Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 AL023284.1-201ENST00000403956 276 ntBASIC2.23□□□□□ -2.05
SNRNP200O75643 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC2.23□□□□□ -2.05
SNRNP200O75643 HMGB1P11-201ENST00000413899 637 ntBASIC2.23□□□□□ -2.05
SNRNP200O75643 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC2.23□□□□□ -2.05
SNRNP200O75643 SNORA31.15-201ENST00000516771 132 ntBASIC2.23□□□□□ -2.05
SNRNP200O75643 OR4R2P-201ENST00000530815 597 ntBASIC2.23□□□□□ -2.05
SNRNP200O75643 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.23□□□□□ -2.05
SNRNP200O75643 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.23□□□□□ -2.05
SNRNP200O75643 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.23□□□□□ -2.05
SNRNP200O75643 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.23□□□□□ -2.05
SNRNP200O75643 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.23□□□□□ -2.05
SNRNP200O75643 MIR4506-201ENST00000584693 77 ntBASIC2.23□□□□□ -2.05
SNRNP200O75643 AC010928.3-201ENST00000587712 541 ntBASIC2.23□□□□□ -2.05
SNRNP200O75643 AC012213.4-201ENST00000606457 354 ntBASIC2.23□□□□□ -2.05
SNRNP200O75643 AC090425.2-201ENST00000608818 501 ntBASIC2.23□□□□□ -2.05
SNRNP200O75643 CR589904.2-201ENST00000612533 440 ntBASIC2.23□□□□□ -2.05
SNRNP200O75643 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.23□□□□□ -2.05
SNRNP200O75643 AC145207.9-201ENST00000623802 325 ntBASIC2.23□□□□□ -2.05
SNRNP200O75643 AC024023.1-201ENST00000624530 922 ntBASIC2.23□□□□□ -2.05
SNRNP200O75643 AL160394.1-201ENST00000624765 724 ntBASIC2.23□□□□□ -2.05
SNRNP200O75643 CYP3A51P-201ENST00000633513 256 ntBASIC2.23□□□□□ -2.05
SNRNP200O75643 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
SNRNP200O75643 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
SNRNP200O75643 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
SNRNP200O75643 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.22□□□□□ -2.05
SNRNP200O75643 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.22□□□□□ -2.05
SNRNP200O75643 NACA3P-201ENST00000359690 648 ntBASIC2.22□□□□□ -2.05
SNRNP200O75643 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.22□□□□□ -2.05
SNRNP200O75643 Z99127.2-201ENST00000441426 334 ntBASIC2.22□□□□□ -2.05
SNRNP200O75643 MIR4474-201ENST00000579189 78 ntBASIC2.22□□□□□ -2.05
SNRNP200O75643 AC022069.1-201ENST00000582910 658 ntBASIC2.22□□□□□ -2.05
SNRNP200O75643 AC011468.4-201ENST00000603942 409 ntBASIC2.22□□□□□ -2.05
SNRNP200O75643 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.22□□□□□ -2.05
SNRNP200O75643 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.22□□□□□ -2.05
SNRNP200O75643 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.22□□□□□ -2.05
SNRNP200O75643 RFC1-217ENST00000639695 867 ntTSL 5 BASIC2.22□□□□□ -2.05
SNRNP200O75643 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.22□□□□□ -2.05
SNRNP200O75643 Z99496.1-201ENST00000469424 1477 ntBASIC2.21□□□□□ -2.05
SNRNP200O75643 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.05
SNRNP200O75643 RN7SKP192-201ENST00000411291 327 ntBASIC2.21□□□□□ -2.06
SNRNP200O75643 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC2.21□□□□□ -2.06
SNRNP200O75643 RPL21P112-201ENST00000434403 463 ntBASIC2.21□□□□□ -2.06
SNRNP200O75643 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC2.21□□□□□ -2.06
SNRNP200O75643 AC069277.2-201ENST00000454211 432 ntBASIC2.21□□□□□ -2.06
SNRNP200O75643 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.21□□□□□ -2.06
SNRNP200O75643 AC105036.1-201ENST00000566222 271 ntBASIC2.21□□□□□ -2.06
SNRNP200O75643 AC105137.2-201ENST00000569073 466 ntBASIC2.21□□□□□ -2.06
SNRNP200O75643 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.21□□□□□ -2.06
SNRNP200O75643 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
SNRNP200O75643 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
SNRNP200O75643 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SNRNP200O75643 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
SNRNP200O75643 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.21□□□□□ -2.06
SNRNP200O75643 MTCO1P43-201ENST00000431831 488 ntBASIC2.21□□□□□ -2.06
SNRNP200O75643 EEF1B2P7-201ENST00000451177 676 ntBASIC2.21□□□□□ -2.06
SNRNP200O75643 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.21□□□□□ -2.06
SNRNP200O75643 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.21□□□□□ -2.06
SNRNP200O75643 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.21□□□□□ -2.06
SNRNP200O75643 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.21□□□□□ -2.06
SNRNP200O75643 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC2.21□□□□□ -2.06
SNRNP200O75643 AC116312.1-201ENST00000606841 314 ntBASIC2.21□□□□□ -2.06
SNRNP200O75643 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SNRNP200O75643 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
SNRNP200O75643 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SNRNP200O75643 RN7SKP32-201ENST00000410167 303 ntBASIC2.2□□□□□ -2.06
SNRNP200O75643 RNU4-53P-201ENST00000410828 140 ntBASIC2.2□□□□□ -2.06
SNRNP200O75643 AL139156.1-201ENST00000412785 841 ntBASIC2.2□□□□□ -2.06
SNRNP200O75643 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.2□□□□□ -2.06
SNRNP200O75643 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.2□□□□□ -2.06
SNRNP200O75643 HMGB1P12-201ENST00000438594 598 ntBASIC2.2□□□□□ -2.06
SNRNP200O75643 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.2□□□□□ -2.06
SNRNP200O75643 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC2.2□□□□□ -2.06
SNRNP200O75643 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC2.2□□□□□ -2.06
SNRNP200O75643 AC010198.2-201ENST00000550612 259 ntBASIC2.2□□□□□ -2.06
SNRNP200O75643 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC2.2□□□□□ -2.06
SNRNP200O75643 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.2□□□□□ -2.06
SNRNP200O75643 AC019131.2-201ENST00000609071 870 ntBASIC2.2□□□□□ -2.06
SNRNP200O75643 AC010297.1-201ENST00000623948 149 ntBASIC2.2□□□□□ -2.06
SNRNP200O75643 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
SNRNP200O75643 ZNF658B-202ENST00000615961 3375 ntBASIC2.2□□□□□ -2.06
SNRNP200O75643 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SNRNP200O75643 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.2□□□□□ -2.06
SNRNP200O75643 RNU6-233P-201ENST00000410845 141 ntBASIC2.2□□□□□ -2.06
SNRNP200O75643 AL135786.1-201ENST00000415892 214 ntBASIC2.2□□□□□ -2.06
SNRNP200O75643 AC093392.2-201ENST00000450682 337 ntBASIC2.2□□□□□ -2.06
SNRNP200O75643 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
SNRNP200O75643 RNU6-826P-201ENST00000516827 104 ntBASIC2.2□□□□□ -2.06
SNRNP200O75643 AC078814.3-201ENST00000553036 491 ntBASIC2.2□□□□□ -2.06
SNRNP200O75643 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC2.2□□□□□ -2.06
SNRNP200O75643 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.2□□□□□ -2.06
SNRNP200O75643 RPL12P50-201ENST00000603116 116 ntBASIC2.2□□□□□ -2.06
SNRNP200O75643 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
SNRNP200O75643 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SNRNP200O75643 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC2.2□□□□□ -2.06
SNRNP200O75643 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.19□□□□□ -2.06
SNRNP200O75643 AL137014.1-201ENST00000420490 1226 ntBASIC2.19□□□□□ -2.06
SNRNP200O75643 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.19□□□□□ -2.06
SNRNP200O75643 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.19□□□□□ -2.06
SNRNP200O75643 ARPC3P2-201ENST00000457786 533 ntBASIC2.19□□□□□ -2.06
SNRNP200O75643 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms