Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LRCH4O75427 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
LRCH4O75427 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
LRCH4O75427 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.57□□□□□ -1.84
LRCH4O75427 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LRCH4O75427 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LRCH4O75427 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LRCH4O75427 RNU5D-1-201ENST00000363299 116 ntBASIC3.57□□□□□ -1.84
LRCH4O75427 SNORD116.1-201ENST00000365628 92 ntBASIC3.57□□□□□ -1.84
LRCH4O75427 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LRCH4O75427 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.57□□□□□ -1.84
LRCH4O75427 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LRCH4O75427 SNORA9-201ENST00000384215 133 ntBASIC3.57□□□□□ -1.84
LRCH4O75427 SNORD17-201ENST00000390930 237 ntBASIC3.57□□□□□ -1.84
LRCH4O75427 MTND4P13-201ENST00000402078 1023 ntBASIC3.57□□□□□ -1.84
LRCH4O75427 SSXP10-201ENST00000402595 565 ntBASIC3.57□□□□□ -1.84
LRCH4O75427 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.57□□□□□ -1.84
LRCH4O75427 RPL23AP47-201ENST00000408017 460 ntBASIC3.57□□□□□ -1.84
LRCH4O75427 RN7SKP111-201ENST00000410349 271 ntBASIC3.57□□□□□ -1.84
LRCH4O75427 AC069218.2-201ENST00000411665 344 ntBASIC3.57□□□□□ -1.84
LRCH4O75427 RPS24P7-201ENST00000416921 246 ntBASIC3.57□□□□□ -1.84
LRCH4O75427 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.57□□□□□ -1.84
LRCH4O75427 MTCO3P1-205ENST00000422088 832 ntBASIC3.57□□□□□ -1.84
LRCH4O75427 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.57□□□□□ -1.84
LRCH4O75427 AC091390.3-201ENST00000426478 338 ntBASIC3.57□□□□□ -1.84
LRCH4O75427 RPL23AP82-202ENST00000427528 469 ntBASIC3.57□□□□□ -1.84
LRCH4O75427 USP9YP11-201ENST00000427537 717 ntBASIC3.57□□□□□ -1.84
LRCH4O75427 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.57□□□□□ -1.84
LRCH4O75427 RPL23AP76-201ENST00000441860 458 ntBASIC3.57□□□□□ -1.84
LRCH4O75427 RPL21P23-201ENST00000446654 460 ntBASIC3.57□□□□□ -1.84
LRCH4O75427 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.57□□□□□ -1.84
LRCH4O75427 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.57□□□□□ -1.84
LRCH4O75427 RPS20P32-201ENST00000456044 356 ntBASIC3.57□□□□□ -1.84
LRCH4O75427 AC004801.2-202ENST00000463559 283 ntBASIC3.57□□□□□ -1.84
LRCH4O75427 CENPBD1P1-201ENST00000464061 469 ntBASIC3.57□□□□□ -1.84
LRCH4O75427 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.57□□□□□ -1.84
LRCH4O75427 AC025518.1-201ENST00000479856 347 ntBASIC3.57□□□□□ -1.84
LRCH4O75427 RPL32P34-201ENST00000486380 400 ntBASIC3.57□□□□□ -1.84
LRCH4O75427 AC078817.1-201ENST00000492623 435 ntBASIC3.57□□□□□ -1.84
LRCH4O75427 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.57□□□□□ -1.84
LRCH4O75427 AC026427.2-201ENST00000506228 536 ntBASIC3.57□□□□□ -1.84
LRCH4O75427 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.57□□□□□ -1.84
LRCH4O75427 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.57□□□□□ -1.84
LRCH4O75427 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LRCH4O75427 SNORA74D-201ENST00000516404 141 ntBASIC3.57□□□□□ -1.84
LRCH4O75427 RN7SKP277-201ENST00000516895 283 ntBASIC3.57□□□□□ -1.84
LRCH4O75427 RNU6-1261P-201ENST00000517194 104 ntBASIC3.57□□□□□ -1.84
LRCH4O75427 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.57□□□□□ -1.84
LRCH4O75427 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LRCH4O75427 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.57□□□□□ -1.84
LRCH4O75427 AC011602.1-201ENST00000546484 331 ntBASIC3.57□□□□□ -1.84
LRCH4O75427 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LRCH4O75427 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.57□□□□□ -1.84
LRCH4O75427 AC090888.2-201ENST00000559765 1144 ntBASIC3.57□□□□□ -1.84
LRCH4O75427 AC109315.1-201ENST00000584143 1347 ntBASIC3.57□□□□□ -1.84
LRCH4O75427 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.57□□□□□ -1.84
LRCH4O75427 AC113368.1-201ENST00000603736 382 ntBASIC3.57□□□□□ -1.84
LRCH4O75427 HSPE1P14-201ENST00000605812 302 ntBASIC3.57□□□□□ -1.84
LRCH4O75427 AC107952.2-201ENST00000606048 486 ntBASIC3.57□□□□□ -1.84
LRCH4O75427 AC091946.2-201ENST00000606105 291 ntBASIC3.57□□□□□ -1.84
LRCH4O75427 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.57□□□□□ -1.84
LRCH4O75427 AC004908.3-201ENST00000610248 625 ntBASIC3.57□□□□□ -1.84
LRCH4O75427 AL592295.2-201ENST00000612578 206 ntBASIC3.57□□□□□ -1.84
LRCH4O75427 AC005332.6-201ENST00000613178 446 ntBASIC3.57□□□□□ -1.84
LRCH4O75427 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.57□□□□□ -1.84
LRCH4O75427 AC013470.4-201ENST00000619978 986 ntBASIC3.57□□□□□ -1.84
LRCH4O75427 AP002791.1-201ENST00000623291 381 ntBASIC3.57□□□□□ -1.84
LRCH4O75427 AC006065.5-201ENST00000623427 349 ntBASIC3.57□□□□□ -1.84
LRCH4O75427 MIR4496-201ENST00000635896 61 ntBASIC3.57□□□□□ -1.84
LRCH4O75427 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LRCH4O75427 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.57□□□□□ -1.84
LRCH4O75427 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
LRCH4O75427 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
LRCH4O75427 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
LRCH4O75427 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.56□□□□□ -1.84
LRCH4O75427 AL356274.2-201ENST00000624379 3752 ntBASIC3.56□□□□□ -1.84
LRCH4O75427 USP8P1-201ENST00000494673 3183 ntBASIC3.56□□□□□ -1.84
LRCH4O75427 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
LRCH4O75427 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
LRCH4O75427 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
LRCH4O75427 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.56□□□□□ -1.84
LRCH4O75427 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
LRCH4O75427 GABPAP-201ENST00000419271 1356 ntBASIC3.56□□□□□ -1.84
LRCH4O75427 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
LRCH4O75427 RNU4-35P-201ENST00000362588 141 ntBASIC3.56□□□□□ -1.84
LRCH4O75427 RNA5SP197-201ENST00000363357 119 ntBASIC3.56□□□□□ -1.84
LRCH4O75427 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.56□□□□□ -1.84
LRCH4O75427 Y_RNA.465-201ENST00000384293 102 ntBASIC3.56□□□□□ -1.84
LRCH4O75427 MIR218-2-201ENST00000385006 110 ntBASIC3.56□□□□□ -1.84
LRCH4O75427 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
LRCH4O75427 RNU6-328P-201ENST00000390887 106 ntBASIC3.56□□□□□ -1.84
LRCH4O75427 PTMAP5-201ENST00000393073 333 ntBASIC3.56□□□□□ -1.84
LRCH4O75427 AL590084.1-201ENST00000407885 387 ntBASIC3.56□□□□□ -1.84
LRCH4O75427 AL133384.1-201ENST00000412744 351 ntBASIC3.56□□□□□ -1.84
LRCH4O75427 RPS7P15-201ENST00000415804 584 ntBASIC3.56□□□□□ -1.84
LRCH4O75427 AL513174.1-201ENST00000423182 629 ntBASIC3.56□□□□□ -1.84
LRCH4O75427 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.56□□□□□ -1.84
LRCH4O75427 AC073063.1-201ENST00000434352 607 ntBASIC3.56□□□□□ -1.84
LRCH4O75427 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.56□□□□□ -1.84
LRCH4O75427 AC092641.1-201ENST00000440229 772 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms