Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.95□□□□□ -1.78
GGPS1O95749 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.95□□□□□ -1.78
GGPS1O95749 RPL39P6-201ENST00000448289 150 ntBASIC3.95□□□□□ -1.78
GGPS1O95749 AL009048.1-201ENST00000450437 298 ntBASIC3.95□□□□□ -1.78
GGPS1O95749 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.95□□□□□ -1.78
GGPS1O95749 HMGN2P7-201ENST00000456186 273 ntBASIC3.95□□□□□ -1.78
GGPS1O95749 BX510359.1-201ENST00000456973 237 ntBASIC3.95□□□□□ -1.78
GGPS1O95749 RPL32P34-201ENST00000486380 400 ntBASIC3.95□□□□□ -1.78
GGPS1O95749 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.95□□□□□ -1.78
GGPS1O95749 AC026427.2-201ENST00000506228 536 ntBASIC3.95□□□□□ -1.78
GGPS1O95749 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.95□□□□□ -1.78
GGPS1O95749 TPT1P8-201ENST00000510120 555 ntBASIC3.95□□□□□ -1.78
GGPS1O95749 NDUFB4P9-201ENST00000511646 388 ntBASIC3.95□□□□□ -1.78
GGPS1O95749 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.95□□□□□ -1.78
GGPS1O95749 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.95□□□□□ -1.78
GGPS1O95749 SLC2A13P1-201ENST00000531560 322 ntBASIC3.95□□□□□ -1.78
GGPS1O95749 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.95□□□□□ -1.78
GGPS1O95749 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.95□□□□□ -1.78
GGPS1O95749 AC245036.5-201ENST00000596330 847 ntBASIC3.95□□□□□ -1.78
GGPS1O95749 BNIP3P26-201ENST00000600827 554 ntBASIC3.95□□□□□ -1.78
GGPS1O95749 MTND3P19-201ENST00000603825 345 ntBASIC3.95□□□□□ -1.78
GGPS1O95749 AC069304.2-201ENST00000605154 435 ntBASIC3.95□□□□□ -1.78
GGPS1O95749 AC106052.1-201ENST00000608029 497 ntBASIC3.95□□□□□ -1.78
GGPS1O95749 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
GGPS1O95749 MIR8058-201ENST00000615737 89 ntBASIC3.95□□□□□ -1.78
GGPS1O95749 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
GGPS1O95749 MIR4278-201ENST00000636094 69 ntBASIC3.95□□□□□ -1.78
GGPS1O95749 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
GGPS1O95749 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
GGPS1O95749 OTUD4P1-201ENST00000237841 3067 ntBASIC3.95□□□□□ -1.78
GGPS1O95749 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
GGPS1O95749 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
GGPS1O95749 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
GGPS1O95749 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
GGPS1O95749 HSPA8P1-201ENST00000425843 1833 ntBASIC3.94□□□□□ -1.78
GGPS1O95749 SNORA51.2-201ENST00000364595 132 ntBASIC3.94□□□□□ -1.78
GGPS1O95749 MIR483-201ENST00000385070 76 ntBASIC3.94□□□□□ -1.78
GGPS1O95749 SNRPEP2-201ENST00000397592 279 ntBASIC3.94□□□□□ -1.78
GGPS1O95749 RNU2-37P-201ENST00000410695 177 ntBASIC3.94□□□□□ -1.78
GGPS1O95749 AC068533.2-201ENST00000411872 306 ntBASIC3.94□□□□□ -1.78
GGPS1O95749 AC017079.2-201ENST00000416102 485 ntBASIC3.94□□□□□ -1.78
GGPS1O95749 AC012065.2-201ENST00000421295 375 ntBASIC3.94□□□□□ -1.78
GGPS1O95749 AC092427.1-201ENST00000439177 601 ntBASIC3.94□□□□□ -1.78
GGPS1O95749 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.94□□□□□ -1.78
GGPS1O95749 RPS29P31-201ENST00000446147 164 ntBASIC3.94□□□□□ -1.78
GGPS1O95749 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.94□□□□□ -1.78
GGPS1O95749 RPS24P6-201ENST00000452670 400 ntBASIC3.94□□□□□ -1.78
GGPS1O95749 USP9YP34-201ENST00000453983 808 ntBASIC3.94□□□□□ -1.78
GGPS1O95749 AL445669.2-201ENST00000454425 421 ntBASIC3.94□□□□□ -1.78
GGPS1O95749 AC092155.2-201ENST00000454675 477 ntBASIC3.94□□□□□ -1.78
GGPS1O95749 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.94□□□□□ -1.78
GGPS1O95749 AC005410.1-202ENST00000460347 485 ntBASIC3.94□□□□□ -1.78
GGPS1O95749 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.94□□□□□ -1.78
GGPS1O95749 RPS15AP17-201ENST00000470598 390 ntBASIC3.94□□□□□ -1.78
GGPS1O95749 TMED11P-201ENST00000479478 690 ntBASIC3.94□□□□□ -1.78
GGPS1O95749 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.94□□□□□ -1.78
GGPS1O95749 RNU2-27P-201ENST00000516185 142 ntBASIC3.94□□□□□ -1.78
GGPS1O95749 SNORA74D-201ENST00000516404 141 ntBASIC3.94□□□□□ -1.78
GGPS1O95749 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.94□□□□□ -1.78
GGPS1O95749 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.94□□□□□ -1.78
GGPS1O95749 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.94□□□□□ -1.78
GGPS1O95749 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.94□□□□□ -1.78
GGPS1O95749 EEF1B2P4-201ENST00000551398 348 ntBASIC3.94□□□□□ -1.78
GGPS1O95749 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.94□□□□□ -1.78
GGPS1O95749 AL132857.1-201ENST00000555180 708 ntBASIC3.94□□□□□ -1.78
GGPS1O95749 AC023813.2-201ENST00000564321 469 ntBASIC3.94□□□□□ -1.78
GGPS1O95749 AP001269.3-201ENST00000588718 329 ntBASIC3.94□□□□□ -1.78
GGPS1O95749 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.94□□□□□ -1.78
GGPS1O95749 AC128687.1-201ENST00000605304 619 ntBASIC3.94□□□□□ -1.78
GGPS1O95749 AC006963.1-201ENST00000624003 1052 ntBASIC3.94□□□□□ -1.78
GGPS1O95749 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.94□□□□□ -1.78
GGPS1O95749 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.94□□□□□ -1.78
GGPS1O95749 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
GGPS1O95749 AP001350.1-201ENST00000601906 1524 ntBASIC3.94□□□□□ -1.78
GGPS1O95749 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
GGPS1O95749 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.94□□□□□ -1.78
GGPS1O95749 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
GGPS1O95749 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
GGPS1O95749 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.93□□□□□ -1.78
GGPS1O95749 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
GGPS1O95749 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.93□□□□□ -1.78
GGPS1O95749 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
GGPS1O95749 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
GGPS1O95749 AC244517.1-201ENST00000606030 2086 ntBASIC3.93□□□□□ -1.78
GGPS1O95749 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
GGPS1O95749 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
GGPS1O95749 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
GGPS1O95749 GABPAP-201ENST00000419271 1356 ntBASIC3.93□□□□□ -1.78
GGPS1O95749 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
GGPS1O95749 RNU6-600P-201ENST00000362524 99 ntBASIC3.93□□□□□ -1.78
GGPS1O95749 RNU6-283P-201ENST00000364788 107 ntBASIC3.93□□□□□ -1.78
GGPS1O95749 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
GGPS1O95749 Z98941.1-201ENST00000407764 100 ntBASIC3.93□□□□□ -1.78
GGPS1O95749 U3.39-201ENST00000408569 239 ntBASIC3.93□□□□□ -1.78
GGPS1O95749 RNU6-584P-201ENST00000410350 95 ntBASIC3.93□□□□□ -1.78
GGPS1O95749 BX323014.1-201ENST00000412876 237 ntBASIC3.93□□□□□ -1.78
GGPS1O95749 OR1AA1P-201ENST00000419597 916 ntBASIC3.93□□□□□ -1.78
GGPS1O95749 AC006989.1-201ENST00000427212 131 ntBASIC3.93□□□□□ -1.78
GGPS1O95749 USP9YP11-201ENST00000427537 717 ntBASIC3.93□□□□□ -1.78
GGPS1O95749 AC017083.1-201ENST00000428093 483 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms