Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC4.84□□□□□ -1.63
ATF4P18848 RN7SL714P-201ENST00000487050 298 ntBASIC4.84□□□□□ -1.63
ATF4P18848 RPS15AP34-201ENST00000487776 387 ntBASIC4.84□□□□□ -1.63
ATF4P18848 TRBVA-201ENST00000498804 316 ntBASIC4.84□□□□□ -1.63
ATF4P18848 NDUFA5P12-201ENST00000503796 343 ntBASIC4.84□□□□□ -1.63
ATF4P18848 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
ATF4P18848 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.84□□□□□ -1.63
ATF4P18848 RANP9-201ENST00000519957 271 ntBASIC4.84□□□□□ -1.63
ATF4P18848 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC4.84□□□□□ -1.63
ATF4P18848 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC4.84□□□□□ -1.63
ATF4P18848 MIR3189-201ENST00000578735 73 ntBASIC4.84□□□□□ -1.63
ATF4P18848 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.84□□□□□ -1.63
ATF4P18848 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC4.84□□□□□ -1.63
ATF4P18848 AL356055.1-201ENST00000602528 446 ntBASIC4.84□□□□□ -1.63
ATF4P18848 AC114477.1-201ENST00000605097 605 ntBASIC4.84□□□□□ -1.63
ATF4P18848 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.84□□□□□ -1.63
ATF4P18848 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
ATF4P18848 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
ATF4P18848 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.84□□□□□ -1.64
ATF4P18848 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.64
ATF4P18848 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.64
ATF4P18848 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
ATF4P18848 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
ATF4P18848 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ATF4P18848 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
ATF4P18848 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
ATF4P18848 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ATF4P18848 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
ATF4P18848 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
ATF4P18848 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ATF4P18848 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ATF4P18848 LARP1BP1-201ENST00000506036 1359 ntBASIC4.83□□□□□ -1.64
ATF4P18848 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
ATF4P18848 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ATF4P18848 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ATF4P18848 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ATF4P18848 SNORA64.3-201ENST00000365647 134 ntBASIC4.83□□□□□ -1.64
ATF4P18848 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ATF4P18848 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
ATF4P18848 RNA5SP219-201ENST00000390940 113 ntBASIC4.83□□□□□ -1.64
ATF4P18848 AL139039.1-201ENST00000401900 692 ntBASIC4.83□□□□□ -1.64
ATF4P18848 AL078599.1-201ENST00000402075 293 ntBASIC4.83□□□□□ -1.64
ATF4P18848 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.83□□□□□ -1.64
ATF4P18848 RPL7AP51-201ENST00000422016 760 ntBASIC4.83□□□□□ -1.64
ATF4P18848 MTND1P14-201ENST00000427400 950 ntBASIC4.83□□□□□ -1.64
ATF4P18848 AL590383.1-201ENST00000428602 75 ntBASIC4.83□□□□□ -1.64
ATF4P18848 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.83□□□□□ -1.64
ATF4P18848 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC4.83□□□□□ -1.64
ATF4P18848 NDUFA5P4-201ENST00000436704 385 ntBASIC4.83□□□□□ -1.64
ATF4P18848 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC4.83□□□□□ -1.64
ATF4P18848 RPL5P7-201ENST00000444235 813 ntBASIC4.83□□□□□ -1.64
ATF4P18848 NDUFS5P3-201ENST00000450668 321 ntBASIC4.83□□□□□ -1.64
ATF4P18848 AC118758.1-202ENST00000454719 225 ntBASIC4.83□□□□□ -1.64
ATF4P18848 AC245028.2-201ENST00000458673 253 ntBASIC4.83□□□□□ -1.64
ATF4P18848 PFN1P6-201ENST00000476786 399 ntBASIC4.83□□□□□ -1.64
ATF4P18848 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC4.83□□□□□ -1.64
ATF4P18848 AC005921.1-201ENST00000510589 286 ntBASIC4.83□□□□□ -1.64
ATF4P18848 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.83□□□□□ -1.64
ATF4P18848 AC104136.1-201ENST00000512969 394 ntBASIC4.83□□□□□ -1.64
ATF4P18848 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC4.83□□□□□ -1.64
ATF4P18848 SCARNA15.2-201ENST00000516409 127 ntBASIC4.83□□□□□ -1.64
ATF4P18848 ATP5F1P5-201ENST00000526403 760 ntBASIC4.83□□□□□ -1.64
ATF4P18848 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC4.83□□□□□ -1.64
ATF4P18848 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.83□□□□□ -1.64
ATF4P18848 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.83□□□□□ -1.64
ATF4P18848 SCOCP1-201ENST00000554676 349 ntBASIC4.83□□□□□ -1.64
ATF4P18848 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.83□□□□□ -1.64
ATF4P18848 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
ATF4P18848 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC4.83□□□□□ -1.64
ATF4P18848 MIR3941-201ENST00000582572 103 ntBASIC4.83□□□□□ -1.64
ATF4P18848 MIR4310-201ENST00000582950 57 ntBASIC4.83□□□□□ -1.64
ATF4P18848 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.83□□□□□ -1.64
ATF4P18848 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.83□□□□□ -1.64
ATF4P18848 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ATF4P18848 AC004805.3-201ENST00000603178 310 ntBASIC4.83□□□□□ -1.64
ATF4P18848 AC021646.1-201ENST00000605469 484 ntBASIC4.83□□□□□ -1.64
ATF4P18848 AC107294.1-201ENST00000609524 467 ntBASIC4.83□□□□□ -1.64
ATF4P18848 AC007497.1-201ENST00000610421 561 ntBASIC4.83□□□□□ -1.64
ATF4P18848 AC006924.1-201ENST00000610750 559 ntBASIC4.83□□□□□ -1.64
ATF4P18848 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC4.83□□□□□ -1.64
ATF4P18848 AP003400.5-201ENST00000624827 617 ntBASIC4.83□□□□□ -1.64
ATF4P18848 MIR1302-1-201ENST00000637932 143 ntBASIC4.83□□□□□ -1.64
ATF4P18848 SALL4P2-201ENST00000423288 2910 ntBASIC4.83□□□□□ -1.64
ATF4P18848 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ATF4P18848 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
ATF4P18848 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ATF4P18848 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ATF4P18848 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ATF4P18848 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
ATF4P18848 AC009962.1-201ENST00000567327 3813 ntBASIC4.83□□□□□ -1.64
ATF4P18848 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ATF4P18848 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ATF4P18848 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.83□□□□□ -1.64
ATF4P18848 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ATF4P18848 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.83□□□□□ -1.64
ATF4P18848 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.82□□□□□ -1.64
ATF4P18848 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ATF4P18848 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
ATF4P18848 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ATF4P18848 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms