Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 RNU6-225P-201ENST00000384613 103 ntBASIC2.85□□□□□ -1.95
COL1A1P02452 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC2.85□□□□□ -1.95
COL1A1P02452 USP9YP7-201ENST00000436723 430 ntBASIC2.85□□□□□ -1.95
COL1A1P02452 USP9YP32-201ENST00000452432 430 ntBASIC2.85□□□□□ -1.95
COL1A1P02452 RNU6-1218P-201ENST00000458990 108 ntBASIC2.85□□□□□ -1.95
COL1A1P02452 RPS27P27-201ENST00000498779 255 ntBASIC2.85□□□□□ -1.95
COL1A1P02452 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.85□□□□□ -1.95
COL1A1P02452 AC073348.1-201ENST00000623002 331 ntBASIC2.85□□□□□ -1.95
COL1A1P02452 PISRT1-201ENST00000626175 531 ntBASIC2.85□□□□□ -1.95
COL1A1P02452 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC2.85□□□□□ -1.95
COL1A1P02452 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
COL1A1P02452 AL139811.1-201ENST00000424779 2299 ntBASIC2.85□□□□□ -1.95
COL1A1P02452 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.85□□□□□ -1.95
COL1A1P02452 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
COL1A1P02452 SYT14P1-202ENST00000600441 1448 ntBASIC2.85□□□□□ -1.95
COL1A1P02452 AL024474.1-201ENST00000404655 591 ntBASIC2.84□□□□□ -1.95
COL1A1P02452 VTA1P1-201ENST00000414044 866 ntBASIC2.84□□□□□ -1.95
COL1A1P02452 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC2.84□□□□□ -1.95
COL1A1P02452 AL049830.2-201ENST00000480072 201 ntBASIC2.84□□□□□ -1.95
COL1A1P02452 RN7SL499P-201ENST00000481141 276 ntBASIC2.84□□□□□ -1.95
COL1A1P02452 CKS1BP2-201ENST00000497342 240 ntBASIC2.84□□□□□ -1.95
COL1A1P02452 IGKV2-36-201ENST00000519999 223 ntBASIC2.84□□□□□ -1.95
COL1A1P02452 RANP3-201ENST00000530970 276 ntBASIC2.84□□□□□ -1.95
COL1A1P02452 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
COL1A1P02452 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.84□□□□□ -1.95
COL1A1P02452 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
COL1A1P02452 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.84□□□□□ -1.95
COL1A1P02452 AC105036.1-201ENST00000566222 271 ntBASIC2.84□□□□□ -1.95
COL1A1P02452 AC006254.3-201ENST00000603353 884 ntBASIC2.84□□□□□ -1.95
COL1A1P02452 ABI1P1-201ENST00000603375 1120 ntBASIC2.84□□□□□ -1.95
COL1A1P02452 AC004696.1-201ENST00000614345 607 ntBASIC2.84□□□□□ -1.95
COL1A1P02452 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.84□□□□□ -1.95
COL1A1P02452 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
COL1A1P02452 AC026634.1-201ENST00000634369 198 ntBASIC2.84□□□□□ -1.95
COL1A1P02452 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
COL1A1P02452 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.84□□□□□ -1.95
COL1A1P02452 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
COL1A1P02452 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
COL1A1P02452 AL161431.1-201ENST00000618966 4205 ntBASIC2.84□□□□□ -1.96
COL1A1P02452 MIR142-201ENST00000384835 87 ntBASIC2.84□□□□□ -1.96
COL1A1P02452 AC092832.1-201ENST00000422934 400 ntBASIC2.84□□□□□ -1.96
COL1A1P02452 AC093084.1-201ENST00000424233 687 ntBASIC2.84□□□□□ -1.96
COL1A1P02452 ARF4P2-201ENST00000430209 526 ntBASIC2.84□□□□□ -1.96
COL1A1P02452 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC2.84□□□□□ -1.96
COL1A1P02452 RPL21P99-201ENST00000480369 423 ntBASIC2.84□□□□□ -1.96
COL1A1P02452 AC108860.1-201ENST00000484521 383 ntBASIC2.84□□□□□ -1.96
COL1A1P02452 AC012170.1-201ENST00000495139 359 ntBASIC2.84□□□□□ -1.96
COL1A1P02452 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC2.84□□□□□ -1.96
COL1A1P02452 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
COL1A1P02452 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.84□□□□□ -1.96
COL1A1P02452 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.84□□□□□ -1.96
COL1A1P02452 AADACP1-206ENST00000561502 1193 ntBASIC2.84□□□□□ -1.96
COL1A1P02452 AC026464.5-201ENST00000562497 722 ntBASIC2.84□□□□□ -1.96
COL1A1P02452 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC2.84□□□□□ -1.96
COL1A1P02452 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC2.84□□□□□ -1.96
COL1A1P02452 VN1R81P-201ENST00000602085 372 ntBASIC2.84□□□□□ -1.96
COL1A1P02452 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.84□□□□□ -1.96
COL1A1P02452 AC103710.3-201ENST00000608157 948 ntBASIC2.84□□□□□ -1.96
COL1A1P02452 AL136981.2-201ENST00000617319 734 ntBASIC2.84□□□□□ -1.96
COL1A1P02452 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.83□□□□□ -1.96
COL1A1P02452 AC104454.1-201ENST00000421341 1401 ntBASIC2.83□□□□□ -1.96
COL1A1P02452 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC2.83□□□□□ -1.96
COL1A1P02452 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.83□□□□□ -1.96
COL1A1P02452 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
COL1A1P02452 AC092326.2-201ENST00000624772 1561 ntBASIC2.83□□□□□ -1.96
COL1A1P02452 AC009487.4-201ENST00000624969 3585 ntBASIC2.83□□□□□ -1.96
COL1A1P02452 RNU6-253P-201ENST00000384730 105 ntBASIC2.83□□□□□ -1.96
COL1A1P02452 MIR1287-201ENST00000408492 90 ntBASIC2.83□□□□□ -1.96
COL1A1P02452 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.83□□□□□ -1.96
COL1A1P02452 SAR1AP4-201ENST00000429225 591 ntBASIC2.83□□□□□ -1.96
COL1A1P02452 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.83□□□□□ -1.96
COL1A1P02452 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.83□□□□□ -1.96
COL1A1P02452 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.83□□□□□ -1.96
COL1A1P02452 GAPDHP39-201ENST00000481866 979 ntBASIC2.83□□□□□ -1.96
COL1A1P02452 RPL9P6-201ENST00000492764 598 ntBASIC2.83□□□□□ -1.96
COL1A1P02452 AL024509.2-201ENST00000493462 493 ntBASIC2.83□□□□□ -1.96
COL1A1P02452 AC107222.1-201ENST00000510899 637 ntBASIC2.83□□□□□ -1.96
COL1A1P02452 AC008716.1-201ENST00000511084 513 ntBASIC2.83□□□□□ -1.96
COL1A1P02452 AP001317.1-201ENST00000531194 960 ntBASIC2.83□□□□□ -1.96
COL1A1P02452 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.83□□□□□ -1.96
COL1A1P02452 AC025281.1-201ENST00000567026 265 ntBASIC2.83□□□□□ -1.96
COL1A1P02452 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.83□□□□□ -1.96
COL1A1P02452 AL160237.3-201ENST00000604114 1013 ntBASIC2.83□□□□□ -1.96
COL1A1P02452 AL713998.2-201ENST00000604538 1198 ntBASIC2.83□□□□□ -1.96
COL1A1P02452 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC2.83□□□□□ -1.96
COL1A1P02452 AL160394.1-201ENST00000624765 724 ntBASIC2.83□□□□□ -1.96
COL1A1P02452 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
COL1A1P02452 AC097714.1-201ENST00000511272 1647 ntBASIC2.82□□□□□ -1.96
COL1A1P02452 AC110792.3-201ENST00000595906 1614 ntBASIC2.82□□□□□ -1.96
COL1A1P02452 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
COL1A1P02452 OR4G2P-202ENST00000641004 1759 ntBASIC2.82□□□□□ -1.96
COL1A1P02452 Y_RNA.466-201ENST00000384294 113 ntBASIC2.82□□□□□ -1.96
COL1A1P02452 SNORA41-201ENST00000384675 132 ntBASIC2.82□□□□□ -1.96
COL1A1P02452 MIR124-3-201ENST00000384866 87 ntBASIC2.82□□□□□ -1.96
COL1A1P02452 AL591416.1-201ENST00000404015 867 ntBASIC2.82□□□□□ -1.96
COL1A1P02452 AL450338.1-201ENST00000407987 512 ntBASIC2.82□□□□□ -1.96
COL1A1P02452 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC2.82□□□□□ -1.96
COL1A1P02452 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.82□□□□□ -1.96
COL1A1P02452 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC2.82□□□□□ -1.96
COL1A1P02452 HMGB1P41-201ENST00000520234 440 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms