Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.14□□□□□ -1.75
MBD3L3A6NE82 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC4.14□□□□□ -1.75
MBD3L3A6NE82 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
MBD3L3A6NE82 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
MBD3L3A6NE82 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.14□□□□□ -1.75
MBD3L3A6NE82 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.14□□□□□ -1.75
MBD3L3A6NE82 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
MBD3L3A6NE82 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
MBD3L3A6NE82 AC015813.6-201ENST00000624409 5808 ntBASIC4.14□□□□□ -1.75
MBD3L3A6NE82 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
MBD3L3A6NE82 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
MBD3L3A6NE82 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
MBD3L3A6NE82 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
MBD3L3A6NE82 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
MBD3L3A6NE82 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
MBD3L3A6NE82 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.13□□□□□ -1.75
MBD3L3A6NE82 RNA5SP235-201ENST00000365411 114 ntBASIC4.13□□□□□ -1.75
MBD3L3A6NE82 Y_RNA.372-201ENST00000365599 102 ntBASIC4.13□□□□□ -1.75
MBD3L3A6NE82 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
MBD3L3A6NE82 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.13□□□□□ -1.75
MBD3L3A6NE82 SDHCP2-201ENST00000398565 501 ntBASIC4.13□□□□□ -1.75
MBD3L3A6NE82 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
MBD3L3A6NE82 ARL4AP5-201ENST00000404372 599 ntBASIC4.13□□□□□ -1.75
MBD3L3A6NE82 AL590002.1-201ENST00000406554 418 ntBASIC4.13□□□□□ -1.75
MBD3L3A6NE82 RNU4-65P-201ENST00000410473 140 ntBASIC4.13□□□□□ -1.75
MBD3L3A6NE82 MTCO3P12-201ENST00000416718 547 ntBASIC4.13□□□□□ -1.75
MBD3L3A6NE82 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.13□□□□□ -1.75
MBD3L3A6NE82 AC099677.1-201ENST00000420575 175 ntBASIC4.13□□□□□ -1.75
MBD3L3A6NE82 AC244098.2-201ENST00000422068 99 ntBASIC4.13□□□□□ -1.75
MBD3L3A6NE82 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.13□□□□□ -1.75
MBD3L3A6NE82 AL139415.2-201ENST00000431968 163 ntBASIC4.13□□□□□ -1.75
MBD3L3A6NE82 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.13□□□□□ -1.75
MBD3L3A6NE82 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.13□□□□□ -1.75
MBD3L3A6NE82 AC012512.1-201ENST00000446594 718 ntBASIC4.13□□□□□ -1.75
MBD3L3A6NE82 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.13□□□□□ -1.75
MBD3L3A6NE82 AC132479.1-201ENST00000449160 144 ntBASIC4.13□□□□□ -1.75
MBD3L3A6NE82 NANOGP10-201ENST00000453325 895 ntBASIC4.13□□□□□ -1.75
MBD3L3A6NE82 RPS23P7-201ENST00000466210 444 ntBASIC4.13□□□□□ -1.75
MBD3L3A6NE82 AL049714.1-201ENST00000466686 347 ntBASIC4.13□□□□□ -1.75
MBD3L3A6NE82 RN7SL385P-201ENST00000468873 276 ntBASIC4.13□□□□□ -1.75
MBD3L3A6NE82 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.13□□□□□ -1.75
MBD3L3A6NE82 AC079382.1-201ENST00000493346 557 ntBASIC4.13□□□□□ -1.75
MBD3L3A6NE82 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.13□□□□□ -1.75
MBD3L3A6NE82 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.13□□□□□ -1.75
MBD3L3A6NE82 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.13□□□□□ -1.75
MBD3L3A6NE82 RNA5SP230-201ENST00000517039 122 ntBASIC4.13□□□□□ -1.75
MBD3L3A6NE82 AP001893.2-201ENST00000526949 202 ntBASIC4.13□□□□□ -1.75
MBD3L3A6NE82 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.13□□□□□ -1.75
MBD3L3A6NE82 MIR4277-201ENST00000578298 84 ntBASIC4.13□□□□□ -1.75
MBD3L3A6NE82 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.13□□□□□ -1.75
MBD3L3A6NE82 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.13□□□□□ -1.75
MBD3L3A6NE82 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.13□□□□□ -1.75
MBD3L3A6NE82 AL136363.1-201ENST00000605349 337 ntBASIC4.13□□□□□ -1.75
MBD3L3A6NE82 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.13□□□□□ -1.75
MBD3L3A6NE82 AC092954.2-201ENST00000609103 430 ntBASIC4.13□□□□□ -1.75
MBD3L3A6NE82 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.13□□□□□ -1.75
MBD3L3A6NE82 AL136313.1-201ENST00000624804 202 ntBASIC4.13□□□□□ -1.75
MBD3L3A6NE82 AC019226.1-201ENST00000625666 515 ntBASIC4.13□□□□□ -1.75
MBD3L3A6NE82 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
MBD3L3A6NE82 AC090337.1-201ENST00000579651 2074 ntBASIC4.13□□□□□ -1.75
MBD3L3A6NE82 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
MBD3L3A6NE82 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
MBD3L3A6NE82 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
MBD3L3A6NE82 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.13□□□□□ -1.75
MBD3L3A6NE82 AC139713.2-214ENST00000642059 1811 ntBASIC4.13□□□□□ -1.75
MBD3L3A6NE82 AC108467.2-201ENST00000617640 1597 ntBASIC4.13□□□□□ -1.75
MBD3L3A6NE82 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
MBD3L3A6NE82 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
MBD3L3A6NE82 AL136164.3-201ENST00000624429 3978 ntBASIC4.13□□□□□ -1.75
MBD3L3A6NE82 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.13□□□□□ -1.75
MBD3L3A6NE82 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
MBD3L3A6NE82 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
MBD3L3A6NE82 AL391684.1-202ENST00000641293 1636 ntBASIC4.13□□□□□ -1.75
MBD3L3A6NE82 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.13□□□□□ -1.75
MBD3L3A6NE82 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
MBD3L3A6NE82 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.12□□□□□ -1.75
MBD3L3A6NE82 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.12□□□□□ -1.75
MBD3L3A6NE82 Z95331.1-201ENST00000623075 23112 ntBASIC4.12□□□□□ -1.75
MBD3L3A6NE82 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
MBD3L3A6NE82 AC011755.1-201ENST00000623763 2049 ntBASIC4.12□□□□□ -1.75
MBD3L3A6NE82 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
MBD3L3A6NE82 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.12□□□□□ -1.75
MBD3L3A6NE82 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.12□□□□□ -1.75
MBD3L3A6NE82 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.12□□□□□ -1.75
MBD3L3A6NE82 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
MBD3L3A6NE82 RNA5SP447-201ENST00000363749 119 ntBASIC4.12□□□□□ -1.75
MBD3L3A6NE82 RNU6-1074P-201ENST00000383995 104 ntBASIC4.12□□□□□ -1.75
MBD3L3A6NE82 CALM2P3-201ENST00000400429 449 ntBASIC4.12□□□□□ -1.75
MBD3L3A6NE82 AL356967.1-201ENST00000406305 431 ntBASIC4.12□□□□□ -1.75
MBD3L3A6NE82 RNU2-43P-201ENST00000410306 190 ntBASIC4.12□□□□□ -1.75
MBD3L3A6NE82 RN7SKP159-201ENST00000410657 292 ntBASIC4.12□□□□□ -1.75
MBD3L3A6NE82 E2F6P2-201ENST00000420708 748 ntBASIC4.12□□□□□ -1.75
MBD3L3A6NE82 RWDD4P2-201ENST00000426392 563 ntBASIC4.12□□□□□ -1.75
MBD3L3A6NE82 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.12□□□□□ -1.75
MBD3L3A6NE82 AL162388.1-201ENST00000450912 352 ntBASIC4.12□□□□□ -1.75
MBD3L3A6NE82 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.12□□□□□ -1.75
MBD3L3A6NE82 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.12□□□□□ -1.75
MBD3L3A6NE82 SCARNA10-201ENST00000459255 330 ntBASIC4.12□□□□□ -1.75
MBD3L3A6NE82 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
MBD3L3A6NE82 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms