Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC021269.2-201ENST00000532318 330 ntBASIC2.41□□□□□ -2.02
TNFP01375 AC123904.3-201ENST00000547218 814 ntBASIC2.41□□□□□ -2.02
TNFP01375 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.41□□□□□ -2.02
TNFP01375 AC116312.1-201ENST00000606841 314 ntBASIC2.41□□□□□ -2.02
TNFP01375 AC107294.1-201ENST00000609524 467 ntBASIC2.41□□□□□ -2.02
TNFP01375 AC139769.3-201ENST00000618383 175 ntBASIC2.41□□□□□ -2.02
TNFP01375 AC022079.2-201ENST00000619739 566 ntBASIC2.41□□□□□ -2.02
TNFP01375 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.41□□□□□ -2.02
TNFP01375 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
TNFP01375 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
TNFP01375 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
TNFP01375 SNORA7.2-201ENST00000364446 145 ntBASIC2.4□□□□□ -2.03
TNFP01375 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.4□□□□□ -2.03
TNFP01375 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
TNFP01375 RPL21P75-201ENST00000396599 483 ntBASIC2.4□□□□□ -2.03
TNFP01375 RPL21P28-201ENST00000401418 483 ntBASIC2.4□□□□□ -2.03
TNFP01375 AL592114.1-201ENST00000403842 483 ntBASIC2.4□□□□□ -2.03
TNFP01375 RNU4-53P-201ENST00000410828 140 ntBASIC2.4□□□□□ -2.03
TNFP01375 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.4□□□□□ -2.03
TNFP01375 SSXP9-201ENST00000417503 292 ntBASIC2.4□□□□□ -2.03
TNFP01375 RFESDP1-201ENST00000422350 461 ntBASIC2.4□□□□□ -2.03
TNFP01375 OOSP1P1-201ENST00000423265 274 ntBASIC2.4□□□□□ -2.03
TNFP01375 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.4□□□□□ -2.03
TNFP01375 SAR1AP4-201ENST00000429225 591 ntBASIC2.4□□□□□ -2.03
TNFP01375 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.4□□□□□ -2.03
TNFP01375 MUPP-201ENST00000438111 566 ntBASIC2.4□□□□□ -2.03
TNFP01375 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.4□□□□□ -2.03
TNFP01375 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC2.4□□□□□ -2.03
TNFP01375 RPL7P52-201ENST00000449200 742 ntBASIC2.4□□□□□ -2.03
TNFP01375 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.4□□□□□ -2.03
TNFP01375 RPL21P39-201ENST00000463605 483 ntBASIC2.4□□□□□ -2.03
TNFP01375 RPL37P6-202ENST00000464216 403 ntBASIC2.4□□□□□ -2.03
TNFP01375 AC011979.1-201ENST00000472300 483 ntBASIC2.4□□□□□ -2.03
TNFP01375 RPL21P93-201ENST00000480465 489 ntBASIC2.4□□□□□ -2.03
TNFP01375 AC233702.1-201ENST00000482905 502 ntBASIC2.4□□□□□ -2.03
TNFP01375 AC087190.1-201ENST00000484462 480 ntBASIC2.4□□□□□ -2.03
TNFP01375 AC093591.1-201ENST00000491435 481 ntBASIC2.4□□□□□ -2.03
TNFP01375 RPL21P16-201ENST00000495531 483 ntBASIC2.4□□□□□ -2.03
TNFP01375 AC234781.5-201ENST00000508429 271 ntBASIC2.4□□□□□ -2.03
TNFP01375 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.4□□□□□ -2.03
TNFP01375 RN7SKP234-201ENST00000517173 224 ntBASIC2.4□□□□□ -2.03
TNFP01375 RNU6-711P-201ENST00000517255 106 ntBASIC2.4□□□□□ -2.03
TNFP01375 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.4□□□□□ -2.03
TNFP01375 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.4□□□□□ -2.03
TNFP01375 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.4□□□□□ -2.03
TNFP01375 AC023043.3-201ENST00000593113 385 ntBASIC2.4□□□□□ -2.03
TNFP01375 BX664608.1-201ENST00000610519 487 ntBASIC2.4□□□□□ -2.03
TNFP01375 AC002076.2-201ENST00000617362 122 ntBASIC2.4□□□□□ -2.03
TNFP01375 RNF6P1-201ENST00000444889 1784 ntBASIC2.4□□□□□ -2.03
TNFP01375 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
TNFP01375 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
TNFP01375 AC087565.3-202ENST00000642085 1603 ntBASIC2.39□□□□□ -2.03
TNFP01375 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
TNFP01375 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC2.39□□□□□ -2.03
TNFP01375 MIR592-201ENST00000384959 97 ntBASIC2.39□□□□□ -2.03
TNFP01375 EI24P1-201ENST00000416584 867 ntBASIC2.39□□□□□ -2.03
TNFP01375 HIGD1AP2-201ENST00000446367 280 ntBASIC2.39□□□□□ -2.03
TNFP01375 SNORD59.2-201ENST00000516873 68 ntBASIC2.39□□□□□ -2.03
TNFP01375 SETP2-201ENST00000553886 926 ntBASIC2.39□□□□□ -2.03
TNFP01375 AL359198.2-201ENST00000611836 194 ntBASIC2.39□□□□□ -2.03
TNFP01375 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.39□□□□□ -2.03
TNFP01375 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
TNFP01375 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
TNFP01375 AP002907.1-201ENST00000606361 1430 ntBASIC2.39□□□□□ -2.03
TNFP01375 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
TNFP01375 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
TNFP01375 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
TNFP01375 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.38□□□□□ -2.03
TNFP01375 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.38□□□□□ -2.03
TNFP01375 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
TNFP01375 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
TNFP01375 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
TNFP01375 RN7SKP284-201ENST00000411002 343 ntBASIC2.38□□□□□ -2.03
TNFP01375 AC004022.2-201ENST00000413824 193 ntBASIC2.38□□□□□ -2.03
TNFP01375 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.38□□□□□ -2.03
TNFP01375 RPL17P49-201ENST00000443728 411 ntBASIC2.38□□□□□ -2.03
TNFP01375 NF1P3-201ENST00000457709 450 ntBASIC2.38□□□□□ -2.03
TNFP01375 OR5H5P-201ENST00000503164 928 ntBASIC2.38□□□□□ -2.03
TNFP01375 AC098799.2-201ENST00000509466 868 ntBASIC2.38□□□□□ -2.03
TNFP01375 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
TNFP01375 OR6C73P-201ENST00000546432 358 ntBASIC2.38□□□□□ -2.03
TNFP01375 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.38□□□□□ -2.03
TNFP01375 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.38□□□□□ -2.03
TNFP01375 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC2.38□□□□□ -2.03
TNFP01375 AP003117.1-201ENST00000602771 554 ntBASIC2.38□□□□□ -2.03
TNFP01375 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC2.38□□□□□ -2.03
TNFP01375 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.38□□□□□ -2.03
TNFP01375 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
TNFP01375 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.37□□□□□ -2.03
TNFP01375 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
TNFP01375 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
TNFP01375 METTL21EP-201ENST00000298105 713 ntBASIC2.37□□□□□ -2.03
TNFP01375 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.37□□□□□ -2.03
TNFP01375 SNORD114-30-201ENST00000364448 72 ntBASIC2.37□□□□□ -2.03
TNFP01375 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.37□□□□□ -2.03
TNFP01375 SNORA70B-201ENST00000384210 135 ntBASIC2.37□□□□□ -2.03
TNFP01375 RPL19P1-201ENST00000411635 428 ntBASIC2.37□□□□□ -2.03
TNFP01375 MTCO2P17-201ENST00000424336 677 ntBASIC2.37□□□□□ -2.03
TNFP01375 AC093716.1-201ENST00000435923 377 ntBASIC2.37□□□□□ -2.03
TNFP01375 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms