Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AC006111.3-201ENST00000622137 383 ntBASIC3.1□□□□□ -1.91
LSM1O15116 AL353748.2-201ENST00000622148 471 ntBASIC3.1□□□□□ -1.91
LSM1O15116 CR392039.5-201ENST00000623201 510 ntBASIC3.1□□□□□ -1.91
LSM1O15116 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.1□□□□□ -1.91
LSM1O15116 RPS3AP26-201ENST00000398259 784 ntBASIC3.09□□□□□ -1.91
LSM1O15116 AL357075.1-201ENST00000404107 726 ntBASIC3.09□□□□□ -1.91
LSM1O15116 AL139098.1-201ENST00000407291 389 ntBASIC3.09□□□□□ -1.91
LSM1O15116 RNA5SP492-201ENST00000411330 114 ntBASIC3.09□□□□□ -1.91
LSM1O15116 BX323014.1-201ENST00000412876 237 ntBASIC3.09□□□□□ -1.91
LSM1O15116 HSFY4P-201ENST00000415994 1181 ntBASIC3.09□□□□□ -1.91
LSM1O15116 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.09□□□□□ -1.91
LSM1O15116 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.09□□□□□ -1.91
LSM1O15116 MTCO3P2-201ENST00000457365 171 ntBASIC3.09□□□□□ -1.91
LSM1O15116 RNU7-140P-201ENST00000459546 60 ntBASIC3.09□□□□□ -1.91
LSM1O15116 AC021678.1-201ENST00000505195 936 ntBASIC3.09□□□□□ -1.91
LSM1O15116 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.09□□□□□ -1.91
LSM1O15116 AC121161.1-201ENST00000510606 652 ntBASIC3.09□□□□□ -1.91
LSM1O15116 RNU1-45P-201ENST00000517191 141 ntBASIC3.09□□□□□ -1.91
LSM1O15116 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.09□□□□□ -1.91
LSM1O15116 AC022690.1-201ENST00000526681 550 ntBASIC3.09□□□□□ -1.91
LSM1O15116 AC007458.1-201ENST00000542812 373 ntBASIC3.09□□□□□ -1.91
LSM1O15116 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.09□□□□□ -1.91
LSM1O15116 LSM6P2-201ENST00000552208 177 ntBASIC3.09□□□□□ -1.91
LSM1O15116 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.09□□□□□ -1.91
LSM1O15116 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.09□□□□□ -1.91
LSM1O15116 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.09□□□□□ -1.91
LSM1O15116 AL162713.1-201ENST00000604480 262 ntBASIC3.09□□□□□ -1.91
LSM1O15116 AC073657.2-201ENST00000605661 303 ntBASIC3.09□□□□□ -1.91
LSM1O15116 U3.45-201ENST00000607547 219 ntBASIC3.09□□□□□ -1.91
LSM1O15116 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.09□□□□□ -1.91
LSM1O15116 AL591516.1-201ENST00000611326 274 ntBASIC3.09□□□□□ -1.91
LSM1O15116 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.09□□□□□ -1.91
LSM1O15116 AC009318.4-201ENST00000620496 486 ntBASIC3.09□□□□□ -1.91
LSM1O15116 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.09□□□□□ -1.91
LSM1O15116 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
LSM1O15116 AC111188.2-201ENST00000529697 1387 ntBASIC3.09□□□□□ -1.92
LSM1O15116 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
LSM1O15116 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.09□□□□□ -1.92
LSM1O15116 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
LSM1O15116 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
LSM1O15116 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.08□□□□□ -1.92
LSM1O15116 MIR16-2-201ENST00000362117 81 ntBASIC3.08□□□□□ -1.92
LSM1O15116 SNORD116-23-201ENST00000384645 92 ntBASIC3.08□□□□□ -1.92
LSM1O15116 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.08□□□□□ -1.92
LSM1O15116 HMGN1P24-201ENST00000412282 298 ntBASIC3.08□□□□□ -1.92
LSM1O15116 RAP1BP1-201ENST00000412709 553 ntBASIC3.08□□□□□ -1.92
LSM1O15116 RPS29P4-201ENST00000414733 161 ntBASIC3.08□□□□□ -1.92
LSM1O15116 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
LSM1O15116 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.08□□□□□ -1.92
LSM1O15116 RPL36AP36-201ENST00000418616 301 ntBASIC3.08□□□□□ -1.92
LSM1O15116 RPL21P32-201ENST00000419877 477 ntBASIC3.08□□□□□ -1.92
LSM1O15116 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.08□□□□□ -1.92
LSM1O15116 RPL23AP16-201ENST00000441715 421 ntBASIC3.08□□□□□ -1.92
LSM1O15116 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.08□□□□□ -1.92
LSM1O15116 AC044797.1-201ENST00000445744 679 ntBASIC3.08□□□□□ -1.92
LSM1O15116 AL359073.1-201ENST00000448036 403 ntBASIC3.08□□□□□ -1.92
LSM1O15116 MTND2P19-201ENST00000449129 1012 ntBASIC3.08□□□□□ -1.92
LSM1O15116 RN7SL75P-201ENST00000461926 281 ntBASIC3.08□□□□□ -1.92
LSM1O15116 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.08□□□□□ -1.92
LSM1O15116 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.08□□□□□ -1.92
LSM1O15116 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.08□□□□□ -1.92
LSM1O15116 AC026412.2-201ENST00000512270 1075 ntBASIC3.08□□□□□ -1.92
LSM1O15116 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.08□□□□□ -1.92
LSM1O15116 SNORA31.8-201ENST00000516327 108 ntBASIC3.08□□□□□ -1.92
LSM1O15116 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.08□□□□□ -1.92
LSM1O15116 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.08□□□□□ -1.92
LSM1O15116 ARL2BPP5-201ENST00000523141 481 ntBASIC3.08□□□□□ -1.92
LSM1O15116 ZNF705CP-201ENST00000530515 889 ntBASIC3.08□□□□□ -1.92
LSM1O15116 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.08□□□□□ -1.92
LSM1O15116 AC011611.5-201ENST00000552477 578 ntBASIC3.08□□□□□ -1.92
LSM1O15116 RPL21P12-201ENST00000559810 515 ntBASIC3.08□□□□□ -1.92
LSM1O15116 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.08□□□□□ -1.92
LSM1O15116 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.08□□□□□ -1.92
LSM1O15116 MIR2682-201ENST00000580305 110 ntBASIC3.08□□□□□ -1.92
LSM1O15116 COX6CP3-201ENST00000580869 223 ntBASIC3.08□□□□□ -1.92
LSM1O15116 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.08□□□□□ -1.92
LSM1O15116 AC091057.2-201ENST00000602594 792 ntBASIC3.08□□□□□ -1.92
LSM1O15116 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.08□□□□□ -1.92
LSM1O15116 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.08□□□□□ -1.92
LSM1O15116 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.08□□□□□ -1.92
LSM1O15116 AL121594.5-201ENST00000631724 573 ntBASIC3.08□□□□□ -1.92
LSM1O15116 MIR6733-201ENST00000635723 61 ntBASIC3.08□□□□□ -1.92
LSM1O15116 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.08□□□□□ -1.92
LSM1O15116 MTCO1P4-201ENST00000520516 1409 ntBASIC3.08□□□□□ -1.92
LSM1O15116 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
LSM1O15116 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.08□□□□□ -1.92
LSM1O15116 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.08□□□□□ -1.92
LSM1O15116 SGO1P2-201ENST00000429458 1589 ntBASIC3.08□□□□□ -1.92
LSM1O15116 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.08□□□□□ -1.92
LSM1O15116 AC009487.2-201ENST00000420969 6821 ntBASIC3.07□□□□□ -1.92
LSM1O15116 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
LSM1O15116 Z83843.1-201ENST00000604070 3685 ntBASIC3.07□□□□□ -1.92
LSM1O15116 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
LSM1O15116 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LSM1O15116 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
LSM1O15116 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
LSM1O15116 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
LSM1O15116 RNU6-353P-201ENST00000364266 108 ntBASIC3.07□□□□□ -1.92
LSM1O15116 RNU6-115P-201ENST00000364310 107 ntBASIC3.07□□□□□ -1.92
LSM1O15116 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms