Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 RNA5SP38-201ENST00000410750 119 ntBASIC3.73□□□□□ -1.81
CTNNA1P35221 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.73□□□□□ -1.81
CTNNA1P35221 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CTNNA1P35221 RPS15AP6-201ENST00000420703 385 ntBASIC3.73□□□□□ -1.81
CTNNA1P35221 BEND7P1-201ENST00000422058 457 ntBASIC3.73□□□□□ -1.81
CTNNA1P35221 AC007742.1-201ENST00000425789 329 ntBASIC3.73□□□□□ -1.81
CTNNA1P35221 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.73□□□□□ -1.81
CTNNA1P35221 BX679664.1-201ENST00000434429 253 ntBASIC3.73□□□□□ -1.81
CTNNA1P35221 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.73□□□□□ -1.81
CTNNA1P35221 ELOCP26-201ENST00000436067 329 ntBASIC3.73□□□□□ -1.81
CTNNA1P35221 MTCO3P11-201ENST00000455103 774 ntBASIC3.73□□□□□ -1.81
CTNNA1P35221 AC108860.1-201ENST00000484521 383 ntBASIC3.73□□□□□ -1.81
CTNNA1P35221 AC114981.1-201ENST00000503897 678 ntBASIC3.73□□□□□ -1.81
CTNNA1P35221 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.73□□□□□ -1.81
CTNNA1P35221 DUXAP6-201ENST00000553858 601 ntBASIC3.73□□□□□ -1.81
CTNNA1P35221 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.73□□□□□ -1.81
CTNNA1P35221 MIR4286-201ENST00000580651 93 ntBASIC3.73□□□□□ -1.81
CTNNA1P35221 DUXAP11-201ENST00000603858 526 ntBASIC3.73□□□□□ -1.81
CTNNA1P35221 AC016877.3-201ENST00000606778 504 ntBASIC3.73□□□□□ -1.81
CTNNA1P35221 AC097504.2-201ENST00000608088 454 ntBASIC3.73□□□□□ -1.81
CTNNA1P35221 AP002826.1-201ENST00000608835 315 ntBASIC3.73□□□□□ -1.81
CTNNA1P35221 TUG1_1.1-201ENST00000610654 145 ntBASIC3.73□□□□□ -1.81
CTNNA1P35221 MIR6076-201ENST00000617521 113 ntBASIC3.73□□□□□ -1.81
CTNNA1P35221 AL138960.2-201ENST00000625145 535 ntBASIC3.73□□□□□ -1.81
CTNNA1P35221 SNORA50A-202ENST00000629536 136 ntBASIC3.73□□□□□ -1.81
CTNNA1P35221 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CTNNA1P35221 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CTNNA1P35221 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
CTNNA1P35221 MFSD8-236ENST00000641509 4050 ntBASIC3.73□□□□□ -1.81
CTNNA1P35221 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CTNNA1P35221 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CTNNA1P35221 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CTNNA1P35221 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.72□□□□□ -1.81
CTNNA1P35221 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CTNNA1P35221 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CTNNA1P35221 RNU1-75P-201ENST00000347264 129 ntBASIC3.72□□□□□ -1.81
CTNNA1P35221 RPS4XP3-201ENST00000398541 413 ntBASIC3.72□□□□□ -1.81
CTNNA1P35221 AL356131.1-201ENST00000405826 414 ntBASIC3.72□□□□□ -1.81
CTNNA1P35221 RN7SKP156-201ENST00000410308 342 ntBASIC3.72□□□□□ -1.81
CTNNA1P35221 AC009237.5-201ENST00000414271 501 ntBASIC3.72□□□□□ -1.81
CTNNA1P35221 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
CTNNA1P35221 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.72□□□□□ -1.81
CTNNA1P35221 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.72□□□□□ -1.81
CTNNA1P35221 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.72□□□□□ -1.81
CTNNA1P35221 AC140076.1-201ENST00000449897 361 ntBASIC3.72□□□□□ -1.81
CTNNA1P35221 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CTNNA1P35221 TRGVB-201ENST00000453257 471 ntBASIC3.72□□□□□ -1.81
CTNNA1P35221 RPS4XP2-201ENST00000458402 793 ntBASIC3.72□□□□□ -1.81
CTNNA1P35221 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CTNNA1P35221 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CTNNA1P35221 RPL30P14-201ENST00000482744 348 ntBASIC3.72□□□□□ -1.81
CTNNA1P35221 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.72□□□□□ -1.81
CTNNA1P35221 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.72□□□□□ -1.81
CTNNA1P35221 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.72□□□□□ -1.81
CTNNA1P35221 HMGB1P28-201ENST00000507778 552 ntBASIC3.72□□□□□ -1.81
CTNNA1P35221 MTND4LP22-201ENST00000508209 276 ntBASIC3.72□□□□□ -1.81
CTNNA1P35221 SNORA19.3-201ENST00000516165 130 ntBASIC3.72□□□□□ -1.81
CTNNA1P35221 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.72□□□□□ -1.81
CTNNA1P35221 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.72□□□□□ -1.81
CTNNA1P35221 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.72□□□□□ -1.81
CTNNA1P35221 OR8R1P-201ENST00000543943 764 ntBASIC3.72□□□□□ -1.81
CTNNA1P35221 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.72□□□□□ -1.81
CTNNA1P35221 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.72□□□□□ -1.81
CTNNA1P35221 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC3.72□□□□□ -1.81
CTNNA1P35221 MTCO3P24-201ENST00000572729 782 ntBASIC3.72□□□□□ -1.81
CTNNA1P35221 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.72□□□□□ -1.81
CTNNA1P35221 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.72□□□□□ -1.81
CTNNA1P35221 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.72□□□□□ -1.81
CTNNA1P35221 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.72□□□□□ -1.81
CTNNA1P35221 BNIP3P11-201ENST00000603878 563 ntBASIC3.72□□□□□ -1.81
CTNNA1P35221 AC009220.3-201ENST00000604318 586 ntBASIC3.72□□□□□ -1.81
CTNNA1P35221 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.72□□□□□ -1.81
CTNNA1P35221 AP003355.3-201ENST00000623465 114 ntBASIC3.72□□□□□ -1.81
CTNNA1P35221 AC090897.3-201ENST00000636973 1157 ntBASIC3.72□□□□□ -1.81
CTNNA1P35221 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CTNNA1P35221 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CTNNA1P35221 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.81
CTNNA1P35221 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.71□□□□□ -1.82
CTNNA1P35221 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CTNNA1P35221 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CTNNA1P35221 MIR135A2-201ENST00000384854 100 ntBASIC3.71□□□□□ -1.82
CTNNA1P35221 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CTNNA1P35221 SNORA48.8-201ENST00000391324 134 ntBASIC3.71□□□□□ -1.82
CTNNA1P35221 RPL32P23-201ENST00000397237 405 ntBASIC3.71□□□□□ -1.82
CTNNA1P35221 EI24P2-201ENST00000397776 1076 ntBASIC3.71□□□□□ -1.82
CTNNA1P35221 DHFRP6-201ENST00000401776 268 ntBASIC3.71□□□□□ -1.82
CTNNA1P35221 RNU2-43P-201ENST00000410306 190 ntBASIC3.71□□□□□ -1.82
CTNNA1P35221 RNU6-628P-201ENST00000410675 107 ntBASIC3.71□□□□□ -1.82
CTNNA1P35221 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.71□□□□□ -1.82
CTNNA1P35221 RPL21P40-201ENST00000428586 483 ntBASIC3.71□□□□□ -1.82
CTNNA1P35221 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.71□□□□□ -1.82
CTNNA1P35221 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.71□□□□□ -1.82
CTNNA1P35221 HSPE1P28-201ENST00000443139 211 ntBASIC3.71□□□□□ -1.82
CTNNA1P35221 TPT1P12-201ENST00000448968 492 ntBASIC3.71□□□□□ -1.82
CTNNA1P35221 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.71□□□□□ -1.82
CTNNA1P35221 AC104982.1-201ENST00000478775 574 ntBASIC3.71□□□□□ -1.82
CTNNA1P35221 AP000563.1-201ENST00000490865 758 ntBASIC3.71□□□□□ -1.82
CTNNA1P35221 SNORA31.1-201ENST00000515993 133 ntBASIC3.71□□□□□ -1.82
CTNNA1P35221 SNORA31.5-201ENST00000516190 133 ntBASIC3.71□□□□□ -1.82
CTNNA1P35221 SNORA70.16-201ENST00000516390 95 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms