Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CHMP2AO43633 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.21□□□□□ -1.9
CHMP2AO43633 MTND2P3-201ENST00000452458 470 ntBASIC3.21□□□□□ -1.9
CHMP2AO43633 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.21□□□□□ -1.9
CHMP2AO43633 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CHMP2AO43633 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.21□□□□□ -1.9
CHMP2AO43633 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.21□□□□□ -1.9
CHMP2AO43633 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CHMP2AO43633 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.21□□□□□ -1.9
CHMP2AO43633 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.21□□□□□ -1.9
CHMP2AO43633 HIGD1AP13-201ENST00000509878 289 ntBASIC3.21□□□□□ -1.9
CHMP2AO43633 AC091826.1-201ENST00000514065 313 ntBASIC3.21□□□□□ -1.9
CHMP2AO43633 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.21□□□□□ -1.9
CHMP2AO43633 RN7SKP43-201ENST00000516173 320 ntBASIC3.21□□□□□ -1.9
CHMP2AO43633 RNA5SP468-201ENST00000516782 93 ntBASIC3.21□□□□□ -1.9
CHMP2AO43633 AC019227.1-201ENST00000526902 510 ntBASIC3.21□□□□□ -1.9
CHMP2AO43633 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CHMP2AO43633 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.21□□□□□ -1.9
CHMP2AO43633 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.21□□□□□ -1.9
CHMP2AO43633 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.21□□□□□ -1.9
CHMP2AO43633 AC027104.1-201ENST00000563702 681 ntBASIC3.21□□□□□ -1.9
CHMP2AO43633 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.21□□□□□ -1.9
CHMP2AO43633 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.21□□□□□ -1.9
CHMP2AO43633 AC068831.7-201ENST00000616954 363 ntBASIC3.21□□□□□ -1.9
CHMP2AO43633 AC046144.1-201ENST00000478559 1853 ntBASIC3.21□□□□□ -1.9
CHMP2AO43633 AC093831.2-201ENST00000624393 3427 ntBASIC3.21□□□□□ -1.9
CHMP2AO43633 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.21□□□□□ -1.9
CHMP2AO43633 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CHMP2AO43633 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CHMP2AO43633 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CHMP2AO43633 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CHMP2AO43633 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CHMP2AO43633 RNU6-1005P-201ENST00000384519 107 ntBASIC3.2□□□□□ -1.9
CHMP2AO43633 SFR1P1-201ENST00000403720 688 ntBASIC3.2□□□□□ -1.9
CHMP2AO43633 HMGB3P31-201ENST00000413333 595 ntBASIC3.2□□□□□ -1.9
CHMP2AO43633 ARL2BPP3-201ENST00000421226 480 ntBASIC3.2□□□□□ -1.9
CHMP2AO43633 HSPE1P1-201ENST00000421494 318 ntBASIC3.2□□□□□ -1.9
CHMP2AO43633 MTND4P24-201ENST00000424002 397 ntBASIC3.2□□□□□ -1.9
CHMP2AO43633 AC005189.1-201ENST00000431286 310 ntBASIC3.2□□□□□ -1.9
CHMP2AO43633 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.2□□□□□ -1.9
CHMP2AO43633 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.2□□□□□ -1.9
CHMP2AO43633 RPL7P5-201ENST00000471472 736 ntBASIC3.2□□□□□ -1.9
CHMP2AO43633 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CHMP2AO43633 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.2□□□□□ -1.9
CHMP2AO43633 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.2□□□□□ -1.9
CHMP2AO43633 AC087481.2-201ENST00000565492 330 ntBASIC3.2□□□□□ -1.9
CHMP2AO43633 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.2□□□□□ -1.9
CHMP2AO43633 AC012182.1-201ENST00000570133 895 ntBASIC3.2□□□□□ -1.9
CHMP2AO43633 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.2□□□□□ -1.9
CHMP2AO43633 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
CHMP2AO43633 AC103881.1-201ENST00000603476 538 ntBASIC3.2□□□□□ -1.9
CHMP2AO43633 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.2□□□□□ -1.9
CHMP2AO43633 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.2□□□□□ -1.9
CHMP2AO43633 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.2□□□□□ -1.9
CHMP2AO43633 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.2□□□□□ -1.9
CHMP2AO43633 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CHMP2AO43633 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.19□□□□□ -1.9
CHMP2AO43633 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CHMP2AO43633 RNA5SP258-201ENST00000362750 119 ntBASIC3.19□□□□□ -1.9
CHMP2AO43633 RNU6-989P-201ENST00000362756 107 ntBASIC3.19□□□□□ -1.9
CHMP2AO43633 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.19□□□□□ -1.9
CHMP2AO43633 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CHMP2AO43633 RN7SKP58-201ENST00000411010 305 ntBASIC3.19□□□□□ -1.9
CHMP2AO43633 RSL24D1P8-201ENST00000434442 492 ntBASIC3.19□□□□□ -1.9
CHMP2AO43633 AC112653.1-201ENST00000443851 386 ntBASIC3.19□□□□□ -1.9
CHMP2AO43633 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.19□□□□□ -1.9
CHMP2AO43633 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.19□□□□□ -1.9
CHMP2AO43633 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.19□□□□□ -1.9
CHMP2AO43633 TPRKBP1-201ENST00000456243 481 ntBASIC3.19□□□□□ -1.9
CHMP2AO43633 snoU13.4-201ENST00000458916 104 ntBASIC3.19□□□□□ -1.9
CHMP2AO43633 AC091179.1-201ENST00000461606 579 ntBASIC3.19□□□□□ -1.9
CHMP2AO43633 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.19□□□□□ -1.9
CHMP2AO43633 HESX1-202ENST00000473921 757 ntTSL 5 BASIC3.19□□□□□ -1.9
CHMP2AO43633 RPS27P23-201ENST00000487608 251 ntBASIC3.19□□□□□ -1.9
CHMP2AO43633 AP001025.2-201ENST00000490908 477 ntBASIC3.19□□□□□ -1.9
CHMP2AO43633 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.19□□□□□ -1.9
CHMP2AO43633 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC3.19□□□□□ -1.9
CHMP2AO43633 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.19□□□□□ -1.9
CHMP2AO43633 RNA5SP367-201ENST00000516557 118 ntBASIC3.19□□□□□ -1.9
CHMP2AO43633 SCARNA13-201ENST00000516672 275 ntBASIC3.19□□□□□ -1.9
CHMP2AO43633 RNU6-711P-201ENST00000517255 106 ntBASIC3.19□□□□□ -1.9
CHMP2AO43633 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.19□□□□□ -1.9
CHMP2AO43633 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.19□□□□□ -1.9
CHMP2AO43633 AP003385.6-201ENST00000531603 374 ntBASIC3.19□□□□□ -1.9
CHMP2AO43633 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.19□□□□□ -1.9
CHMP2AO43633 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.19□□□□□ -1.9
CHMP2AO43633 CKS1BP1-201ENST00000555221 240 ntBASIC3.19□□□□□ -1.9
CHMP2AO43633 AC034105.3-201ENST00000565294 442 ntBASIC3.19□□□□□ -1.9
CHMP2AO43633 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.19□□□□□ -1.9
CHMP2AO43633 VN1R90P-201ENST00000595717 726 ntBASIC3.19□□□□□ -1.9
CHMP2AO43633 AC004832.5-201ENST00000608677 401 ntBASIC3.19□□□□□ -1.9
CHMP2AO43633 AL110115.1-201ENST00000614396 364 ntBASIC3.19□□□□□ -1.9
CHMP2AO43633 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CHMP2AO43633 AC006111.3-201ENST00000622137 383 ntBASIC3.19□□□□□ -1.9
CHMP2AO43633 AC092608.3-201ENST00000625017 386 ntBASIC3.19□□□□□ -1.9
CHMP2AO43633 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.19□□□□□ -1.9
CHMP2AO43633 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.19□□□□□ -1.9
CHMP2AO43633 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
CHMP2AO43633 AC096644.4-201ENST00000563417 2912 ntBASIC3.18□□□□□ -1.9
CHMP2AO43633 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms