Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 SNX5P1-201ENST00000505757 1041 ntBASIC1.91□□□□□ -2.1
CPSF4LA6NMK7 RNU4ATAC17P-201ENST00000517272 120 ntBASIC1.91□□□□□ -2.1
CPSF4LA6NMK7 SEC11B-201ENST00000518383 499 ntBASIC1.91□□□□□ -2.1
CPSF4LA6NMK7 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC1.91□□□□□ -2.1
CPSF4LA6NMK7 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC1.91□□□□□ -2.1
CPSF4LA6NMK7 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.91□□□□□ -2.1
CPSF4LA6NMK7 RPL12P50-201ENST00000603116 116 ntBASIC1.91□□□□□ -2.1
CPSF4LA6NMK7 AC103881.1-201ENST00000603476 538 ntBASIC1.91□□□□□ -2.1
CPSF4LA6NMK7 AC067838.1-201ENST00000606064 577 ntBASIC1.91□□□□□ -2.1
CPSF4LA6NMK7 AL450472.3-201ENST00000615578 367 ntBASIC1.91□□□□□ -2.1
CPSF4LA6NMK7 MIR4278-201ENST00000636094 69 ntBASIC1.91□□□□□ -2.1
CPSF4LA6NMK7 AC132825.8-201ENST00000640783 297 ntBASIC1.91□□□□□ -2.1
CPSF4LA6NMK7 AP000553.5-201ENST00000641933 54 ntBASIC1.91□□□□□ -2.1
CPSF4LA6NMK7 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.91□□□□□ -2.1
CPSF4LA6NMK7 AC092435.3-201ENST00000565538 3654 ntBASIC1.9□□□□□ -2.1
CPSF4LA6NMK7 AC046144.1-201ENST00000478559 1853 ntBASIC1.9□□□□□ -2.1
CPSF4LA6NMK7 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CPSF4LA6NMK7 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CPSF4LA6NMK7 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC1.9□□□□□ -2.11
CPSF4LA6NMK7 RNA5SP138-201ENST00000365098 114 ntBASIC1.9□□□□□ -2.11
CPSF4LA6NMK7 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
CPSF4LA6NMK7 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CPSF4LA6NMK7 RNA5SP492-201ENST00000411330 114 ntBASIC1.9□□□□□ -2.11
CPSF4LA6NMK7 AC007064.1-201ENST00000412238 351 ntBASIC1.9□□□□□ -2.11
CPSF4LA6NMK7 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC1.9□□□□□ -2.11
CPSF4LA6NMK7 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC1.9□□□□□ -2.11
CPSF4LA6NMK7 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.9□□□□□ -2.11
CPSF4LA6NMK7 AC005189.1-201ENST00000431286 310 ntBASIC1.9□□□□□ -2.11
CPSF4LA6NMK7 HSD52-202ENST00000436225 772 ntTSL 3 BASIC1.9□□□□□ -2.11
CPSF4LA6NMK7 AC093392.2-201ENST00000450682 337 ntBASIC1.9□□□□□ -2.11
CPSF4LA6NMK7 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.9□□□□□ -2.11
CPSF4LA6NMK7 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.9□□□□□ -2.11
CPSF4LA6NMK7 AC012170.1-201ENST00000495139 359 ntBASIC1.9□□□□□ -2.11
CPSF4LA6NMK7 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CPSF4LA6NMK7 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
CPSF4LA6NMK7 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC1.9□□□□□ -2.11
CPSF4LA6NMK7 RN7SKP283-201ENST00000517197 270 ntBASIC1.9□□□□□ -2.11
CPSF4LA6NMK7 AP004242.1-201ENST00000533701 349 ntBASIC1.9□□□□□ -2.11
CPSF4LA6NMK7 HSPE1P20-201ENST00000538133 289 ntBASIC1.9□□□□□ -2.11
CPSF4LA6NMK7 SNRPGP18-201ENST00000553000 214 ntBASIC1.9□□□□□ -2.11
CPSF4LA6NMK7 MIR4716-201ENST00000579628 84 ntBASIC1.9□□□□□ -2.11
CPSF4LA6NMK7 AP001029.3-201ENST00000588063 596 ntBASIC1.9□□□□□ -2.11
CPSF4LA6NMK7 AL096803.3-201ENST00000609032 532 ntBASIC1.9□□□□□ -2.11
CPSF4LA6NMK7 AC010378.1-201ENST00000619270 362 ntBASIC1.9□□□□□ -2.11
CPSF4LA6NMK7 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC1.9□□□□□ -2.11
CPSF4LA6NMK7 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.9□□□□□ -2.11
CPSF4LA6NMK7 AC007256.1-201ENST00000392253 2765 ntBASIC1.9□□□□□ -2.11
CPSF4LA6NMK7 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CPSF4LA6NMK7 AC004925.1-201ENST00000624256 2706 ntBASIC1.89□□□□□ -2.11
CPSF4LA6NMK7 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
CPSF4LA6NMK7 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC1.89□□□□□ -2.11
CPSF4LA6NMK7 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.89□□□□□ -2.11
CPSF4LA6NMK7 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CPSF4LA6NMK7 RNU1-109P-201ENST00000383960 147 ntBASIC1.89□□□□□ -2.11
CPSF4LA6NMK7 NPM1P13-201ENST00000452663 865 ntBASIC1.89□□□□□ -2.11
CPSF4LA6NMK7 HSPE1P6-201ENST00000479457 291 ntBASIC1.89□□□□□ -2.11
CPSF4LA6NMK7 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC1.89□□□□□ -2.11
CPSF4LA6NMK7 RNU2-58P-201ENST00000516403 183 ntBASIC1.89□□□□□ -2.11
CPSF4LA6NMK7 RNU1-103P-201ENST00000516502 125 ntBASIC1.89□□□□□ -2.11
CPSF4LA6NMK7 AC087276.1-201ENST00000529659 480 ntBASIC1.89□□□□□ -2.11
CPSF4LA6NMK7 AP001317.1-201ENST00000531194 960 ntBASIC1.89□□□□□ -2.11
CPSF4LA6NMK7 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC1.89□□□□□ -2.11
CPSF4LA6NMK7 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.89□□□□□ -2.11
CPSF4LA6NMK7 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC1.89□□□□□ -2.11
CPSF4LA6NMK7 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.89□□□□□ -2.11
CPSF4LA6NMK7 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC1.89□□□□□ -2.11
CPSF4LA6NMK7 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC1.89□□□□□ -2.11
CPSF4LA6NMK7 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC1.89□□□□□ -2.11
CPSF4LA6NMK7 AC010200.2-201ENST00000605098 235 ntBASIC1.89□□□□□ -2.11
CPSF4LA6NMK7 AC090617.7-201ENST00000623952 126 ntBASIC1.89□□□□□ -2.11
CPSF4LA6NMK7 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.89□□□□□ -2.11
CPSF4LA6NMK7 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CPSF4LA6NMK7 MTND4P1-201ENST00000457501 1466 ntBASIC1.88□□□□□ -2.11
CPSF4LA6NMK7 MAPK10-322ENST00000641485 4530 ntBASIC1.88□□□□□ -2.11
CPSF4LA6NMK7 XGY1-201ENST00000381172 446 ntBASIC1.88□□□□□ -2.11
CPSF4LA6NMK7 MIR124-3-201ENST00000384866 87 ntBASIC1.88□□□□□ -2.11
CPSF4LA6NMK7 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CPSF4LA6NMK7 AL024474.1-201ENST00000404655 591 ntBASIC1.88□□□□□ -2.11
CPSF4LA6NMK7 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.88□□□□□ -2.11
CPSF4LA6NMK7 AC009965.2-201ENST00000425328 970 ntBASIC1.88□□□□□ -2.11
CPSF4LA6NMK7 AC027124.2-201ENST00000428249 105 ntBASIC1.88□□□□□ -2.11
CPSF4LA6NMK7 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CPSF4LA6NMK7 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.88□□□□□ -2.11
CPSF4LA6NMK7 HMGN1P5-201ENST00000448591 263 ntBASIC1.88□□□□□ -2.11
CPSF4LA6NMK7 AL354710.1-201ENST00000453641 246 ntBASIC1.88□□□□□ -2.11
CPSF4LA6NMK7 AC104308.1-201ENST00000454621 333 ntBASIC1.88□□□□□ -2.11
CPSF4LA6NMK7 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.88□□□□□ -2.11
CPSF4LA6NMK7 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.88□□□□□ -2.11
CPSF4LA6NMK7 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC1.88□□□□□ -2.11
CPSF4LA6NMK7 AC026464.5-201ENST00000562497 722 ntBASIC1.88□□□□□ -2.11
CPSF4LA6NMK7 MTCO3P24-201ENST00000572729 782 ntBASIC1.88□□□□□ -2.11
CPSF4LA6NMK7 ISCA1P3-201ENST00000577104 373 ntBASIC1.88□□□□□ -2.11
CPSF4LA6NMK7 AC011468.4-201ENST00000603942 409 ntBASIC1.88□□□□□ -2.11
CPSF4LA6NMK7 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CPSF4LA6NMK7 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CPSF4LA6NMK7 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CPSF4LA6NMK7 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CPSF4LA6NMK7 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC1.87□□□□□ -2.11
CPSF4LA6NMK7 AC011978.2-201ENST00000569835 2054 ntBASIC1.87□□□□□ -2.11
CPSF4LA6NMK7 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms