Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.5□□□□□ -1.85
CLDN3O15551 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CLDN3O15551 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CLDN3O15551 SNORA11.1-201ENST00000408133 129 ntBASIC3.5□□□□□ -1.85
CLDN3O15551 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.5□□□□□ -1.85
CLDN3O15551 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.5□□□□□ -1.85
CLDN3O15551 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.5□□□□□ -1.85
CLDN3O15551 HMGB3P8-201ENST00000449709 577 ntBASIC3.5□□□□□ -1.85
CLDN3O15551 SLC31A1P1-201ENST00000451221 567 ntBASIC3.5□□□□□ -1.85
CLDN3O15551 ELOCP23-201ENST00000452014 332 ntBASIC3.5□□□□□ -1.85
CLDN3O15551 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.5□□□□□ -1.85
CLDN3O15551 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.5□□□□□ -1.85
CLDN3O15551 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.5□□□□□ -1.85
CLDN3O15551 RN7SL504P-201ENST00000494496 287 ntBASIC3.5□□□□□ -1.85
CLDN3O15551 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.5□□□□□ -1.85
CLDN3O15551 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CLDN3O15551 PHBP14-201ENST00000512887 367 ntBASIC3.5□□□□□ -1.85
CLDN3O15551 MTCO3P27-201ENST00000514397 196 ntBASIC3.5□□□□□ -1.85
CLDN3O15551 RNA5SP468-201ENST00000516782 93 ntBASIC3.5□□□□□ -1.85
CLDN3O15551 SNORA70.24-201ENST00000517233 118 ntBASIC3.5□□□□□ -1.85
CLDN3O15551 AC023632.1-201ENST00000518463 375 ntBASIC3.5□□□□□ -1.85
CLDN3O15551 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.5□□□□□ -1.85
CLDN3O15551 AC019227.1-201ENST00000526902 510 ntBASIC3.5□□□□□ -1.85
CLDN3O15551 AP001317.1-201ENST00000531194 960 ntBASIC3.5□□□□□ -1.85
CLDN3O15551 AC044913.1-201ENST00000557200 430 ntBASIC3.5□□□□□ -1.85
CLDN3O15551 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.5□□□□□ -1.85
CLDN3O15551 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.5□□□□□ -1.85
CLDN3O15551 MIR5004-201ENST00000579078 107 ntBASIC3.5□□□□□ -1.85
CLDN3O15551 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.5□□□□□ -1.85
CLDN3O15551 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CLDN3O15551 AC124312.4-201ENST00000605533 310 ntBASIC3.5□□□□□ -1.85
CLDN3O15551 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.5□□□□□ -1.85
CLDN3O15551 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.5□□□□□ -1.85
CLDN3O15551 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
CLDN3O15551 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.5□□□□□ -1.85
CLDN3O15551 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CLDN3O15551 AC093908.1-201ENST00000623125 8092 ntBASIC3.5□□□□□ -1.85
CLDN3O15551 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
CLDN3O15551 AC021755.1-201ENST00000559747 1447 ntBASIC3.5□□□□□ -1.85
CLDN3O15551 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CLDN3O15551 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.5□□□□□ -1.85
CLDN3O15551 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CLDN3O15551 AC004972.1-201ENST00000623934 2209 ntBASIC3.5□□□□□ -1.85
CLDN3O15551 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
CLDN3O15551 AL645568.2-201ENST00000432815 1337 ntBASIC3.49□□□□□ -1.85
CLDN3O15551 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CLDN3O15551 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
CLDN3O15551 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CLDN3O15551 ZNF826P-207ENST00000622273 1910 ntBASIC3.49□□□□□ -1.85
CLDN3O15551 AC244517.1-201ENST00000606030 2086 ntBASIC3.49□□□□□ -1.85
CLDN3O15551 RNU6-251P-201ENST00000363235 104 ntBASIC3.49□□□□□ -1.85
CLDN3O15551 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CLDN3O15551 RNU6-712P-201ENST00000410558 100 ntBASIC3.49□□□□□ -1.85
CLDN3O15551 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC3.49□□□□□ -1.85
CLDN3O15551 GTF2IP23-201ENST00000423746 351 ntBASIC3.49□□□□□ -1.85
CLDN3O15551 BX890604.2-201ENST00000427883 474 ntBASIC3.49□□□□□ -1.85
CLDN3O15551 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.49□□□□□ -1.85
CLDN3O15551 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.49□□□□□ -1.85
CLDN3O15551 AL353705.1-201ENST00000433468 480 ntBASIC3.49□□□□□ -1.85
CLDN3O15551 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.49□□□□□ -1.85
CLDN3O15551 ISCA1P2-201ENST00000438679 421 ntBASIC3.49□□□□□ -1.85
CLDN3O15551 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.49□□□□□ -1.85
CLDN3O15551 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.49□□□□□ -1.85
CLDN3O15551 RN7SL863P-201ENST00000462370 296 ntBASIC3.49□□□□□ -1.85
CLDN3O15551 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.49□□□□□ -1.85
CLDN3O15551 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CLDN3O15551 snoZ278.1-201ENST00000517059 112 ntBASIC3.49□□□□□ -1.85
CLDN3O15551 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.49□□□□□ -1.85
CLDN3O15551 IGHV3-76-201ENST00000522465 295 ntBASIC3.49□□□□□ -1.85
CLDN3O15551 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CLDN3O15551 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.49□□□□□ -1.85
CLDN3O15551 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.49□□□□□ -1.85
CLDN3O15551 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.49□□□□□ -1.85
CLDN3O15551 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CLDN3O15551 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.49□□□□□ -1.85
CLDN3O15551 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.49□□□□□ -1.85
CLDN3O15551 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.49□□□□□ -1.85
CLDN3O15551 uc_338.25-201ENST00000613756 156 ntBASIC3.49□□□□□ -1.85
CLDN3O15551 AC138932.5-201ENST00000617759 563 ntBASIC3.49□□□□□ -1.85
CLDN3O15551 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.49□□□□□ -1.85
CLDN3O15551 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.49□□□□□ -1.85
CLDN3O15551 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.49□□□□□ -1.85
CLDN3O15551 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CLDN3O15551 AC006927.2-201ENST00000639256 389 ntBASIC3.49□□□□□ -1.85
CLDN3O15551 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.49□□□□□ -1.85
CLDN3O15551 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
CLDN3O15551 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CLDN3O15551 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CLDN3O15551 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.48□□□□□ -1.85
CLDN3O15551 HMGB1P5-201ENST00000255320 642 ntBASIC3.48□□□□□ -1.85
CLDN3O15551 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CLDN3O15551 OR1S2-201ENST00000302592 978 ntBASIC3.48□□□□□ -1.85
CLDN3O15551 SNORD56.3-201ENST00000363507 71 ntBASIC3.48□□□□□ -1.85
CLDN3O15551 AL603865.2-201ENST00000401679 213 ntBASIC3.48□□□□□ -1.85
CLDN3O15551 AL024474.1-201ENST00000404655 591 ntBASIC3.48□□□□□ -1.85
CLDN3O15551 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.48□□□□□ -1.85
CLDN3O15551 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.48□□□□□ -1.85
CLDN3O15551 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CLDN3O15551 BOLA3P4-201ENST00000418151 400 ntBASIC3.48□□□□□ -1.85
CLDN3O15551 MTCO3P1-205ENST00000422088 832 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms