Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 SNRPGP6-201ENST00000451124 220 ntBASIC5.81□□□□□ -1.48
ERCC3P19447 AL513533.1-201ENST00000453728 415 ntBASIC5.81□□□□□ -1.48
ERCC3P19447 snoU13.3-201ENST00000459441 104 ntBASIC5.81□□□□□ -1.48
ERCC3P19447 AC007537.2-201ENST00000472093 511 ntBASIC5.81□□□□□ -1.48
ERCC3P19447 AC012158.1-204ENST00000483430 465 ntBASIC5.81□□□□□ -1.48
ERCC3P19447 AC026427.2-201ENST00000506228 536 ntBASIC5.81□□□□□ -1.48
ERCC3P19447 RNA5SP401-201ENST00000515920 127 ntBASIC5.81□□□□□ -1.48
ERCC3P19447 Y_RNA.702-201ENST00000516843 96 ntBASIC5.81□□□□□ -1.48
ERCC3P19447 RAB9BP1-201ENST00000519581 626 ntBASIC5.81□□□□□ -1.48
ERCC3P19447 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.81□□□□□ -1.48
ERCC3P19447 AP006289.1-201ENST00000538089 277 ntBASIC5.81□□□□□ -1.48
ERCC3P19447 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC5.81□□□□□ -1.48
ERCC3P19447 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.81□□□□□ -1.48
ERCC3P19447 AC091042.1-201ENST00000579213 173 ntBASIC5.81□□□□□ -1.48
ERCC3P19447 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.81□□□□□ -1.48
ERCC3P19447 AC105224.1-201ENST00000587055 421 ntBASIC5.81□□□□□ -1.48
ERCC3P19447 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC5.81□□□□□ -1.48
ERCC3P19447 MIR6780A-201ENST00000615089 68 ntBASIC5.81□□□□□ -1.48
ERCC3P19447 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.81□□□□□ -1.48
ERCC3P19447 AC092794.2-201ENST00000620933 563 ntBASIC5.81□□□□□ -1.48
ERCC3P19447 FER-210ENST00000628534 558 ntTSL 5 BASIC5.81□□□□□ -1.48
ERCC3P19447 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.81□□□□□ -1.48
ERCC3P19447 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
ERCC3P19447 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ERCC3P19447 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.81□□□□□ -1.48
ERCC3P19447 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ERCC3P19447 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC5.81□□□□□ -1.48
ERCC3P19447 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ERCC3P19447 NXPH1-205ENST00000602349 1953 ntBASIC5.8□□□□□ -1.48
ERCC3P19447 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ERCC3P19447 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
ERCC3P19447 NACAP2-201ENST00000318548 624 ntBASIC5.8□□□□□ -1.48
ERCC3P19447 AC079741.1-201ENST00000321498 212 ntBASIC5.8□□□□□ -1.48
ERCC3P19447 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
ERCC3P19447 RNA5SP191-201ENST00000362585 102 ntBASIC5.8□□□□□ -1.48
ERCC3P19447 Y_RNA.160-201ENST00000363677 92 ntBASIC5.8□□□□□ -1.48
ERCC3P19447 RNU1-32P-201ENST00000363937 159 ntBASIC5.8□□□□□ -1.48
ERCC3P19447 SNORA69-201ENST00000383895 132 ntBASIC5.8□□□□□ -1.48
ERCC3P19447 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ERCC3P19447 RPS16P5-201ENST00000406501 404 ntBASIC5.8□□□□□ -1.48
ERCC3P19447 RNU4-65P-201ENST00000410473 140 ntBASIC5.8□□□□□ -1.48
ERCC3P19447 AC138393.2-201ENST00000414742 246 ntBASIC5.8□□□□□ -1.48
ERCC3P19447 AF186996.5-201ENST00000418098 904 ntBASIC5.8□□□□□ -1.48
ERCC3P19447 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.8□□□□□ -1.48
ERCC3P19447 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ERCC3P19447 AC092017.2-201ENST00000427600 362 ntBASIC5.8□□□□□ -1.48
ERCC3P19447 RPL7AP49-201ENST00000429522 581 ntBASIC5.8□□□□□ -1.48
ERCC3P19447 AL591438.1-201ENST00000433508 581 ntBASIC5.8□□□□□ -1.48
ERCC3P19447 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC5.8□□□□□ -1.48
ERCC3P19447 H2AFZP5-201ENST00000446960 382 ntBASIC5.8□□□□□ -1.48
ERCC3P19447 BX842559.2-201ENST00000451418 605 ntBASIC5.8□□□□□ -1.48
ERCC3P19447 RPL36AP13-201ENST00000457490 317 ntBASIC5.8□□□□□ -1.48
ERCC3P19447 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.8□□□□□ -1.48
ERCC3P19447 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
ERCC3P19447 AC078785.3-201ENST00000476607 425 ntBASIC5.8□□□□□ -1.48
ERCC3P19447 RN7SL814P-201ENST00000487715 300 ntBASIC5.8□□□□□ -1.48
ERCC3P19447 NIFKP7-201ENST00000503365 834 ntBASIC5.8□□□□□ -1.48
ERCC3P19447 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC5.8□□□□□ -1.48
ERCC3P19447 RNU6-1095P-201ENST00000516148 108 ntBASIC5.8□□□□□ -1.48
ERCC3P19447 RNU4-60P-201ENST00000517239 135 ntBASIC5.8□□□□□ -1.48
ERCC3P19447 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.8□□□□□ -1.48
ERCC3P19447 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.8□□□□□ -1.48
ERCC3P19447 MGST1-215ENST00000540056 546 ntTSL 3 BASIC5.8□□□□□ -1.48
ERCC3P19447 AL109766.1-201ENST00000555080 552 ntBASIC5.8□□□□□ -1.48
ERCC3P19447 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.8□□□□□ -1.48
ERCC3P19447 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC5.8□□□□□ -1.48
ERCC3P19447 AC209154.1-201ENST00000582156 337 ntBASIC5.8□□□□□ -1.48
ERCC3P19447 HMGB2P1-201ENST00000591146 634 ntBASIC5.8□□□□□ -1.48
ERCC3P19447 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC5.8□□□□□ -1.48
ERCC3P19447 AL034351.1-201ENST00000605288 668 ntBASIC5.8□□□□□ -1.48
ERCC3P19447 AP002360.3-201ENST00000607673 710 ntBASIC5.8□□□□□ -1.48
ERCC3P19447 AC103710.2-201ENST00000609912 942 ntBASIC5.8□□□□□ -1.48
ERCC3P19447 AL603758.1-201ENST00000618654 241 ntBASIC5.8□□□□□ -1.48
ERCC3P19447 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.8□□□□□ -1.48
ERCC3P19447 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
ERCC3P19447 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ERCC3P19447 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
ERCC3P19447 AC063976.2-201ENST00000425667 3556 ntBASIC5.8□□□□□ -1.48
ERCC3P19447 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
ERCC3P19447 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ERCC3P19447 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.8□□□□□ -1.48
ERCC3P19447 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.8□□□□□ -1.48
ERCC3P19447 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.8□□□□□ -1.48
ERCC3P19447 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.79□□□□□ -1.48
ERCC3P19447 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.79□□□□□ -1.48
ERCC3P19447 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.79□□□□□ -1.48
ERCC3P19447 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ERCC3P19447 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ERCC3P19447 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ERCC3P19447 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
ERCC3P19447 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
ERCC3P19447 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ERCC3P19447 Y_RNA.70-201ENST00000362886 110 ntBASIC5.79□□□□□ -1.48
ERCC3P19447 U3.15-201ENST00000365398 212 ntBASIC5.79□□□□□ -1.48
ERCC3P19447 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
ERCC3P19447 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ERCC3P19447 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ERCC3P19447 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
ERCC3P19447 SNORD37.1-201ENST00000390968 65 ntBASIC5.79□□□□□ -1.48
ERCC3P19447 RNU6-1158P-201ENST00000391167 107 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms