Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AP000705.1-201ENST00000454567 350 ntBASIC2.63□□□□□ -1.99
HLA-DMAP28067 RPL23AP31-201ENST00000456160 467 ntBASIC2.63□□□□□ -1.99
HLA-DMAP28067 SETP11-201ENST00000473027 690 ntBASIC2.63□□□□□ -1.99
HLA-DMAP28067 RN7SL20P-201ENST00000488827 297 ntBASIC2.63□□□□□ -1.99
HLA-DMAP28067 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.63□□□□□ -1.99
HLA-DMAP28067 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC2.63□□□□□ -1.99
HLA-DMAP28067 AC021678.1-201ENST00000505195 936 ntBASIC2.63□□□□□ -1.99
HLA-DMAP28067 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
HLA-DMAP28067 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC2.63□□□□□ -1.99
HLA-DMAP28067 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
HLA-DMAP28067 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.63□□□□□ -1.99
HLA-DMAP28067 AC087373.1-201ENST00000524920 491 ntBASIC2.63□□□□□ -1.99
HLA-DMAP28067 HIGD1AP5-201ENST00000529959 259 ntBASIC2.63□□□□□ -1.99
HLA-DMAP28067 ARL6IP1P1-201ENST00000545836 610 ntBASIC2.63□□□□□ -1.99
HLA-DMAP28067 AC007224.1-201ENST00000564410 144 ntBASIC2.63□□□□□ -1.99
HLA-DMAP28067 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.63□□□□□ -1.99
HLA-DMAP28067 AC106734.1-201ENST00000568646 663 ntBASIC2.63□□□□□ -1.99
HLA-DMAP28067 MIR2682-201ENST00000580305 110 ntBASIC2.63□□□□□ -1.99
HLA-DMAP28067 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.63□□□□□ -1.99
HLA-DMAP28067 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.63□□□□□ -1.99
HLA-DMAP28067 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.63□□□□□ -1.99
HLA-DMAP28067 AC090116.1-201ENST00000615679 446 ntBASIC2.63□□□□□ -1.99
HLA-DMAP28067 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC2.63□□□□□ -1.99
HLA-DMAP28067 AP003400.6-201ENST00000624698 740 ntBASIC2.63□□□□□ -1.99
HLA-DMAP28067 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.63□□□□□ -1.99
HLA-DMAP28067 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.62□□□□□ -1.99
HLA-DMAP28067 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.62□□□□□ -1.99
HLA-DMAP28067 AC009487.2-201ENST00000420969 6821 ntBASIC2.62□□□□□ -1.99
HLA-DMAP28067 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.62□□□□□ -1.99
HLA-DMAP28067 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.62□□□□□ -1.99
HLA-DMAP28067 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
HLA-DMAP28067 RNU6-1339P-201ENST00000363574 91 ntBASIC2.62□□□□□ -1.99
HLA-DMAP28067 SNORD56.5-201ENST00000364281 72 ntBASIC2.62□□□□□ -1.99
HLA-DMAP28067 SNORA70.2-201ENST00000364506 135 ntBASIC2.62□□□□□ -1.99
HLA-DMAP28067 PTGES3P2-201ENST00000407942 482 ntBASIC2.62□□□□□ -1.99
HLA-DMAP28067 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.62□□□□□ -1.99
HLA-DMAP28067 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC2.62□□□□□ -1.99
HLA-DMAP28067 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.62□□□□□ -1.99
HLA-DMAP28067 AL645638.1-201ENST00000440519 361 ntBASIC2.62□□□□□ -1.99
HLA-DMAP28067 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.62□□□□□ -1.99
HLA-DMAP28067 UBBP3-201ENST00000445497 241 ntBASIC2.62□□□□□ -1.99
HLA-DMAP28067 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.62□□□□□ -1.99
HLA-DMAP28067 HMGN3P1-201ENST00000453847 193 ntBASIC2.62□□□□□ -1.99
HLA-DMAP28067 AL031183.1-201ENST00000457667 207 ntBASIC2.62□□□□□ -1.99
HLA-DMAP28067 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.62□□□□□ -1.99
HLA-DMAP28067 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.62□□□□□ -1.99
HLA-DMAP28067 AC090525.1-201ENST00000479116 478 ntBASIC2.62□□□□□ -1.99
HLA-DMAP28067 HSPD1P15-201ENST00000505573 1122 ntBASIC2.62□□□□□ -1.99
HLA-DMAP28067 MLLT10P2-201ENST00000506434 249 ntBASIC2.62□□□□□ -1.99
HLA-DMAP28067 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.62□□□□□ -1.99
HLA-DMAP28067 OR8K4P-201ENST00000534608 872 ntBASIC2.62□□□□□ -1.99
HLA-DMAP28067 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.62□□□□□ -1.99
HLA-DMAP28067 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC2.62□□□□□ -1.99
HLA-DMAP28067 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC2.62□□□□□ -1.99
HLA-DMAP28067 ZNF415P1-201ENST00000582279 1166 ntBASIC2.62□□□□□ -1.99
HLA-DMAP28067 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.62□□□□□ -1.99
HLA-DMAP28067 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC2.62□□□□□ -1.99
HLA-DMAP28067 AC020895.1-201ENST00000595362 272 ntBASIC2.62□□□□□ -1.99
HLA-DMAP28067 AL671309.1-201ENST00000603750 544 ntBASIC2.62□□□□□ -1.99
HLA-DMAP28067 AC025588.3-201ENST00000604182 274 ntBASIC2.62□□□□□ -1.99
HLA-DMAP28067 AP001330.4-201ENST00000604350 154 ntBASIC2.62□□□□□ -1.99
HLA-DMAP28067 RPL23AP88-201ENST00000605759 454 ntBASIC2.62□□□□□ -1.99
HLA-DMAP28067 AC096586.1-201ENST00000610267 561 ntBASIC2.62□□□□□ -1.99
HLA-DMAP28067 AC083809.1-201ENST00000615051 472 ntBASIC2.62□□□□□ -1.99
HLA-DMAP28067 AL445493.3-201ENST00000619568 477 ntBASIC2.62□□□□□ -1.99
HLA-DMAP28067 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC2.62□□□□□ -1.99
HLA-DMAP28067 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
HLA-DMAP28067 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
HLA-DMAP28067 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
HLA-DMAP28067 SEC63P2-201ENST00000503863 1939 ntBASIC2.62□□□□□ -1.99
HLA-DMAP28067 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.62□□□□□ -1.99
HLA-DMAP28067 ZNF285B-201ENST00000561698 1767 ntBASIC2.61□□□□□ -1.99
HLA-DMAP28067 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.61□□□□□ -1.99
HLA-DMAP28067 OR1S2-201ENST00000302592 978 ntBASIC2.61□□□□□ -1.99
HLA-DMAP28067 RNU5D-1-201ENST00000363299 116 ntBASIC2.61□□□□□ -1.99
HLA-DMAP28067 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HLA-DMAP28067 RNU6-441P-201ENST00000384545 106 ntBASIC2.61□□□□□ -1.99
HLA-DMAP28067 SNORA11B-201ENST00000408175 129 ntBASIC2.61□□□□□ -1.99
HLA-DMAP28067 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.61□□□□□ -1.99
HLA-DMAP28067 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC2.61□□□□□ -1.99
HLA-DMAP28067 HMGN1P24-201ENST00000412282 298 ntBASIC2.61□□□□□ -1.99
HLA-DMAP28067 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.61□□□□□ -1.99
HLA-DMAP28067 FNDC3CP-201ENST00000420795 1155 ntBASIC2.61□□□□□ -1.99
HLA-DMAP28067 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.61□□□□□ -1.99
HLA-DMAP28067 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.61□□□□□ -1.99
HLA-DMAP28067 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.61□□□□□ -1.99
HLA-DMAP28067 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC2.61□□□□□ -1.99
HLA-DMAP28067 AC010881.1-201ENST00000433830 235 ntBASIC2.61□□□□□ -1.99
HLA-DMAP28067 H2AFZP6-201ENST00000444403 394 ntBASIC2.61□□□□□ -1.99
HLA-DMAP28067 MTND1P33-201ENST00000446251 917 ntBASIC2.61□□□□□ -1.99
HLA-DMAP28067 AC005002.1-201ENST00000447458 540 ntBASIC2.61□□□□□ -1.99
HLA-DMAP28067 AL353718.1-201ENST00000451028 517 ntBASIC2.61□□□□□ -1.99
HLA-DMAP28067 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC2.61□□□□□ -1.99
HLA-DMAP28067 RPS27P23-201ENST00000487608 251 ntBASIC2.61□□□□□ -1.99
HLA-DMAP28067 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC2.61□□□□□ -1.99
HLA-DMAP28067 MTND5P4-201ENST00000514978 288 ntBASIC2.61□□□□□ -1.99
HLA-DMAP28067 AP000916.1-201ENST00000533869 835 ntBASIC2.61□□□□□ -1.99
HLA-DMAP28067 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HLA-DMAP28067 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC2.61□□□□□ -1.99
HLA-DMAP28067 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms