Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 MTND5P24-201ENST00000438892 1767 ntBASIC4.17□□□□□ -1.74
HOXC6P09630 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HOXC6P09630 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.17□□□□□ -1.74
HOXC6P09630 AL353743.4-201ENST00000422653 1547 ntBASIC4.17□□□□□ -1.74
HOXC6P09630 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HOXC6P09630 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.17□□□□□ -1.74
HOXC6P09630 AC007685.1-201ENST00000329806 452 ntBASIC4.17□□□□□ -1.74
HOXC6P09630 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HOXC6P09630 Y_RNA.3-201ENST00000362331 103 ntBASIC4.17□□□□□ -1.74
HOXC6P09630 RNU6-839P-201ENST00000363347 108 ntBASIC4.17□□□□□ -1.74
HOXC6P09630 RN7SKP177-201ENST00000410567 355 ntBASIC4.17□□□□□ -1.74
HOXC6P09630 RNA5SP120-201ENST00000410900 112 ntBASIC4.17□□□□□ -1.74
HOXC6P09630 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXC6P09630 AC048351.1-201ENST00000420064 602 ntBASIC4.17□□□□□ -1.74
HOXC6P09630 AL391219.1-201ENST00000422570 483 ntBASIC4.17□□□□□ -1.74
HOXC6P09630 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXC6P09630 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.17□□□□□ -1.74
HOXC6P09630 AC005326.1-201ENST00000429197 123 ntBASIC4.17□□□□□ -1.74
HOXC6P09630 ATP5JP1-201ENST00000431631 322 ntBASIC4.17□□□□□ -1.74
HOXC6P09630 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXC6P09630 MTND1P30-201ENST00000441241 901 ntBASIC4.17□□□□□ -1.74
HOXC6P09630 RPL7P59-201ENST00000447700 943 ntBASIC4.17□□□□□ -1.74
HOXC6P09630 RPL36AP33-201ENST00000450395 310 ntBASIC4.17□□□□□ -1.74
HOXC6P09630 AC006511.1-201ENST00000470614 315 ntBASIC4.17□□□□□ -1.74
HOXC6P09630 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.17□□□□□ -1.74
HOXC6P09630 AC048346.1-201ENST00000510247 144 ntBASIC4.17□□□□□ -1.74
HOXC6P09630 AC079140.3-201ENST00000511111 550 ntBASIC4.17□□□□□ -1.74
HOXC6P09630 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.17□□□□□ -1.74
HOXC6P09630 RNU6-885P-201ENST00000516607 104 ntBASIC4.17□□□□□ -1.74
HOXC6P09630 SMARCE1P4-201ENST00000523647 241 ntBASIC4.17□□□□□ -1.74
HOXC6P09630 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HOXC6P09630 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HOXC6P09630 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXC6P09630 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.17□□□□□ -1.74
HOXC6P09630 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXC6P09630 AC004217.3-201ENST00000551552 878 ntBASIC4.17□□□□□ -1.74
HOXC6P09630 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.17□□□□□ -1.74
HOXC6P09630 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.17□□□□□ -1.74
HOXC6P09630 MTCYBP22-201ENST00000603788 447 ntBASIC4.17□□□□□ -1.74
HOXC6P09630 AC115621.1-201ENST00000604653 858 ntBASIC4.17□□□□□ -1.74
HOXC6P09630 AL590240.3-201ENST00000621416 943 ntBASIC4.17□□□□□ -1.74
HOXC6P09630 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.17□□□□□ -1.74
HOXC6P09630 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
HOXC6P09630 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.17□□□□□ -1.74
HOXC6P09630 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.17□□□□□ -1.74
HOXC6P09630 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
HOXC6P09630 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HOXC6P09630 AC027514.1-201ENST00000588561 1603 ntBASIC4.17□□□□□ -1.74
HOXC6P09630 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HOXC6P09630 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.17□□□□□ -1.74
HOXC6P09630 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HOXC6P09630 MTND4P34-201ENST00000572715 1371 ntBASIC4.16□□□□□ -1.74
HOXC6P09630 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
HOXC6P09630 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
HOXC6P09630 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HOXC6P09630 RNU6-660P-201ENST00000364566 109 ntBASIC4.16□□□□□ -1.74
HOXC6P09630 RNU6-621P-201ENST00000364752 109 ntBASIC4.16□□□□□ -1.74
HOXC6P09630 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXC6P09630 HLFP1-201ENST00000402375 499 ntBASIC4.16□□□□□ -1.74
HOXC6P09630 AC068533.2-201ENST00000411872 306 ntBASIC4.16□□□□□ -1.74
HOXC6P09630 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXC6P09630 PPIAP17-201ENST00000438507 471 ntBASIC4.16□□□□□ -1.74
HOXC6P09630 USP9YP29-201ENST00000445112 563 ntBASIC4.16□□□□□ -1.74
HOXC6P09630 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXC6P09630 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.16□□□□□ -1.74
HOXC6P09630 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXC6P09630 SNORA59A-201ENST00000459326 152 ntBASIC4.16□□□□□ -1.74
HOXC6P09630 AC015724.1-201ENST00000478577 156 ntBASIC4.16□□□□□ -1.74
HOXC6P09630 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HOXC6P09630 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HOXC6P09630 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HOXC6P09630 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXC6P09630 CBX3P3-201ENST00000508108 532 ntBASIC4.16□□□□□ -1.74
HOXC6P09630 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HOXC6P09630 RPL7L1P13-201ENST00000511702 739 ntBASIC4.16□□□□□ -1.74
HOXC6P09630 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HOXC6P09630 RNA5SP208-201ENST00000516156 78 ntBASIC4.16□□□□□ -1.74
HOXC6P09630 RNY4P37-201ENST00000516225 96 ntBASIC4.16□□□□□ -1.74
HOXC6P09630 SUMO2P20-201ENST00000520803 283 ntBASIC4.16□□□□□ -1.74
HOXC6P09630 OR5AK1P-201ENST00000524837 922 ntBASIC4.16□□□□□ -1.74
HOXC6P09630 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.16□□□□□ -1.74
HOXC6P09630 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
HOXC6P09630 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXC6P09630 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXC6P09630 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXC6P09630 AC090751.1-201ENST00000566966 267 ntBASIC4.16□□□□□ -1.74
HOXC6P09630 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXC6P09630 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXC6P09630 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HOXC6P09630 AC006116.10-201ENST00000591836 581 ntBASIC4.16□□□□□ -1.74
HOXC6P09630 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXC6P09630 NTAN1P1-201ENST00000603150 646 ntBASIC4.16□□□□□ -1.74
HOXC6P09630 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXC6P09630 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.16□□□□□ -1.74
HOXC6P09630 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXC6P09630 AC010678.1-201ENST00000614118 713 ntBASIC4.16□□□□□ -1.74
HOXC6P09630 MIR7973-1-201ENST00000614683 76 ntBASIC4.16□□□□□ -1.74
HOXC6P09630 AC090337.1-201ENST00000579651 2074 ntBASIC4.16□□□□□ -1.74
HOXC6P09630 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HOXC6P09630 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms