Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC7.34□□□□□ -1.23
CD44P16070 AC023968.1-201ENST00000560719 475 ntBASIC7.34□□□□□ -1.23
CD44P16070 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC7.34□□□□□ -1.23
CD44P16070 AC091932.1-201ENST00000569381 427 ntBASIC7.34□□□□□ -1.23
CD44P16070 RN7SL131P-201ENST00000579043 256 ntBASIC7.34□□□□□ -1.23
CD44P16070 TEX41-243ENST00000614173 190 ntTSL 5 BASIC7.34□□□□□ -1.23
CD44P16070 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC7.34□□□□□ -1.23
CD44P16070 BTK-209ENST00000618050 2417 ntTSL 5 BASIC7.34□□□□□ -1.23
CD44P16070 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC7.34□□□□□ -1.23
CD44P16070 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC7.34□□□□□ -1.23
CD44P16070 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC7.34□□□□□ -1.23
CD44P16070 AC012254.3-201ENST00000591183 2117 ntBASIC7.34□□□□□ -1.23
CD44P16070 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CD44P16070 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CD44P16070 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC7.34□□□□□ -1.23
CD44P16070 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
CD44P16070 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.24
CD44P16070 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC7.34□□□□□ -1.24
CD44P16070 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC7.33□□□□□ -1.24
CD44P16070 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
CD44P16070 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
CD44P16070 TUBBP10-201ENST00000427668 1301 ntBASIC7.33□□□□□ -1.24
CD44P16070 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CD44P16070 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CD44P16070 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC7.33□□□□□ -1.24
CD44P16070 SRRM1P3-201ENST00000426911 2678 ntBASIC7.33□□□□□ -1.24
CD44P16070 AC062022.1-201ENST00000451026 1684 ntBASIC7.33□□□□□ -1.24
CD44P16070 AC245100.2-201ENST00000454544 1679 ntBASIC7.33□□□□□ -1.24
CD44P16070 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CD44P16070 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CD44P16070 STAG3L4-201ENST00000352103 530 ntBASIC7.33□□□□□ -1.24
CD44P16070 RNA5SP302-201ENST00000364896 100 ntBASIC7.33□□□□□ -1.24
CD44P16070 LDHAP5-201ENST00000394996 622 ntBASIC7.33□□□□□ -1.24
CD44P16070 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC7.33□□□□□ -1.24
CD44P16070 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC7.33□□□□□ -1.24
CD44P16070 AF186996.5-201ENST00000418098 904 ntBASIC7.33□□□□□ -1.24
CD44P16070 RPS20P1-201ENST00000434853 354 ntBASIC7.33□□□□□ -1.24
CD44P16070 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC7.33□□□□□ -1.24
CD44P16070 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC7.33□□□□□ -1.24
CD44P16070 RNA5SP400-201ENST00000517155 111 ntBASIC7.33□□□□□ -1.24
CD44P16070 AC008694.2-201ENST00000517591 306 ntBASIC7.33□□□□□ -1.24
CD44P16070 AC139365.2-201ENST00000517972 253 ntBASIC7.33□□□□□ -1.24
CD44P16070 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC7.33□□□□□ -1.24
CD44P16070 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC7.33□□□□□ -1.24
CD44P16070 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC7.33□□□□□ -1.24
CD44P16070 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC7.33□□□□□ -1.24
CD44P16070 AC006512.2-201ENST00000543250 486 ntBASIC7.33□□□□□ -1.24
CD44P16070 MYL2-203ENST00000548438 664 ntTSL 3 BASIC7.33□□□□□ -1.24
CD44P16070 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC7.33□□□□□ -1.24
CD44P16070 AC091304.5-201ENST00000568969 158 ntBASIC7.33□□□□□ -1.24
CD44P16070 AC002310.3-201ENST00000569728 723 ntBASIC7.33□□□□□ -1.24
CD44P16070 RPL23AP87-202ENST00000573039 466 ntBASIC7.33□□□□□ -1.24
CD44P16070 RN7SL270P-201ENST00000579643 281 ntBASIC7.33□□□□□ -1.24
CD44P16070 MIR3145-201ENST00000580727 82 ntBASIC7.33□□□□□ -1.24
CD44P16070 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC7.33□□□□□ -1.24
CD44P16070 SRGNP1-201ENST00000603392 451 ntBASIC7.33□□□□□ -1.24
CD44P16070 AC012213.2-201ENST00000562917 4597 ntBASIC7.33□□□□□ -1.24
CD44P16070 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CD44P16070 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CD44P16070 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CD44P16070 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
CD44P16070 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CD44P16070 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
CD44P16070 AC015799.1-201ENST00000622996 3122 ntBASIC7.33□□□□□ -1.24
CD44P16070 NBPF8-201ENST00000583271 5330 ntBASIC7.33□□□□□ -1.24
CD44P16070 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
CD44P16070 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7.32□□□□□ -1.24
CD44P16070 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CD44P16070 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CD44P16070 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC7.32□□□□□ -1.24
CD44P16070 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CD44P16070 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC7.32□□□□□ -1.24
CD44P16070 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CD44P16070 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CD44P16070 RNA5SP152-201ENST00000365184 110 ntBASIC7.32□□□□□ -1.24
CD44P16070 AC068538.1-201ENST00000376856 336 ntBASIC7.32□□□□□ -1.24
CD44P16070 RNU6-36P-201ENST00000384172 107 ntBASIC7.32□□□□□ -1.24
CD44P16070 RNU6-16P-201ENST00000384385 107 ntBASIC7.32□□□□□ -1.24
CD44P16070 RNU6-15P-201ENST00000384534 107 ntBASIC7.32□□□□□ -1.24
CD44P16070 RNU6-1179P-201ENST00000384667 107 ntBASIC7.32□□□□□ -1.24
CD44P16070 RNU1-139P-201ENST00000391307 165 ntBASIC7.32□□□□□ -1.24
CD44P16070 RNA5SP225-201ENST00000410874 135 ntBASIC7.32□□□□□ -1.24
CD44P16070 AC069218.2-201ENST00000411665 344 ntBASIC7.32□□□□□ -1.24
CD44P16070 SNORD56-201ENST00000413522 71 ntBASIC7.32□□□□□ -1.24
CD44P16070 SPATA20P1-201ENST00000423089 438 ntBASIC7.32□□□□□ -1.24
CD44P16070 FDPSP6-201ENST00000425091 512 ntBASIC7.32□□□□□ -1.24
CD44P16070 AP000907.1-201ENST00000428428 510 ntBASIC7.32□□□□□ -1.24
CD44P16070 COX6B1P7-201ENST00000430845 235 ntBASIC7.32□□□□□ -1.24
CD44P16070 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC7.32□□□□□ -1.24
CD44P16070 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC7.32□□□□□ -1.24
CD44P16070 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC7.32□□□□□ -1.24
CD44P16070 AL136038.1-201ENST00000497246 351 ntBASIC7.32□□□□□ -1.24
CD44P16070 RNU6-390P-201ENST00000516259 103 ntBASIC7.32□□□□□ -1.24
CD44P16070 RNU6-1146P-201ENST00000516282 102 ntBASIC7.32□□□□□ -1.24
CD44P16070 RNU6-914P-201ENST00000516749 109 ntBASIC7.32□□□□□ -1.24
CD44P16070 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC7.32□□□□□ -1.24
CD44P16070 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC7.32□□□□□ -1.24
CD44P16070 AC103996.1-201ENST00000555468 102 ntBASIC7.32□□□□□ -1.24
CD44P16070 AC133485.4-201ENST00000561835 220 ntBASIC7.32□□□□□ -1.24
CD44P16070 AC138907.4-201ENST00000570107 226 ntBASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms