35499 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
SCN4AP35499 VTA1P1-201ENST00000414044 866 ntBASIC3.02□□□□□ -1.93
SCN4AP35499 MTND4P24-201ENST00000424002 397 ntBASIC3.02□□□□□ -1.93
SCN4AP35499 VDAC1P3-201ENST00000434069 851 ntBASIC3.02□□□□□ -1.93
SCN4AP35499 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.02□□□□□ -1.93
SCN4AP35499 MTND5P8-201ENST00000449817 1083 ntBASIC3.02□□□□□ -1.93
SCN4AP35499 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.02□□□□□ -1.93
SCN4AP35499 AC025181.1-201ENST00000477507 416 ntBASIC3.02□□□□□ -1.93
SCN4AP35499 DYNLL1P6-201ENST00000503440 264 ntBASIC3.02□□□□□ -1.93
SCN4AP35499 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.02□□□□□ -1.93
SCN4AP35499 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.02□□□□□ -1.93
SCN4AP35499 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.02□□□□□ -1.93
SCN4AP35499 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SCN4AP35499 AC010338.1-201ENST00000621823 717 ntBASIC3.02□□□□□ -1.93
SCN4AP35499 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.01□□□□□ -1.93
SCN4AP35499 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SCN4AP35499 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
SCN4AP35499 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SCN4AP35499 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
SCN4AP35499 RNU4-31P-201ENST00000384211 141 ntBASIC3.01□□□□□ -1.93
SCN4AP35499 AC107081.1-201ENST00000414975 361 ntBASIC3.01□□□□□ -1.93
SCN4AP35499 AL096701.2-201ENST00000416920 238 ntBASIC3.01□□□□□ -1.93
SCN4AP35499 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.01□□□□□ -1.93
SCN4AP35499 BTBD7P2-201ENST00000441962 620 ntBASIC3.01□□□□□ -1.93
SCN4AP35499 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.01□□□□□ -1.93
SCN4AP35499 HGF-207ENST00000453018 721 ntTSL 3 BASIC3.01□□□□□ -1.93
SCN4AP35499 HSPE1P22-201ENST00000456856 327 ntBASIC3.01□□□□□ -1.93
SCN4AP35499 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.01□□□□□ -1.93
SCN4AP35499 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.01□□□□□ -1.93
SCN4AP35499 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.01□□□□□ -1.93
SCN4AP35499 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SCN4AP35499 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
SCN4AP35499 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.01□□□□□ -1.93
SCN4AP35499 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SCN4AP35499 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3□□□□□ -1.93
SCN4AP35499 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SCN4AP35499 AL121882.1-201ENST00000422893 417 ntBASIC3□□□□□ -1.93
SCN4AP35499 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3□□□□□ -1.93
SCN4AP35499 UBE2V1P5-201ENST00000440070 405 ntBASIC3□□□□□ -1.93
SCN4AP35499 RNU7-27P-201ENST00000459281 62 ntBASIC3□□□□□ -1.93
SCN4AP35499 RN7SL297P-201ENST00000483161 293 ntBASIC3□□□□□ -1.93
SCN4AP35499 AC132942.1-201ENST00000486753 483 ntBASIC3□□□□□ -1.93
SCN4AP35499 RPL9P6-201ENST00000492764 598 ntBASIC3□□□□□ -1.93
SCN4AP35499 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3□□□□□ -1.93
SCN4AP35499 RNU6-548P-201ENST00000517083 115 ntBASIC3□□□□□ -1.93
SCN4AP35499 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3□□□□□ -1.93
SCN4AP35499 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3□□□□□ -1.93
SCN4AP35499 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3□□□□□ -1.93
SCN4AP35499 AC005951.1-201ENST00000576706 485 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms