Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 AC008280.2-201ENST00000455473 307 ntBASIC2.24□□□□□ -2.05
HMGB3O15347 AL109741.2-201ENST00000455561 343 ntBASIC2.24□□□□□ -2.05
HMGB3O15347 RPL27AP5-201ENST00000469428 449 ntBASIC2.24□□□□□ -2.05
HMGB3O15347 AC034236.1-201ENST00000469891 373 ntBASIC2.24□□□□□ -2.05
HMGB3O15347 AC117440.1-201ENST00000474107 571 ntBASIC2.24□□□□□ -2.05
HMGB3O15347 AC109925.1-201ENST00000478069 331 ntBASIC2.24□□□□□ -2.05
HMGB3O15347 RN7SL293P-201ENST00000481765 281 ntBASIC2.24□□□□□ -2.05
HMGB3O15347 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
HMGB3O15347 RAC1P5-201ENST00000512182 576 ntBASIC2.24□□□□□ -2.05
HMGB3O15347 AC104057.1-201ENST00000515547 497 ntBASIC2.24□□□□□ -2.05
HMGB3O15347 RN7SKP40-201ENST00000517211 242 ntBASIC2.24□□□□□ -2.05
HMGB3O15347 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC2.24□□□□□ -2.05
HMGB3O15347 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.24□□□□□ -2.05
HMGB3O15347 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.24□□□□□ -2.05
HMGB3O15347 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.24□□□□□ -2.05
HMGB3O15347 AL355836.1-201ENST00000555951 870 ntBASIC2.24□□□□□ -2.05
HMGB3O15347 NCAPGP2-201ENST00000557911 754 ntBASIC2.24□□□□□ -2.05
HMGB3O15347 U73023.1-201ENST00000603134 700 ntBASIC2.24□□□□□ -2.05
HMGB3O15347 SUMO2P14-201ENST00000604488 293 ntBASIC2.24□□□□□ -2.05
HMGB3O15347 AC011374.2-201ENST00000607135 526 ntBASIC2.24□□□□□ -2.05
HMGB3O15347 AC084036.1-201ENST00000609190 508 ntBASIC2.24□□□□□ -2.05
HMGB3O15347 U6.107-201ENST00000637108 79 ntBASIC2.24□□□□□ -2.05
HMGB3O15347 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
HMGB3O15347 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
HMGB3O15347 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
HMGB3O15347 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HMGB3O15347 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
HMGB3O15347 AL365361.1-201ENST00000566942 3481 ntBASIC2.23□□□□□ -2.05
HMGB3O15347 RNU6-989P-201ENST00000362756 107 ntBASIC2.23□□□□□ -2.05
HMGB3O15347 RNA5SP393-201ENST00000363423 117 ntBASIC2.23□□□□□ -2.05
HMGB3O15347 SNORA70.2-201ENST00000364506 135 ntBASIC2.23□□□□□ -2.05
HMGB3O15347 OR52E6-202ENST00000379946 954 ntBASIC2.23□□□□□ -2.05
HMGB3O15347 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.23□□□□□ -2.05
HMGB3O15347 MIR141-201ENST00000384975 95 ntBASIC2.23□□□□□ -2.05
HMGB3O15347 FAT1P1-201ENST00000406588 507 ntBASIC2.23□□□□□ -2.05
HMGB3O15347 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.23□□□□□ -2.05
HMGB3O15347 AL513175.2-201ENST00000422071 443 ntBASIC2.23□□□□□ -2.05
HMGB3O15347 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.23□□□□□ -2.05
HMGB3O15347 AC096632.1-201ENST00000427395 310 ntBASIC2.23□□□□□ -2.05
HMGB3O15347 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC2.23□□□□□ -2.05
HMGB3O15347 KCTD10P1-201ENST00000434203 625 ntBASIC2.23□□□□□ -2.05
HMGB3O15347 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC2.23□□□□□ -2.05
HMGB3O15347 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.23□□□□□ -2.05
HMGB3O15347 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.23□□□□□ -2.05
HMGB3O15347 RN7SL385P-201ENST00000468873 276 ntBASIC2.23□□□□□ -2.05
HMGB3O15347 AC003982.1-202ENST00000469928 248 ntBASIC2.23□□□□□ -2.05
HMGB3O15347 RPS3AP43-201ENST00000479743 781 ntBASIC2.23□□□□□ -2.05
HMGB3O15347 OR5H5P-201ENST00000503164 928 ntBASIC2.23□□□□□ -2.05
HMGB3O15347 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.23□□□□□ -2.05
HMGB3O15347 TBCAP3-201ENST00000512475 312 ntBASIC2.23□□□□□ -2.05
HMGB3O15347 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.23□□□□□ -2.05
HMGB3O15347 PAICSP4-201ENST00000517543 1253 ntBASIC2.23□□□□□ -2.05
HMGB3O15347 AC010306.1-201ENST00000523223 1117 ntBASIC2.23□□□□□ -2.05
HMGB3O15347 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
HMGB3O15347 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC2.23□□□□□ -2.05
HMGB3O15347 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.23□□□□□ -2.05
HMGB3O15347 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC2.23□□□□□ -2.05
HMGB3O15347 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.23□□□□□ -2.05
HMGB3O15347 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.23□□□□□ -2.05
HMGB3O15347 AC090312.2-201ENST00000582687 378 ntBASIC2.23□□□□□ -2.05
HMGB3O15347 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.23□□□□□ -2.05
HMGB3O15347 DPRXP5-201ENST00000604662 539 ntBASIC2.23□□□□□ -2.05
HMGB3O15347 AL162574.2-201ENST00000614618 657 ntBASIC2.23□□□□□ -2.05
HMGB3O15347 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
HMGB3O15347 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.23□□□□□ -2.05
HMGB3O15347 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
HMGB3O15347 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.23□□□□□ -2.05
HMGB3O15347 AC135776.4-201ENST00000624300 1904 ntBASIC2.23□□□□□ -2.05
HMGB3O15347 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HMGB3O15347 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
HMGB3O15347 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.22□□□□□ -2.05
HMGB3O15347 AC092593.1-201ENST00000515413 1815 ntBASIC2.22□□□□□ -2.05
HMGB3O15347 ZNF519P1-201ENST00000449011 1626 ntBASIC2.22□□□□□ -2.05
HMGB3O15347 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
HMGB3O15347 RNU6-761P-201ENST00000384148 107 ntBASIC2.22□□□□□ -2.05
HMGB3O15347 RNU6-1226P-201ENST00000384317 107 ntBASIC2.22□□□□□ -2.05
HMGB3O15347 ANAPC10P1-201ENST00000395991 556 ntBASIC2.22□□□□□ -2.05
HMGB3O15347 SSXP10-201ENST00000402595 565 ntBASIC2.22□□□□□ -2.05
HMGB3O15347 RNU6ATAC-201ENST00000408749 126 ntBASIC2.22□□□□□ -2.05
HMGB3O15347 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.22□□□□□ -2.05
HMGB3O15347 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC2.22□□□□□ -2.05
HMGB3O15347 HMGN2P31-201ENST00000432430 273 ntBASIC2.22□□□□□ -2.05
HMGB3O15347 AC005019.1-201ENST00000436455 431 ntBASIC2.22□□□□□ -2.05
HMGB3O15347 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC2.22□□□□□ -2.05
HMGB3O15347 AC093156.1-201ENST00000440382 670 ntBASIC2.22□□□□□ -2.05
HMGB3O15347 AC004865.1-201ENST00000442276 1003 ntBASIC2.22□□□□□ -2.05
HMGB3O15347 Z75741.1-201ENST00000446793 314 ntBASIC2.22□□□□□ -2.05
HMGB3O15347 AC009961.3-201ENST00000449832 765 ntBASIC2.22□□□□□ -2.05
HMGB3O15347 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
HMGB3O15347 SBDSP1-204ENST00000453858 737 ntBASIC2.22□□□□□ -2.05
HMGB3O15347 AP002812.1-201ENST00000495378 474 ntBASIC2.22□□□□□ -2.05
HMGB3O15347 AC108157.1-201ENST00000510511 539 ntBASIC2.22□□□□□ -2.05
HMGB3O15347 SCARNA13-201ENST00000516672 275 ntBASIC2.22□□□□□ -2.05
HMGB3O15347 SNRPGP16-201ENST00000533275 226 ntBASIC2.22□□□□□ -2.05
HMGB3O15347 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC2.22□□□□□ -2.05
HMGB3O15347 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.22□□□□□ -2.05
HMGB3O15347 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC2.22□□□□□ -2.05
HMGB3O15347 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.22□□□□□ -2.05
HMGB3O15347 AC053481.3-201ENST00000577881 843 ntBASIC2.22□□□□□ -2.05
HMGB3O15347 MIR5194-201ENST00000582634 120 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms